RNA–Protein interactions for RNA: ENST00000397238.6

AGAP3-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-202ENST00000397238 SLIT3O75094 1523 aa22.44■■□□□ 1.18
AGAP3-202ENST00000397238 ERCC5P28715 1186 aaPredicted RBP22.44■■□□□ 1.18
AGAP3-202ENST00000397238 KRT9P35527 623 aa22.44■■□□□ 1.18
AGAP3-202ENST00000397238 NOM1Q5C9Z4 860 aaKnown RBP22.44■■□□□ 1.18
AGAP3-202ENST00000397238 RRAGBQ5VZM2 374 aa22.44■■□□□ 1.18
AGAP3-202ENST00000397238 WASF1Q92558 559 aa22.44■■□□□ 1.18
AGAP3-202ENST00000397238 SYMPKQ92797 1274 aaKnown RBP22.44■■□□□ 1.18
AGAP3-202ENST00000397238 EEF2KMTQ96G04 330 aa22.44■■□□□ 1.18
AGAP3-202ENST00000397238 PAGE5Q96GU1 130 aa22.44■■□□□ 1.18
AGAP3-202ENST00000397238 SRPRBQ9Y5M8 271 aaKnown RBP22.44■■□□□ 1.18
AGAP3-202ENST00000397238 EIF3CLB5ME19 914 aaKnown RBP22.43■■□□□ 1.18
AGAP3-202ENST00000397238 MFSD6Q6ZSS7 791 aa22.43■■□□□ 1.18
AGAP3-202ENST00000397238 CNGA4Q8IV77 575 aa22.43■■□□□ 1.18
AGAP3-202ENST00000397238 MAGEB6Q8N7X4 407 aa22.43■■□□□ 1.18
AGAP3-202ENST00000397238 EIF3CQ99613 913 aaKnown RBP22.43■■□□□ 1.18
AGAP3-202ENST00000397238 TACC3Q9Y6A5 838 aa22.43■■□□□ 1.18
AGAP3-202ENST00000397238 RNF40O75150 1001 aa22.43■■□□□ 1.18
AGAP3-202ENST00000397238 TDO2P48775 406 aa22.43■■□□□ 1.18
AGAP3-202ENST00000397238 DPYDQ12882 1025 aa22.43■■□□□ 1.18
AGAP3-202ENST00000397238 WTAPQ15007 396 aa22.43■■□□□ 1.18
AGAP3-202ENST00000397238 NT5DC1Q5TFE4 455 aa22.43■■□□□ 1.18
AGAP3-202ENST00000397238 KANK3Q6NY19 840 aa22.43■■□□□ 1.18
AGAP3-202ENST00000397238 LRRC31Q6UY01 552 aa22.43■■□□□ 1.18
AGAP3-202ENST00000397238 ZCRB1Q8TBF4 217 aaKnown RBP22.43■■□□□ 1.18
AGAP3-202ENST00000397238 PIP4K2BP78356 416 aa22.42■■□□□ 1.18
AGAP3-202ENST00000397238 EARS2Q5JPH6 523 aaKnown RBP22.42■■□□□ 1.18
AGAP3-202ENST00000397238 NAA15Q9BXJ9 866 aaKnown RBP22.42■■□□□ 1.18
AGAP3-202ENST00000397238 USP5P45974 858 aa22.42■■□□□ 1.18
AGAP3-202ENST00000397238 IFNL3Q8IZI9 196 aa22.42■■□□□ 1.18
AGAP3-202ENST00000397238 TRIML1Q8N9V2 468 aa22.42■■□□□ 1.18
AGAP3-202ENST00000397238 GREM2Q9H772 168 aa22.42■■□□□ 1.18
AGAP3-202ENST00000397238 TTF2Q9UNY4 1162 aaKnown RBP22.42■■□□□ 1.18
AGAP3-202ENST00000397238 ZNF142P52746 1687 aaPredicted RBP22.42■■□□□ 1.18
AGAP3-202ENST00000397238 ERICH2A1L162 156 aa22.42■■□□□ 1.18
AGAP3-202ENST00000397238 IFNAR1P17181 557 aa22.42■■□□□ 1.18
AGAP3-202ENST00000397238 CCDC148Q8NFR7 591 aa22.42■■□□□ 1.18
AGAP3-202ENST00000397238 ITGA6P23229 1130 aa22.41■■□□□ 1.18
AGAP3-202ENST00000397238 KRT31Q15323 416 aa22.41■■□□□ 1.18
AGAP3-202ENST00000397238 MIGA1Q8NAN2 632 aa22.41■■□□□ 1.18
AGAP3-202ENST00000397238 WDR19Q8NEZ3 1342 aa22.41■■□□□ 1.18
AGAP3-202ENST00000397238 STRBPQ96SI9 672 aaKnown RBP22.41■■□□□ 1.18
AGAP3-202ENST00000397238 GBP3Q9H0R5 595 aa22.41■■□□□ 1.18
AGAP3-202ENST00000397238 EPB41L4AQ9HCS5 686 aaPredicted RBP22.41■■□□□ 1.18
AGAP3-202ENST00000397238 TRIM75PA6NK02 468 aa22.4■■□□□ 1.18
AGAP3-202ENST00000397238 MINDY4BA8MYZ0 360 aa22.4■■□□□ 1.18
AGAP3-202ENST00000397238 MRPS25P82663 173 aaKnown RBP22.4■■□□□ 1.18
AGAP3-202ENST00000397238 PACS2Q86VP3 889 aa22.4■■□□□ 1.18
AGAP3-202ENST00000397238 FAM71BQ8TC56 605 aa22.4■■□□□ 1.18
AGAP3-202ENST00000397238 ABHD10Q9NUJ1 306 aa22.4■■□□□ 1.18
AGAP3-202ENST00000397238 CEP131Q9UPN4 1083 aa22.4■■□□□ 1.18
AGAP3-202ENST00000397238 WNT7AO00755 349 aa22.4■■□□□ 1.18
AGAP3-202ENST00000397238 GTF2A1P52655 376 aaPredicted RBP22.4■■□□□ 1.18
AGAP3-202ENST00000397238 TTC31Q49AM3 519 aaPredicted RBP22.4■■□□□ 1.18
AGAP3-202ENST00000397238 CTAGE1Q96RT6 745 aa22.4■■□□□ 1.18
AGAP3-202ENST00000397238 FKBP15Q5T1M5 1219 aa22.4■■□□□ 1.18
AGAP3-202ENST00000397238 ACBD3Q9H3P7 528 aa22.4■■□□□ 1.18
AGAP3-202ENST00000397238 UBXN1Q04323 297 aa22.39■■□□□ 1.18
AGAP3-202ENST00000397238 CUL4BQ13620 913 aa22.39■■□□□ 1.18
AGAP3-202ENST00000397238 SGMS1Q86VZ5 419 aa22.39■■□□□ 1.18
AGAP3-202ENST00000397238 TMTC1Q8IUR5 882 aa22.39■■□□□ 1.18
AGAP3-202ENST00000397238 GPIHBP1Q8IV16 184 aa22.39■■□□□ 1.18
AGAP3-202ENST00000397238 FOXP1Q9H334 677 aaPredicted RBP22.39■■□□□ 1.18
AGAP3-202ENST00000397238 ZNF335Q9H4Z2 1342 aaPredicted RBP22.39■■□□□ 1.18
AGAP3-202ENST00000397238 NOP2P46087 812 aaKnown RBP22.39■■□□□ 1.17
AGAP3-202ENST00000397238 WHAMMP3Q1A5X7 153 aa22.39■■□□□ 1.17
AGAP3-202ENST00000397238 CRACR2BQ8N4Y2 399 aaPredicted RBP22.39■■□□□ 1.17
AGAP3-202ENST00000397238 CAGE1Q8TC20 777 aa22.39■■□□□ 1.17
AGAP3-202ENST00000397238 PPP1R3GB7ZBB8 358 aa22.38■■□□□ 1.17
AGAP3-202ENST00000397238 ARHGAP25P42331 645 aa22.38■■□□□ 1.17
AGAP3-202ENST00000397238 MMS19Q96T76 1030 aa22.38■■□□□ 1.17
AGAP3-202ENST00000397238 SMIM22K7EJ46 135 aa22.38■■□□□ 1.17
AGAP3-202ENST00000397238 DEXIO95424 95 aa22.38■■□□□ 1.17
AGAP3-202ENST00000397238 SART3Q15020 963 aaKnown RBP22.38■■□□□ 1.17
AGAP3-202ENST00000397238 AKNAD1Q5T1N1 836 aa22.38■■□□□ 1.17
AGAP3-202ENST00000397238 CYP26C1Q6V0L0 522 aa22.38■■□□□ 1.17
AGAP3-202ENST00000397238 USP54Q70EL1 1684 aa22.38■■□□□ 1.17
AGAP3-202ENST00000397238 AFAP1L1Q8TED9 768 aa22.38■■□□□ 1.17
AGAP3-202ENST00000397238 DRC1Q96MC2 740 aa22.38■■□□□ 1.17
AGAP3-202ENST00000397238 SLAIN2Q9P270 581 aa22.38■■□□□ 1.17
AGAP3-202ENST00000397238 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.38■■□□□ 1.17
AGAP3-202ENST00000397238 TCIRG1Q13488 830 aa22.37■■□□□ 1.17
AGAP3-202ENST00000397238 CTR9Q6PD62 1173 aa22.37■■□□□ 1.17
AGAP3-202ENST00000397238 SMARCC1Q92922 1105 aaPredicted RBP22.37■■□□□ 1.17
AGAP3-202ENST00000397238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.37■■□□□ 1.17
AGAP3-202ENST00000397238 TNS3Q68CZ2 1445 aa22.37■■□□□ 1.17
AGAP3-202ENST00000397238 PBX1P40424 430 aa22.37■■□□□ 1.17
AGAP3-202ENST00000397238 LIFRP42702 1097 aa22.37■■□□□ 1.17
AGAP3-202ENST00000397238 TTC19Q6DKK2 380 aaPredicted RBP22.37■■□□□ 1.17
AGAP3-202ENST00000397238 TICAM2Q86XR7 235 aa22.37■■□□□ 1.17
AGAP3-202ENST00000397238 ATP1A1P05023 1023 aaKnown RBP22.36■■□□□ 1.17
AGAP3-202ENST00000397238 CDKAL1Q5VV42 579 aa22.36■■□□□ 1.17
AGAP3-202ENST00000397238 AEBP2Q6ZN18 517 aaPredicted RBP22.36■■□□□ 1.17
AGAP3-202ENST00000397238 FANCBQ8NB91 859 aa22.36■■□□□ 1.17
AGAP3-202ENST00000397238 IQSEC3Q9UPP2 1182 aaPredicted RBP22.36■■□□□ 1.17
AGAP3-202ENST00000397238 EPN1Q9Y6I3 576 aaPredicted RBP22.36■■□□□ 1.17
AGAP3-202ENST00000397238 SLC4A4Q9Y6R1 1079 aa22.36■■□□□ 1.17
AGAP3-202ENST00000397238 PLEKHG2Q9H7P9 1386 aa22.36■■□□□ 1.17
AGAP3-202ENST00000397238 TTF1Q15361 905 aaPredicted RBP22.36■■□□□ 1.17
AGAP3-202ENST00000397238 CCDC122Q5T0U0 273 aa22.36■■□□□ 1.17
AGAP3-202ENST00000397238 IQUBQ8NA54 791 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms