RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 CALML3P27482 149 aa11.93□□□□□ -0.5
CALD1-203ENST00000393118 GSTO1P78417 241 aa11.93□□□□□ -0.5
CALD1-203ENST00000393118 LETM2Q2VYF4 491 aa11.93□□□□□ -0.5
CALD1-203ENST00000393118 TEX11Q8IYF3 940 aa11.93□□□□□ -0.5
CALD1-203ENST00000393118 MLKLQ8NB16 471 aa11.93□□□□□ -0.5
CALD1-203ENST00000393118 SLC4A9Q96Q91 983 aa11.93□□□□□ -0.5
CALD1-203ENST00000393118 IMPACTQ9P2X3 320 aa11.93□□□□□ -0.5
CALD1-203ENST00000393118 CASP1P29466 404 aa11.92□□□□□ -0.5
CALD1-203ENST00000393118 ITPK1Q13572 414 aa11.92□□□□□ -0.5
CALD1-203ENST00000393118 TICAM2Q86XR7 235 aa11.92□□□□□ -0.5
CALD1-203ENST00000393118 DHX40Q8IX18 779 aaKnown RBP11.92□□□□□ -0.5
CALD1-203ENST00000393118 RASGRP4Q8TDF6 673 aa11.92□□□□□ -0.5
CALD1-203ENST00000393118 IGDCC4Q8TDY8 1250 aa11.92□□□□□ -0.5
CALD1-203ENST00000393118 USP27XA6NNY8 438 aa11.92□□□□□ -0.5
CALD1-203ENST00000393118 CYP2D6P10635 497 aa11.92□□□□□ -0.5
CALD1-203ENST00000393118 SHC4Q6S5L8 630 aa11.92□□□□□ -0.5
CALD1-203ENST00000393118 DTHD1Q6ZMT9 781 aa11.92□□□□□ -0.5
CALD1-203ENST00000393118 EEF2KMTQ96G04 330 aa11.92□□□□□ -0.5
CALD1-203ENST00000393118 EPS15P42566 896 aa11.92□□□□□ -0.5
CALD1-203ENST00000393118 PTGDRQ13258 359 aa11.92□□□□□ -0.5
CALD1-203ENST00000393118 KIAA1328Q86T90 577 aa11.92□□□□□ -0.5
CALD1-203ENST00000393118 EPSTI1Q96J88 318 aa11.92□□□□□ -0.5
CALD1-203ENST00000393118 UIMC1Q96RL1 719 aa11.92□□□□□ -0.5
CALD1-203ENST00000393118 MINPP1Q9UNW1 487 aa11.92□□□□□ -0.5
CALD1-203ENST00000393118 ZNF804BA4D1E1 1349 aa11.92□□□□□ -0.5
CALD1-203ENST00000393118 COL5A2P05997 1499 aaPredicted RBP11.92□□□□□ -0.5
CALD1-203ENST00000393118 USP17L8P0C7I0 530 aa11.91□□□□□ -0.5
CALD1-203ENST00000393118 MTIF2P46199 727 aaKnown RBP11.91□□□□□ -0.5
CALD1-203ENST00000393118 GNAQP50148 359 aa11.91□□□□□ -0.5
CALD1-203ENST00000393118 DIXDC1Q155Q3 683 aa11.91□□□□□ -0.5
CALD1-203ENST00000393118 IGSF22Q8N9C0 903 aa11.91□□□□□ -0.5
CALD1-203ENST00000393118 MARCH10Q8NA82 808 aaPredicted RBP11.91□□□□□ -0.5
CALD1-203ENST00000393118 BANK1Q8NDB2 785 aa11.91□□□□□ -0.5
CALD1-203ENST00000393118 SYMPKQ92797 1274 aaKnown RBP11.91□□□□□ -0.5
CALD1-203ENST00000393118 DESI2Q9BSY9 194 aa11.91□□□□□ -0.5
CALD1-203ENST00000393118 RDXP35241 583 aaKnown RBP11.91□□□□□ -0.5
CALD1-203ENST00000393118 MNAT1P51948 309 aa11.91□□□□□ -0.5
CALD1-203ENST00000393118 ST5P78524 1137 aa11.91□□□□□ -0.5
CALD1-203ENST00000393118 MECOMQ03112 1051 aa11.91□□□□□ -0.5
CALD1-203ENST00000393118 TERF2Q15554 542 aa11.91□□□□□ -0.5
CALD1-203ENST00000393118 RNF216Q9NWF9 866 aaPredicted RBP11.91□□□□□ -0.5
CALD1-203ENST00000393118 TTC31Q49AM3 519 aaPredicted RBP11.91□□□□□ -0.5
CALD1-203ENST00000393118 CCDC148Q8NFR7 591 aa11.91□□□□□ -0.5
CALD1-203ENST00000393118 STAG1Q8WVM7 1258 aa11.91□□□□□ -0.5
CALD1-203ENST00000393118 FOXP1Q9H334 677 aaPredicted RBP11.91□□□□□ -0.5
CALD1-203ENST00000393118 SYNRGQ9UMZ2 1314 aa11.91□□□□□ -0.5
CALD1-203ENST00000393118 RGPD2P0DJD1 1756 aa11.91□□□□□ -0.5
CALD1-203ENST00000393118 ASIC1P78348 528 aa11.91□□□□□ -0.5
CALD1-203ENST00000393118 ENOX2Q16206 610 aaKnown RBP11.91□□□□□ -0.5
CALD1-203ENST00000393118 TBC1D9BQ66K14 1250 aa11.91□□□□□ -0.5
CALD1-203ENST00000393118 PNMA1Q8ND90 353 aa11.91□□□□□ -0.5
CALD1-203ENST00000393118 ENGASEQ8NFI3 743 aa11.91□□□□□ -0.5
CALD1-203ENST00000393118 CCDC102AQ96A19 550 aa11.91□□□□□ -0.5
CALD1-203ENST00000393118 DYNLL2Q96FJ2 89 aa11.91□□□□□ -0.5
CALD1-203ENST00000393118 CAMTA2O94983 1202 aa11.9□□□□□ -0.5
CALD1-203ENST00000393118 HNRNPH2P55795 449 aaKnown RBP11.9□□□□□ -0.5
CALD1-203ENST00000393118 ENAHQ8N8S7 591 aaPredicted RBP11.9□□□□□ -0.5
CALD1-203ENST00000393118 RNF26Q9BY78 433 aaPredicted RBP11.9□□□□□ -0.5
CALD1-203ENST00000393118 CDC25BP30305 580 aa11.9□□□□□ -0.5
CALD1-203ENST00000393118 AGXT2Q9BYV1 514 aa11.9□□□□□ -0.5
CALD1-203ENST00000393118 SPTLC3Q9NUV7 552 aa11.9□□□□□ -0.5
CALD1-203ENST00000393118 FAM205CA6NFA0 338 aa11.9□□□□□ -0.5
CALD1-203ENST00000393118 ERCC3P19447 782 aa11.9□□□□□ -0.5
CALD1-203ENST00000393118 PPP2R5BQ15173 497 aa11.9□□□□□ -0.5
CALD1-203ENST00000393118 SARM1Q6SZW1 724 aa11.9□□□□□ -0.5
CALD1-203ENST00000393118 ILDR1Q86SU0 546 aaPredicted RBP11.9□□□□□ -0.5
CALD1-203ENST00000393118 SGMS1Q86VZ5 419 aa11.9□□□□□ -0.5
CALD1-203ENST00000393118 WDR66Q8TBY9 1149 aa11.9□□□□□ -0.5
CALD1-203ENST00000393118 NOC3LQ8WTT2 800 aaKnown RBP11.9□□□□□ -0.5
CALD1-203ENST00000393118 CAMTA1Q9Y6Y1 1673 aa11.9□□□□□ -0.51
CALD1-203ENST00000393118 SLIT3O75094 1523 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 WTIPA6NIX2 430 aaPredicted RBP11.89□□□□□ -0.51
CALD1-203ENST00000393118 SCG2P13521 617 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 JAKMIP3Q5VZ66 844 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 GPIHBP1Q8IV16 184 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 CALML4Q96GE6 196 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 BSDC1Q9NW68 430 aaPredicted RBP11.89□□□□□ -0.51
CALD1-203ENST00000393118 MAN1B1Q9UKM7 699 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 AKR1B15C9JRZ8 316 aaPredicted RBP11.89□□□□□ -0.51
CALD1-203ENST00000393118 CCDC175P0C221 793 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 TRIM21P19474 475 aaKnown RBP11.89□□□□□ -0.51
CALD1-203ENST00000393118 BRD2P25440 801 aaKnown RBP11.89□□□□□ -0.51
CALD1-203ENST00000393118 UBXN1Q04323 297 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 ALX1Q15699 326 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 SLF2Q8IX21 1173 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 CTAGE1Q96RT6 745 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 SAMSN1Q9NSI8 373 aaKnown RBP11.89□□□□□ -0.51
CALD1-203ENST00000393118 TAB2Q9NYJ8 693 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 USP21Q9UK80 565 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 DCCP43146 1447 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 BAZ2BQ9UIF8 2168 aaKnown RBP11.89□□□□□ -0.51
CALD1-203ENST00000393118 MROH7-TTC4A0A0A0MT08 1334 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 TNNI2P48788 182 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 SPECC1LQ69YQ0 1117 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 ZNF622Q969S3 477 aaKnown RBP eCLIP11.89□□□□□ -0.51
CALD1-203ENST00000393118 CARD6Q9BX69 1037 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 EXOC1Q9NV70 894 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 RMND1Q9NWS8 449 aa11.89□□□□□ -0.51
CALD1-203ENST00000393118 ARPP21Q9UBL0 812 aaPredicted RBP11.89□□□□□ -0.51
CALD1-203ENST00000393118 ABCC12Q96J65 1359 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms