RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 CEP85Q6P2H3 762 aa19.36■□□□□ 0.69
MCF2L-208ENST00000397030 PPEF1O14829 653 aaPredicted RBP19.36■□□□□ 0.69
MCF2L-208ENST00000397030 PPP4R4Q6NUP7 873 aa19.36■□□□□ 0.69
MCF2L-208ENST00000397030 ARMC9Q7Z3E5 817 aa19.36■□□□□ 0.69
MCF2L-208ENST00000397030 TBC1D8BQ0IIM8 1120 aa19.36■□□□□ 0.69
MCF2L-208ENST00000397030 PRR16Q569H4 304 aa19.36■□□□□ 0.69
MCF2L-208ENST00000397030 KIAA1841Q6NSI8 718 aa19.36■□□□□ 0.69
MCF2L-208ENST00000397030 AFAP1L2Q8N4X5 818 aa19.36■□□□□ 0.69
MCF2L-208ENST00000397030 FLAD1Q8NFF5 587 aa19.36■□□□□ 0.69
MCF2L-208ENST00000397030 CETN3O15182 167 aa19.36■□□□□ 0.69
MCF2L-208ENST00000397030 ATF7P17544 494 aaPredicted RBP19.36■□□□□ 0.69
MCF2L-208ENST00000397030 BRAPQ7Z569 592 aa19.36■□□□□ 0.69
MCF2L-208ENST00000397030 UBL4BQ8N7F7 174 aa19.36■□□□□ 0.69
MCF2L-208ENST00000397030 ZNF772Q68DY9 489 aaPredicted RBP19.36■□□□□ 0.69
MCF2L-208ENST00000397030 DDX21Q9NR30 783 aaKnown RBP eCLIP19.36■□□□□ 0.69
MCF2L-208ENST00000397030 FAM184BQ9ULE4 1060 aa19.36■□□□□ 0.69
MCF2L-208ENST00000397030 TNNC2P02585 160 aa19.35■□□□□ 0.69
MCF2L-208ENST00000397030 RSPH14Q9UHP6 348 aa19.35■□□□□ 0.69
MCF2L-208ENST00000397030 KCTD2Q14681 263 aa19.35■□□□□ 0.69
MCF2L-208ENST00000397030 CPLX4Q7Z7G2 160 aa19.35■□□□□ 0.69
MCF2L-208ENST00000397030 ZAP70P43403 619 aa19.35■□□□□ 0.69
MCF2L-208ENST00000397030 BZW2Q9Y6E2 419 aaKnown RBP19.35■□□□□ 0.69
MCF2L-208ENST00000397030 TBC1D10BQ4KMP7 808 aaPredicted RBP19.35■□□□□ 0.69
MCF2L-208ENST00000397030 CMTR1Q8N1G2 835 aaKnown RBP19.35■□□□□ 0.69
MCF2L-208ENST00000397030 MROH5Q6ZUA9 1318 aa19.35■□□□□ 0.69
MCF2L-208ENST00000397030 CSGALNACT2Q8N6G5 542 aa19.35■□□□□ 0.69
MCF2L-208ENST00000397030 TBC1D22AQ8WUA7 517 aa19.35■□□□□ 0.69
MCF2L-208ENST00000397030 POLIQ9UNA4 740 aa19.35■□□□□ 0.69
MCF2L-208ENST00000397030 GYG1P46976 350 aa19.35■□□□□ 0.69
MCF2L-208ENST00000397030 POLA2Q14181 598 aa19.35■□□□□ 0.69
MCF2L-208ENST00000397030 G2E3Q7L622 706 aa19.35■□□□□ 0.69
MCF2L-208ENST00000397030 SRGAP1Q7Z6B7 1085 aa19.35■□□□□ 0.69
MCF2L-208ENST00000397030 KCNJ14Q9UNX9 436 aa19.35■□□□□ 0.69
MCF2L-208ENST00000397030 WDR46O15213 610 aaKnown RBP19.34■□□□□ 0.69
MCF2L-208ENST00000397030 SAT1P21673 171 aa19.34■□□□□ 0.69
MCF2L-208ENST00000397030 UBXN2AP68543 259 aa19.34■□□□□ 0.69
MCF2L-208ENST00000397030 MAP3K19Q56UN5 1328 aa19.34■□□□□ 0.69
MCF2L-208ENST00000397030 CIB2O75838 187 aa19.34■□□□□ 0.69
MCF2L-208ENST00000397030 POLR2MP0CAP2 368 aa19.34■□□□□ 0.69
MCF2L-208ENST00000397030 ARID4AP29374 1257 aaPredicted RBP19.34■□□□□ 0.69
MCF2L-208ENST00000397030 POLGP54098 1239 aaPredicted RBP19.34■□□□□ 0.69
MCF2L-208ENST00000397030 SPICE1Q8N0Z3 855 aa19.34■□□□□ 0.69
MCF2L-208ENST00000397030 GLT8D2Q9H1C3 349 aa19.34■□□□□ 0.69
MCF2L-208ENST00000397030 BLZF1Q9H2G9 400 aa19.34■□□□□ 0.69
MCF2L-208ENST00000397030 CCPG1Q9ULG6 757 aa19.34■□□□□ 0.69
MCF2L-208ENST00000397030 TNNQ9UQP3 1299 aa19.34■□□□□ 0.69
MCF2L-208ENST00000397030 CABP7Q86V35 215 aa19.34■□□□□ 0.69
MCF2L-208ENST00000397030 CCDC26Q8TAB7 109 aa19.34■□□□□ 0.69
MCF2L-208ENST00000397030 NKIRAS1Q9NYS0 192 aa19.34■□□□□ 0.69
MCF2L-208ENST00000397030 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.34■□□□□ 0.69
MCF2L-208ENST00000397030 POLR2DO15514 142 aaKnown RBP19.34■□□□□ 0.69
MCF2L-208ENST00000397030 TAB3Q8N5C8 712 aaPredicted RBP19.34■□□□□ 0.69
MCF2L-208ENST00000397030 KDRP35968 1356 aa19.34■□□□□ 0.69
MCF2L-208ENST00000397030 NAA25Q14CX7 972 aa19.34■□□□□ 0.69
MCF2L-208ENST00000397030 TRPC5Q9UL62 973 aaPredicted RBP19.34■□□□□ 0.69
MCF2L-208ENST00000397030 KCNQ4P56696 695 aa19.33■□□□□ 0.69
MCF2L-208ENST00000397030 SETDB1Q15047 1291 aa19.33■□□□□ 0.69
MCF2L-208ENST00000397030 USPL1Q5W0Q7 1092 aa19.33■□□□□ 0.69
MCF2L-208ENST00000397030 NME8Q8N427 588 aa19.33■□□□□ 0.69
MCF2L-208ENST00000397030 ASIC3Q9UHC3 531 aa19.33■□□□□ 0.69
MCF2L-208ENST00000397030 FMNL1O95466 1100 aaPredicted RBP19.33■□□□□ 0.69
MCF2L-208ENST00000397030 STK24Q9Y6E0 443 aa19.33■□□□□ 0.69
MCF2L-208ENST00000397030 VIMP08670 466 aaKnown RBP19.33■□□□□ 0.68
MCF2L-208ENST00000397030 GOLGA8HP0CJ92 632 aa19.33■□□□□ 0.68
MCF2L-208ENST00000397030 RAD50Q92878 1312 aa19.33■□□□□ 0.68
MCF2L-208ENST00000397030 LRRIQ4A6NIV6 560 aa19.33■□□□□ 0.68
MCF2L-208ENST00000397030 PHACTR3Q96KR7 559 aa19.33■□□□□ 0.68
MCF2L-208ENST00000397030 FTOQ9C0B1 505 aaKnown RBP eCLIP19.33■□□□□ 0.68
MCF2L-208ENST00000397030 SF3A3Q12874 501 aaKnown RBP eCLIP19.33■□□□□ 0.689e-7■■■■■ 32.4
MCF2L-208ENST00000397030 NUB1Q9Y5A7 615 aa19.33■□□□□ 0.68
MCF2L-208ENST00000397030 ELP1O95163 1332 aa19.32■□□□□ 0.68
MCF2L-208ENST00000397030 BTDP43251 543 aa19.32■□□□□ 0.68
MCF2L-208ENST00000397030 VWA3BQ502W6 1294 aa19.32■□□□□ 0.68
MCF2L-208ENST00000397030 CEP85LQ5SZL2 805 aa19.32■□□□□ 0.68
MCF2L-208ENST00000397030 CCDC121Q6ZUS5 278 aa19.32■□□□□ 0.68
MCF2L-208ENST00000397030 EEPD1Q7L9B9 569 aa19.32■□□□□ 0.68
MCF2L-208ENST00000397030 KRT25Q7Z3Z0 450 aa19.32■□□□□ 0.68
MCF2L-208ENST00000397030 K7ENM7 598 aa19.32■□□□□ 0.68
MCF2L-208ENST00000397030 STAM2O75886 525 aa19.32■□□□□ 0.68
MCF2L-208ENST00000397030 RPS8P62241 208 aaKnown RBP19.32■□□□□ 0.68
MCF2L-208ENST00000397030 DBNDD1Q9H9R9 158 aa19.32■□□□□ 0.68
MCF2L-208ENST00000397030 ZHX1Q9UKY1 873 aaPredicted RBP19.32■□□□□ 0.68
MCF2L-208ENST00000397030 ZNF608Q9ULD9 1512 aaPredicted RBP19.32■□□□□ 0.68
MCF2L-208ENST00000397030 UBN2Q6ZU65 1347 aa19.32■□□□□ 0.68
MCF2L-208ENST00000397030 SMCO2A6NFE2 343 aa19.32■□□□□ 0.68
MCF2L-208ENST00000397030 DTNBO60941 627 aa19.32■□□□□ 0.68
MCF2L-208ENST00000397030 TMOD1P28289 359 aa19.32■□□□□ 0.68
MCF2L-208ENST00000397030 HPDP32754 393 aaPredicted RBP19.32■□□□□ 0.68
MCF2L-208ENST00000397030 RILPL1Q5EBL4 403 aa19.32■□□□□ 0.68
MCF2L-208ENST00000397030 ARHGAP45Q92619 1136 aa19.32■□□□□ 0.68
MCF2L-208ENST00000397030 UTP11Q9Y3A2 253 aaKnown RBP19.32■□□□□ 0.68
MCF2L-208ENST00000397030 TYRO3Q06418 890 aa19.32■□□□□ 0.68
MCF2L-208ENST00000397030 PCDHB13Q9Y5F0 798 aa19.32■□□□□ 0.68
MCF2L-208ENST00000397030 CUL7Q14999 1698 aa19.32■□□□□ 0.68
MCF2L-208ENST00000397030 PLEKHA4Q9H4M7 779 aa19.31■□□□□ 0.68
MCF2L-208ENST00000397030 SEPT9Q9UHD8 586 aaPredicted RBP19.31■□□□□ 0.68
MCF2L-208ENST00000397030 PLEKHG3A1L390 1219 aa19.31■□□□□ 0.68
MCF2L-208ENST00000397030 GCKRQ14397 625 aa19.31■□□□□ 0.68
MCF2L-208ENST00000397030 CNKSR1Q969H4 720 aa19.31■□□□□ 0.68
MCF2L-208ENST00000397030 TMEM87BQ96K49 555 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms