RNA–Protein interactions for RNA: ENST00000399004.6

GIN1-201, Transcript of gypsy retrotransposon integrase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GIN1, Length 3,229 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-201ENST00000399004 TFR2Q9UP52 801 aa10.11□□□□□ -0.79
GIN1-201ENST00000399004 IQSEC3Q9UPP2 1182 aaPredicted RBP10.11□□□□□ -0.79
GIN1-201ENST00000399004 NFE2L3Q9Y4A8 694 aa10.11□□□□□ -0.79
GIN1-201ENST00000399004 ZNF335Q9H4Z2 1342 aaPredicted RBP10.11□□□□□ -0.79
GIN1-201ENST00000399004 SNAP23O00161 211 aa10.11□□□□□ -0.79
GIN1-201ENST00000399004 PCP11498 1178 aaKnown RBP10.11□□□□□ -0.79
GIN1-201ENST00000399004 SARSP49591 514 aaKnown RBP10.11□□□□□ -0.79
GIN1-201ENST00000399004 PDE4BQ07343 736 aa10.11□□□□□ -0.79
GIN1-201ENST00000399004 TRDNQ13061 729 aa10.11□□□□□ -0.79
GIN1-201ENST00000399004 TRIM29Q14134 588 aa10.11□□□□□ -0.79
GIN1-201ENST00000399004 PPP2R5BQ15173 497 aa10.11□□□□□ -0.79
GIN1-201ENST00000399004 ZNF569Q5MCW4 686 aa10.11□□□□□ -0.79
GIN1-201ENST00000399004 SLC10A5Q5PT55 438 aa10.11□□□□□ -0.79
GIN1-201ENST00000399004 TTC19Q6DKK2 380 aaPredicted RBP10.11□□□□□ -0.79
GIN1-201ENST00000399004 PCDHA5Q9Y5H7 936 aa10.11□□□□□ -0.79
GIN1-201ENST00000399004 PATL2C9JE40 543 aaKnown RBP10.11□□□□□ -0.79
GIN1-201ENST00000399004 FMNL1O95466 1100 aaPredicted RBP10.11□□□□□ -0.79
GIN1-201ENST00000399004 GNAT2P19087 354 aa10.11□□□□□ -0.79
GIN1-201ENST00000399004 GPTP24298 496 aa10.11□□□□□ -0.79
GIN1-201ENST00000399004 VPS37DQ86XT2 251 aa10.11□□□□□ -0.79
GIN1-201ENST00000399004 ANKRD18BA2A2Z9 1011 aa10.1□□□□□ -0.79
GIN1-201ENST00000399004 POLR2DO15514 142 aaKnown RBP10.1□□□□□ -0.79
GIN1-201ENST00000399004 SLC5A1P13866 664 aa10.1□□□□□ -0.79
GIN1-201ENST00000399004 MYL5Q02045 173 aa10.1□□□□□ -0.79
GIN1-201ENST00000399004 PARP10Q53GL7 1025 aa10.1□□□□□ -0.79
GIN1-201ENST00000399004 CCDC102BQ68D86 513 aa10.1□□□□□ -0.79
GIN1-201ENST00000399004 GPATCH11Q8N954 259 aa10.1□□□□□ -0.79
GIN1-201ENST00000399004 CDC5LQ99459 802 aaKnown RBP10.1□□□□□ -0.79
GIN1-201ENST00000399004 ARFGEF1Q9Y6D6 1849 aa10.1□□□□□ -0.79
GIN1-201ENST00000399004 ENC1O14682 589 aa10.1□□□□□ -0.79
GIN1-201ENST00000399004 RANBP6O60518 1105 aaKnown RBP10.1□□□□□ -0.79
GIN1-201ENST00000399004 PDE6AP16499 860 aa10.1□□□□□ -0.79
GIN1-201ENST00000399004 IFNAR1P17181 557 aa10.1□□□□□ -0.79
GIN1-201ENST00000399004 CYP2C19P33261 490 aa10.1□□□□□ -0.79
GIN1-201ENST00000399004 NLRP12P59046 1061 aa10.1□□□□□ -0.79
GIN1-201ENST00000399004 FUT2Q10981 343 aa10.1□□□□□ -0.79
GIN1-201ENST00000399004 APOA5Q6Q788 366 aa10.1□□□□□ -0.79
GIN1-201ENST00000399004 LEKR1Q6ZMV7 388 aa10.1□□□□□ -0.79
GIN1-201ENST00000399004 GSPT2Q8IYD1 628 aaKnown RBP10.1□□□□□ -0.79
GIN1-201ENST00000399004 H3BQF6 201 aa10.09□□□□□ -0.79
GIN1-201ENST00000399004 PRR29P0C7W0 189 aa10.09□□□□□ -0.79
GIN1-201ENST00000399004 CDC25AP30304 524 aa10.09□□□□□ -0.79
GIN1-201ENST00000399004 METAP2P50579 478 aaKnown RBP eCLIP10.09□□□□□ -0.79
GIN1-201ENST00000399004 SEC23AQ15436 765 aa10.09□□□□□ -0.79
GIN1-201ENST00000399004 SYNE4Q8N205 404 aa10.09□□□□□ -0.79
GIN1-201ENST00000399004 DRC1Q96MC2 740 aa10.09□□□□□ -0.79
GIN1-201ENST00000399004 PSMB7Q99436 277 aa10.09□□□□□ -0.79
GIN1-201ENST00000399004 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.09□□□□□ -0.79
GIN1-201ENST00000399004 KIF2AO00139 706 aaPredicted RBP10.09□□□□□ -0.79
GIN1-201ENST00000399004 ZNF213O14771 459 aa10.09□□□□□ -0.79
GIN1-201ENST00000399004 H2AFXP16104 143 aaPredicted RBP10.09□□□□□ -0.79
GIN1-201ENST00000399004 SF3B3Q15393 1217 aaKnown RBP10.09□□□□□ -0.79
GIN1-201ENST00000399004 JAKMIP3Q5VZ66 844 aa10.09□□□□□ -0.79
GIN1-201ENST00000399004 CLEC4GQ6UXB4 293 aa10.09□□□□□ -0.79
GIN1-201ENST00000399004 CNNM2Q9H8M5 875 aa10.09□□□□□ -0.79
GIN1-201ENST00000399004 TBC1D2BQ9UPU7 963 aa10.09□□□□□ -0.79
GIN1-201ENST00000399004 FAN1Q9Y2M0 1017 aa10.09□□□□□ -0.79
GIN1-201ENST00000399004 CNTNAP4Q9C0A0 1308 aa10.09□□□□□ -0.79
GIN1-201ENST00000399004 GSG1L2A8MUP6 293 aa10.09□□□□□ -0.79
GIN1-201ENST00000399004 ABL1P00519 1130 aa10.09□□□□□ -0.79
GIN1-201ENST00000399004 FECHP22830 423 aa10.09□□□□□ -0.79
GIN1-201ENST00000399004 MATR3P43243 847 aaKnown RBP eCLIP10.09□□□□□ -0.79
GIN1-201ENST00000399004 USP49Q70CQ1 688 aa10.09□□□□□ -0.79
GIN1-201ENST00000399004 ACRBPQ8NEB7 543 aa10.09□□□□□ -0.79
GIN1-201ENST00000399004 TNFRSF25Q93038 417 aa10.09□□□□□ -0.79
GIN1-201ENST00000399004 PARP3Q9Y6F1 533 aa10.09□□□□□ -0.79
GIN1-201ENST00000399004 SPATA31A5Q5VU36 1347 aa10.09□□□□□ -0.79
GIN1-201ENST00000399004 SPATA31A7Q8IWB4 1347 aa10.09□□□□□ -0.79
GIN1-201ENST00000399004 PSME4Q14997 1843 aa10.08□□□□□ -0.8
GIN1-201ENST00000399004 TEX33O43247 280 aa10.08□□□□□ -0.8
GIN1-201ENST00000399004 TADA3O75528 432 aa10.08□□□□□ -0.8
GIN1-201ENST00000399004 CDKL5O76039 1030 aa10.08□□□□□ -0.8
GIN1-201ENST00000399004 TBC1D8O95759 1140 aa10.08□□□□□ -0.8
GIN1-201ENST00000399004 MYCNP04198 464 aaPredicted RBP10.08□□□□□ -0.8
GIN1-201ENST00000399004 TBX2Q13207 712 aaPredicted RBP10.08□□□□□ -0.8
GIN1-201ENST00000399004 E2F4Q16254 413 aa10.08□□□□□ -0.8
GIN1-201ENST00000399004 CC2D1AQ6P1N0 951 aaPredicted RBP10.08□□□□□ -0.8
GIN1-201ENST00000399004 RASSF8Q8NHQ8 419 aa10.08□□□□□ -0.8
GIN1-201ENST00000399004 RIN2Q8WYP3 895 aaPredicted RBP10.08□□□□□ -0.8
GIN1-201ENST00000399004 FOXP1Q9H334 677 aaPredicted RBP10.08□□□□□ -0.8
GIN1-201ENST00000399004 MRPL44Q9H9J2 332 aaKnown RBP10.08□□□□□ -0.8
GIN1-201ENST00000399004 FEZ2Q9UHY8 353 aaPredicted RBP10.08□□□□□ -0.8
GIN1-201ENST00000399004 VWA3AA6NCI4 1184 aa10.08□□□□□ -0.8
GIN1-201ENST00000399004 IRS4O14654 1257 aaPredicted RBP10.08□□□□□ -0.8
GIN1-201ENST00000399004 ZSCAN12O43309 604 aa10.08□□□□□ -0.8
GIN1-201ENST00000399004 SF3A3Q12874 501 aaKnown RBP eCLIP10.08□□□□□ -0.8
GIN1-201ENST00000399004 LONRF2Q1L5Z9 754 aa10.08□□□□□ -0.8
GIN1-201ENST00000399004 CCDC93Q567U6 631 aa10.08□□□□□ -0.8
GIN1-201ENST00000399004 HSP90B2PQ58FF3 399 aa10.08□□□□□ -0.8
GIN1-201ENST00000399004 KRT40Q6A162 431 aa10.08□□□□□ -0.8
GIN1-201ENST00000399004 FAM89AQ96GI7 184 aa10.08□□□□□ -0.8
GIN1-201ENST00000399004 PLIN2Q99541 437 aa10.08□□□□□ -0.8
GIN1-201ENST00000399004 ADAM21Q9UKJ8 722 aa10.08□□□□□ -0.8
GIN1-201ENST00000399004 ZBTB1Q9Y2K1 713 aa10.08□□□□□ -0.8
GIN1-201ENST00000399004 PSDA5PKW4 1024 aaPredicted RBP10.07□□□□□ -0.8
GIN1-201ENST00000399004 BTBD18B2RXH4 712 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 MYO1CO00159 1063 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 CHMP4BP1P59074 171 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 CTDSPL2Q05D32 466 aa10.07□□□□□ -0.8
GIN1-201ENST00000399004 FMR1Q06787 632 aaKnown RBP eCLIP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms