RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 PDIA3P30101 505 aaKnown RBP8.14□□□□□ -1.11
RTN4-205ENST00000394609 PPARAQ07869 468 aa8.14□□□□□ -1.11
RTN4-205ENST00000394609 SCRN1Q12765 414 aa8.14□□□□□ -1.11
RTN4-205ENST00000394609 CCDC125Q86Z20 511 aa8.14□□□□□ -1.11
RTN4-205ENST00000394609 SH3RF3Q8TEJ3 882 aaPredicted RBP8.14□□□□□ -1.11
RTN4-205ENST00000394609 C7orf43Q8WVR3 580 aa8.14□□□□□ -1.11
RTN4-205ENST00000394609 ANP32BQ92688 251 aaKnown RBP8.14□□□□□ -1.11
RTN4-205ENST00000394609 GTF3C6Q969F1 213 aa8.14□□□□□ -1.11
RTN4-205ENST00000394609 CNKSR1Q969H4 720 aa8.14□□□□□ -1.11
RTN4-205ENST00000394609 CRNKL1Q9BZJ0 848 aaKnown RBP8.14□□□□□ -1.11
RTN4-205ENST00000394609 DBNDD1Q9H9R9 158 aa8.14□□□□□ -1.11
RTN4-205ENST00000394609 KLF18A0A0U1RQI7 1052 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 TNFRSF10AO00220 468 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 PRDM1O75626 825 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 CYP2D6P10635 497 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 GSTO1P78417 241 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 MCTP1Q6DN14 999 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 CTR9Q6PD62 1173 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 SLC16A10Q8TF71 515 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 ZNF775Q96BV0 537 aaPredicted RBP8.13□□□□□ -1.11
RTN4-205ENST00000394609 DDX11Q96FC9 970 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 ZKSCAN3Q9BRR0 538 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 SENP2Q9HC62 589 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 DCP1AQ9NPI6 582 aaPredicted RBP8.13□□□□□ -1.11
RTN4-205ENST00000394609 MYH7P12883 1935 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 DOCK2Q92608 1830 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 FAM205AQ6ZU69 1335 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 WDR33Q9C0J8 1336 aaKnown RBP8.13□□□□□ -1.11
RTN4-205ENST00000394609 GOLGA6L22H0YM25 854 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 STX6O43752 255 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 PFKFB2O60825 505 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 BAG3O95817 575 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 DPEP1P16444 411 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 USP5P45974 858 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 R3HDM1Q15032 1099 aaKnown RBP8.13□□□□□ -1.11
RTN4-205ENST00000394609 GRIPAP1Q4V328 841 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 PLA2G2CQ5R387 149 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 FBXL16Q8N461 479 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 CERS5Q8N5B7 392 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 TBC1D22AQ8WUA7 517 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 TGFBRAP1Q8WUH2 860 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 STAG1Q8WVM7 1258 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 EYA3Q99504 573 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 MCM9Q9NXL9 1143 aa8.13□□□□□ -1.11
RTN4-205ENST00000394609 CACNA1SQ13698 1873 aa8.12□□□□□ -1.11
RTN4-205ENST00000394609 MROH7-TTC4A0A0A0MT08 1334 aa8.12□□□□□ -1.11
RTN4-205ENST00000394609 VPS37CA5D8V6 355 aaPredicted RBP8.12□□□□□ -1.11
RTN4-205ENST00000394609 GOLGA8BA8MQT2 603 aa8.12□□□□□ -1.11
RTN4-205ENST00000394609 SH2B2O14492 632 aaPredicted RBP8.12□□□□□ -1.11
RTN4-205ENST00000394609 IFIT3O14879 490 aaKnown RBP8.12□□□□□ -1.11
RTN4-205ENST00000394609 ZNF500O60304 480 aaPredicted RBP8.12□□□□□ -1.11
RTN4-205ENST00000394609 CTDNEP1O95476 244 aa8.12□□□□□ -1.11
RTN4-205ENST00000394609 LDHCP07864 332 aa8.12□□□□□ -1.11
RTN4-205ENST00000394609 USP17L8P0C7I0 530 aa8.12□□□□□ -1.11
RTN4-205ENST00000394609 RXRAP19793 462 aa8.12□□□□□ -1.11
RTN4-205ENST00000394609 BTDP43251 543 aa8.12□□□□□ -1.11
RTN4-205ENST00000394609 GCGRP47871 477 aa8.12□□□□□ -1.11
RTN4-205ENST00000394609 SCNN1DP51172 638 aa8.12□□□□□ -1.11
RTN4-205ENST00000394609 AOC3Q16853 763 aa8.12□□□□□ -1.11
RTN4-205ENST00000394609 TMEM67Q5HYA8 995 aa8.12□□□□□ -1.11
RTN4-205ENST00000394609 LARP1BQ659C4 914 aaKnown RBP8.12□□□□□ -1.11
RTN4-205ENST00000394609 TTLL6Q8N841 843 aa8.12□□□□□ -1.11
RTN4-205ENST00000394609 IGDCC4Q8TDY8 1250 aa8.12□□□□□ -1.11
RTN4-205ENST00000394609 ZNF274Q96GC6 653 aaPredicted RBP8.12□□□□□ -1.11
RTN4-205ENST00000394609 NOL10Q9BSC4 688 aaKnown RBP8.12□□□□□ -1.11
RTN4-205ENST00000394609 RTFDC1Q9BY42 306 aaPredicted RBP8.12□□□□□ -1.11
RTN4-205ENST00000394609 KRT23Q9C075 422 aa8.12□□□□□ -1.11
RTN4-205ENST00000394609 CNNM2Q9H8M5 875 aa8.12□□□□□ -1.11
RTN4-205ENST00000394609 ATP8A2Q9NTI2 1148 aa8.12□□□□□ -1.11
RTN4-205ENST00000394609 PPP1R1BQ9UD71 204 aaPredicted RBP8.12□□□□□ -1.11
RTN4-205ENST00000394609 ANAPC4Q9UJX5 808 aa8.12□□□□□ -1.11
RTN4-205ENST00000394609 ANGEL1Q9UNK9 670 aaKnown RBP8.12□□□□□ -1.11
RTN4-205ENST00000394609 DUOX1Q9NRD9 1551 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 ZSCAN22P10073 491 aaPredicted RBP8.11□□□□□ -1.11
RTN4-205ENST00000394609 KCNA3P22001 575 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 EVCP57679 992 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 CSPP1Q1MSJ5 1256 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 KLHL40Q2TBA0 621 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 GIMAP6Q6P9H5 292 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 NFXL1Q6ZNB6 911 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 MAPKAPK5Q8IW41 473 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 CCDC144CPQ8IYA2 1237 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 NSUN7Q8NE18 718 aaKnown RBP8.11□□□□□ -1.11
RTN4-205ENST00000394609 MYL10Q9BUA6 226 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 RNF41Q9H4P4 317 aaPredicted RBP8.11□□□□□ -1.11
RTN4-205ENST00000394609 SAP30BPQ9UHR5 308 aaKnown RBP8.11□□□□□ -1.11
RTN4-205ENST00000394609 TTF2Q9UNY4 1162 aaKnown RBP8.11□□□□□ -1.11
RTN4-205ENST00000394609 MTMR6Q9Y217 621 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 COL11A2P13942 1736 aaPredicted RBP8.11□□□□□ -1.11
RTN4-205ENST00000394609 WDR19Q8NEZ3 1342 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 GPR75-ASB3A0A0A6YYF3 556 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 PTPDC1A2A3K4 754 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 GPR37O15354 613 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 ECE2O60344 883 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 RANBP6O60518 1105 aaKnown RBP8.11□□□□□ -1.11
RTN4-205ENST00000394609 ZNF445P59923 1031 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 FUT2Q10981 343 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 TMED8Q6PL24 325 aaPredicted RBP8.11□□□□□ -1.11
RTN4-205ENST00000394609 PODNQ7Z5L7 613 aa8.11□□□□□ -1.11
RTN4-205ENST00000394609 FERMT3Q86UX7 667 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms