RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 LONRF2Q1L5Z9 754 aa13.61□□□□□ -0.23
SMU1-201ENST00000397149 NSMFQ6X4W1 530 aa13.61□□□□□ -0.23
SMU1-201ENST00000397149 IQUBQ8NA54 791 aa13.61□□□□□ -0.23
SMU1-201ENST00000397149 TRIM4Q9C037 500 aa13.61□□□□□ -0.23
SMU1-201ENST00000397149 IFT122Q9HBG6 1241 aa13.61□□□□□ -0.23
SMU1-201ENST00000397149 GPC4O75487 556 aa13.61□□□□□ -0.23
SMU1-201ENST00000397149 ABCB4P21439 1286 aa13.61□□□□□ -0.23
SMU1-201ENST00000397149 NLRP7Q8WX94 980 aa13.61□□□□□ -0.23
SMU1-201ENST00000397149 APOL6Q9BWW8 343 aa13.61□□□□□ -0.23
SMU1-201ENST00000397149 Q9H521 79 aa13.61□□□□□ -0.23
SMU1-201ENST00000397149 IRX4P78413 519 aa13.61□□□□□ -0.23
SMU1-201ENST00000397149 PIP4K2CQ8TBX8 421 aa13.61□□□□□ -0.23
SMU1-201ENST00000397149 NEUROG2Q9H2A3 272 aa13.61□□□□□ -0.23
SMU1-201ENST00000397149 DAAM1Q9Y4D1 1078 aa13.61□□□□□ -0.23
SMU1-201ENST00000397149 RNF40O75150 1001 aa13.6□□□□□ -0.23
SMU1-201ENST00000397149 RPSAP08865 295 aaKnown RBP13.6□□□□□ -0.23
SMU1-201ENST00000397149 PMS1P54277 932 aaKnown RBP13.6□□□□□ -0.23
SMU1-201ENST00000397149 VWA3BQ502W6 1294 aa13.6□□□□□ -0.23
SMU1-201ENST00000397149 POTEDQ86YR6 584 aa13.6□□□□□ -0.23
SMU1-201ENST00000397149 PIK3AP1Q6ZUJ8 805 aa13.6□□□□□ -0.23
SMU1-201ENST00000397149 HINFPQ9BQA5 517 aa13.6□□□□□ -0.23
SMU1-201ENST00000397149 MRPL44Q9H9J2 332 aaKnown RBP13.6□□□□□ -0.23
SMU1-201ENST00000397149 G3BP2Q9UN86 482 aaKnown RBP13.6□□□□□ -0.23
SMU1-201ENST00000397149 CWF19L2Q2TBE0 894 aaKnown RBP13.6□□□□□ -0.23
SMU1-201ENST00000397149 NME9Q86XW9 330 aa13.6□□□□□ -0.23
SMU1-201ENST00000397149 SMCR8Q8TEV9 937 aaPredicted RBP13.6□□□□□ -0.23
SMU1-201ENST00000397149 NR1I2O75469 434 aa13.6□□□□□ -0.23
SMU1-201ENST00000397149 LONP1P36776 959 aaKnown RBP13.6□□□□□ -0.23
SMU1-201ENST00000397149 MAP3K7CLP57077 242 aa13.6□□□□□ -0.23
SMU1-201ENST00000397149 HABP4Q5JVS0 413 aaKnown RBP13.6□□□□□ -0.23
SMU1-201ENST00000397149 PEX26Q7Z412 305 aa13.6□□□□□ -0.23
SMU1-201ENST00000397149 CARD6Q9BX69 1037 aa13.6□□□□□ -0.23
SMU1-201ENST00000397149 ZRANB1Q9UGI0 708 aa13.6□□□□□ -0.23
SMU1-201ENST00000397149 RGS16O15492 202 aaPredicted RBP13.59□□□□□ -0.23
SMU1-201ENST00000397149 EEF1DP29692 281 aaKnown RBP13.59□□□□□ -0.23
SMU1-201ENST00000397149 ANKRD13DQ6ZTN6 518 aa13.59□□□□□ -0.23
SMU1-201ENST00000397149 GLG1Q92896 1179 aa13.59□□□□□ -0.23
SMU1-201ENST00000397149 KRT10P13645 584 aa13.59□□□□□ -0.23
SMU1-201ENST00000397149 TCP10Q12799 353 aa13.59□□□□□ -0.23
SMU1-201ENST00000397149 RUFY4Q6ZNE9 571 aa13.59□□□□□ -0.23
SMU1-201ENST00000397149 CSGALNACT2Q8N6G5 542 aa13.59□□□□□ -0.23
SMU1-201ENST00000397149 ARHGDIAP52565 204 aa13.59□□□□□ -0.23
SMU1-201ENST00000397149 SECISBP2LQ93073 1101 aaKnown RBP13.59□□□□□ -0.23
SMU1-201ENST00000397149 CLTAP09496 248 aa13.59□□□□□ -0.23
SMU1-201ENST00000397149 GDAP1Q8TB36 358 aa13.59□□□□□ -0.23
SMU1-201ENST00000397149 PYGLP06737 847 aa13.59□□□□□ -0.23
SMU1-201ENST00000397149 ADCY8P40145 1251 aa13.59□□□□□ -0.23
SMU1-201ENST00000397149 PFDN6O15212 129 aa13.59□□□□□ -0.23
SMU1-201ENST00000397149 ADCY1Q08828 1119 aa13.59□□□□□ -0.23
SMU1-201ENST00000397149 TTBK2Q6IQ55 1244 aa13.59□□□□□ -0.23
SMU1-201ENST00000397149 HACE1Q8IYU2 909 aa13.59□□□□□ -0.23
SMU1-201ENST00000397149 ATP6V0A1Q93050 837 aa13.59□□□□□ -0.23
SMU1-201ENST00000397149 POLR3CQ9BUI4 534 aaPredicted RBP13.59□□□□□ -0.23
SMU1-201ENST00000397149 FAN1Q9Y2M0 1017 aa13.59□□□□□ -0.23
SMU1-201ENST00000397149 SLC39A6Q13433 755 aa13.58□□□□□ -0.23
SMU1-201ENST00000397149 PPP2R5EQ16537 467 aa13.58□□□□□ -0.23
SMU1-201ENST00000397149 RBM46Q8TBY0 533 aaKnown RBP13.58□□□□□ -0.23
SMU1-201ENST00000397149 ATP1A2P50993 1020 aa13.58□□□□□ -0.24
SMU1-201ENST00000397149 TEX13AQ9BXU3 409 aaPredicted RBP13.58□□□□□ -0.24
SMU1-201ENST00000397149 CAPN7Q9Y6W3 813 aa13.58□□□□□ -0.24
SMU1-201ENST00000397149 HIF1AQ16665 826 aa13.58□□□□□ -0.24
SMU1-201ENST00000397149 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.58□□□□□ -0.24
SMU1-201ENST00000397149 ARPP19P56211 112 aa13.58□□□□□ -0.24
SMU1-201ENST00000397149 ASPHQ12797 758 aa13.58□□□□□ -0.24
SMU1-201ENST00000397149 ELP1O95163 1332 aa13.58□□□□□ -0.24
SMU1-201ENST00000397149 H3BRJ5 948 aa13.58□□□□□ -0.24
SMU1-201ENST00000397149 HERC4Q5GLZ8 1057 aaPredicted RBP13.58□□□□□ -0.24
SMU1-201ENST00000397149 TRIM59Q8IWR1 403 aa13.58□□□□□ -0.24
SMU1-201ENST00000397149 KLHDC4Q8TBB5 520 aa13.58□□□□□ -0.24
SMU1-201ENST00000397149 TRPC6Q9Y210 931 aa13.58□□□□□ -0.24
SMU1-201ENST00000397149 STAM2O75886 525 aa13.57□□□□□ -0.24
SMU1-201ENST00000397149 TTC19Q6DKK2 380 aaPredicted RBP13.57□□□□□ -0.24
SMU1-201ENST00000397149 CYP26C1Q6V0L0 522 aa13.57□□□□□ -0.24
SMU1-201ENST00000397149 ZNF654Q8IZM8 581 aa13.57□□□□□ -0.24
SMU1-201ENST00000397149 PAG1Q9NWQ8 432 aa13.57□□□□□ -0.24
SMU1-201ENST00000397149 KIF11P52732 1056 aa13.57□□□□□ -0.24
SMU1-201ENST00000397149 NMIQ13287 307 aaPredicted RBP13.57□□□□□ -0.24
SMU1-201ENST00000397149 CNNM4Q6P4Q7 775 aa13.57□□□□□ -0.24
SMU1-201ENST00000397149 PA2G4Q9UQ80 394 aaKnown RBP13.57□□□□□ -0.24
SMU1-201ENST00000397149 EMILIN1Q9Y6C2 1016 aa13.57□□□□□ -0.24
SMU1-201ENST00000397149 CFBP00751 764 aa13.57□□□□□ -0.24
SMU1-201ENST00000397149 EEF1GP26641 437 aaKnown RBP13.57□□□□□ -0.24
SMU1-201ENST00000397149 PRIM1P49642 420 aaKnown RBP13.57□□□□□ -0.24
SMU1-201ENST00000397149 IGBP1P78318 339 aa13.57□□□□□ -0.24
SMU1-201ENST00000397149 SKOR1P84550 965 aa13.57□□□□□ -0.24
SMU1-201ENST00000397149 SNX1Q13596 522 aa13.57□□□□□ -0.24
SMU1-201ENST00000397149 LMBR1LQ6UX01 489 aa13.57□□□□□ -0.24
SMU1-201ENST00000397149 TEX11Q8IYF3 940 aa13.57□□□□□ -0.24
SMU1-201ENST00000397149 EIF2AQ9BY44 585 aaKnown RBP13.57□□□□□ -0.24
SMU1-201ENST00000397149 ARHGEF10LQ9HCE6 1279 aa13.57□□□□□ -0.24
SMU1-201ENST00000397149 ZNF277Q9NRM2 450 aaPredicted RBP13.57□□□□□ -0.24
SMU1-201ENST00000397149 FAM83GA6ND36 823 aa13.57□□□□□ -0.24
SMU1-201ENST00000397149 SART1O43290 800 aaKnown RBP13.57□□□□□ -0.24
SMU1-201ENST00000397149 F13A1P00488 732 aa13.57□□□□□ -0.24
SMU1-201ENST00000397149 Q3C1V9 767 aa13.57□□□□□ -0.24
SMU1-201ENST00000397149 IFNL2Q8IZJ0 200 aa13.57□□□□□ -0.24
SMU1-201ENST00000397149 KLHL14Q9P2G3 628 aa13.57□□□□□ -0.24
SMU1-201ENST00000397149 MAP2K2P36507 400 aa13.57□□□□□ -0.24
SMU1-201ENST00000397149 NSD3Q9BZ95 1437 aa13.57□□□□□ -0.24
SMU1-201ENST00000397149 RAB20Q9NX57 234 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms