RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 APPBP2Q92624 585 aa13.02□□□□□ -0.33
PDCD4-202ENST00000393104 PIH1D3Q9NQM4 214 aaKnown RBP13.02□□□□□ -0.33
PDCD4-202ENST00000393104 VPS18Q9P253 973 aa13.02□□□□□ -0.33
PDCD4-202ENST00000393104 TFR2Q9UP52 801 aa13.02□□□□□ -0.33
PDCD4-202ENST00000393104 COBLO75128 1261 aa13.01□□□□□ -0.33
PDCD4-202ENST00000393104 NR5A1Q13285 461 aa13.01□□□□□ -0.33
PDCD4-202ENST00000393104 CCDC102BQ68D86 513 aa13.01□□□□□ -0.33
PDCD4-202ENST00000393104 SYNE4Q8N205 404 aa13.01□□□□□ -0.33
PDCD4-202ENST00000393104 CNNM3Q8NE01 707 aa13.01□□□□□ -0.33
PDCD4-202ENST00000393104 PLCD1P51178 756 aa13.01□□□□□ -0.33
PDCD4-202ENST00000393104 FKBP4Q02790 459 aaKnown RBP eCLIP13.01□□□□□ -0.33
PDCD4-202ENST00000393104 IMMTQ16891 758 aaKnown RBP13.01□□□□□ -0.33
PDCD4-202ENST00000393104 NOSTRINQ8IVI9 506 aa13.01□□□□□ -0.33
PDCD4-202ENST00000393104 SMYD4Q8IYR2 804 aaPredicted RBP13.01□□□□□ -0.33
PDCD4-202ENST00000393104 PLEKHA4Q9H4M7 779 aa13.01□□□□□ -0.33
PDCD4-202ENST00000393104 LRRC10BA6NIK2 292 aa13.01□□□□□ -0.33
PDCD4-202ENST00000393104 NUTM2BA6NNL0 878 aaPredicted RBP13.01□□□□□ -0.33
PDCD4-202ENST00000393104 NUTM2EB1AL46 878 aaPredicted RBP13.01□□□□□ -0.33
PDCD4-202ENST00000393104 MMP1P03956 469 aa13.01□□□□□ -0.33
PDCD4-202ENST00000393104 ADD2P35612 726 aa13.01□□□□□ -0.33
PDCD4-202ENST00000393104 TTC39AQ5SRH9 613 aa13.01□□□□□ -0.33
PDCD4-202ENST00000393104 WDR93Q6P2C0 686 aa13.01□□□□□ -0.33
PDCD4-202ENST00000393104 NUTM2AQ8IVF1 878 aaPredicted RBP13.01□□□□□ -0.33
PDCD4-202ENST00000393104 USP21Q9UK80 565 aa13.01□□□□□ -0.33
PDCD4-202ENST00000393104 GOLGA6L9A6NEM1 432 aa13□□□□□ -0.33
PDCD4-202ENST00000393104 RASSF10A6NK89 507 aa13□□□□□ -0.33
PDCD4-202ENST00000393104 CYP19A1P11511 503 aaPredicted RBP13□□□□□ -0.33
PDCD4-202ENST00000393104 CASP14P31944 242 aa13□□□□□ -0.33
PDCD4-202ENST00000393104 MCM6Q14566 821 aa13□□□□□ -0.33
PDCD4-202ENST00000393104 IRF2BP1Q8IU81 584 aa13□□□□□ -0.33
PDCD4-202ENST00000393104 KRI1Q8N9T8 703 aaKnown RBP13□□□□□ -0.33
PDCD4-202ENST00000393104 EFCC1Q9HA90 598 aa13□□□□□ -0.33
PDCD4-202ENST00000393104 KCNJ14Q9UNX9 436 aa13□□□□□ -0.33
PDCD4-202ENST00000393104 MYH14Q7Z406 1995 aaKnown RBP13□□□□□ -0.33
PDCD4-202ENST00000393104 B4E1Z4 1266 aa13□□□□□ -0.33
PDCD4-202ENST00000393104 NCAPH2Q6IBW4 605 aa13□□□□□ -0.33
PDCD4-202ENST00000393104 MLKLQ8NB16 471 aa13□□□□□ -0.33
PDCD4-202ENST00000393104 ZSWIM5Q9P217 1185 aa13□□□□□ -0.33
PDCD4-202ENST00000393104 STK36Q9NRP7 1315 aa13□□□□□ -0.33
PDCD4-202ENST00000393104 ZNF579Q8NAF0 562 aaKnown RBP13□□□□□ -0.33
PDCD4-202ENST00000393104 KAT2BQ92831 832 aa13□□□□□ -0.33
PDCD4-202ENST00000393104 NGLY1Q96IV0 654 aa13□□□□□ -0.33
PDCD4-202ENST00000393104 TSPYL1Q9H0U9 437 aa13□□□□□ -0.33
PDCD4-202ENST00000393104 CSRNP2Q9H175 543 aa13□□□□□ -0.33
PDCD4-202ENST00000393104 TAOK2Q9UL54 1235 aa13□□□□□ -0.33
PDCD4-202ENST00000393104 EIF3CLB5ME19 914 aaKnown RBP12.99□□□□□ -0.33
PDCD4-202ENST00000393104 AKR1B15C9JRZ8 316 aaPredicted RBP12.99□□□□□ -0.33
PDCD4-202ENST00000393104 SHOX2O60902 331 aaPredicted RBP12.99□□□□□ -0.33
PDCD4-202ENST00000393104 FMNL1O95466 1100 aaPredicted RBP12.99□□□□□ -0.33
PDCD4-202ENST00000393104 STARD3NLO95772 234 aa12.99□□□□□ -0.33
PDCD4-202ENST00000393104 CORO7P57737 925 aa12.99□□□□□ -0.33
PDCD4-202ENST00000393104 PDILTQ8N807 584 aa12.99□□□□□ -0.33
PDCD4-202ENST00000393104 EPSTI1Q96J88 318 aa12.99□□□□□ -0.33
PDCD4-202ENST00000393104 EIF3CQ99613 913 aaKnown RBP12.99□□□□□ -0.33
PDCD4-202ENST00000393104 RIPOR2Q9Y4F9 1068 aa12.99□□□□□ -0.33
PDCD4-202ENST00000393104 NKRFO15226 690 aaKnown RBP eCLIP12.99□□□□□ -0.33
PDCD4-202ENST00000393104 CSF1RP07333 972 aa12.99□□□□□ -0.33
PDCD4-202ENST00000393104 METAP2P50579 478 aaKnown RBP eCLIP12.99□□□□□ -0.33
PDCD4-202ENST00000393104 IL17AQ16552 155 aa12.99□□□□□ -0.33
PDCD4-202ENST00000393104 TRAPPC11Q7Z392 1133 aa12.99□□□□□ -0.33
PDCD4-202ENST00000393104 CMTR1Q8N1G2 835 aaKnown RBP12.99□□□□□ -0.33
PDCD4-202ENST00000393104 RIN2Q8WYP3 895 aaPredicted RBP12.99□□□□□ -0.33
PDCD4-202ENST00000393104 ISCA1Q9BUE6 129 aa12.99□□□□□ -0.33
PDCD4-202ENST00000393104 TRPC5Q9UL62 973 aaPredicted RBP12.99□□□□□ -0.33
PDCD4-202ENST00000393104 ASAP1Q9ULH1 1129 aa12.99□□□□□ -0.33
PDCD4-202ENST00000393104 SRPRBQ9Y5M8 271 aaKnown RBP12.99□□□□□ -0.33
PDCD4-202ENST00000393104 RCCD1A6NED2 376 aa12.99□□□□□ -0.33
PDCD4-202ENST00000393104 A1BGP04217 495 aa12.99□□□□□ -0.33
PDCD4-202ENST00000393104 CCDC175P0C221 793 aa12.99□□□□□ -0.33
PDCD4-202ENST00000393104 ERCC5P28715 1186 aaPredicted RBP12.99□□□□□ -0.33
PDCD4-202ENST00000393104 FUT2Q10981 343 aa12.99□□□□□ -0.33
PDCD4-202ENST00000393104 WDR59Q6PJI9 974 aa12.99□□□□□ -0.33
PDCD4-202ENST00000393104 SLC4A9Q96Q91 983 aa12.99□□□□□ -0.33
PDCD4-202ENST00000393104 HDAC6Q9UBN7 1215 aa12.99□□□□□ -0.33
PDCD4-202ENST00000393104 ERVV-1B6SEH8 477 aa12.98□□□□□ -0.33
PDCD4-202ENST00000393104 CPP00450 1065 aa12.98□□□□□ -0.33
PDCD4-202ENST00000393104 E2F4Q16254 413 aa12.98□□□□□ -0.33
PDCD4-202ENST00000393104 HDXQ7Z353 690 aa12.98□□□□□ -0.33
PDCD4-202ENST00000393104 TNFRSF25Q93038 417 aa12.98□□□□□ -0.33
PDCD4-202ENST00000393104 GJD4Q96KN9 370 aaPredicted RBP12.98□□□□□ -0.33
PDCD4-202ENST00000393104 C8orf37Q96NL8 207 aa12.98□□□□□ -0.33
PDCD4-202ENST00000393104 CHP1Q99653 195 aa12.98□□□□□ -0.33
PDCD4-202ENST00000393104 ABCC12Q96J65 1359 aa12.98□□□□□ -0.33
PDCD4-202ENST00000393104 QSER1Q2KHR3 1735 aa12.98□□□□□ -0.33
PDCD4-202ENST00000393104 PDE2AO00408 941 aaPredicted RBP12.98□□□□□ -0.33
PDCD4-202ENST00000393104 ZNF213O14771 459 aa12.98□□□□□ -0.33
PDCD4-202ENST00000393104 RHOXF2BP0C7M4 288 aa12.98□□□□□ -0.33
PDCD4-202ENST00000393104 IL6STP40189 918 aaPredicted RBP12.98□□□□□ -0.33
PDCD4-202ENST00000393104 ZNF569Q5MCW4 686 aa12.98□□□□□ -0.33
PDCD4-202ENST00000393104 RHOXF2Q9BQY4 288 aa12.98□□□□□ -0.33
PDCD4-202ENST00000393104 XDHP47989 1333 aa12.98□□□□□ -0.33
PDCD4-202ENST00000393104 AFF2P51816 1311 aa12.98□□□□□ -0.33
PDCD4-202ENST00000393104 ITIH6Q6UXX5 1313 aa12.98□□□□□ -0.33
PDCD4-202ENST00000393104 PKN1Q16512 942 aa12.98□□□□□ -0.33
PDCD4-202ENST00000393104 JAKMIP3Q5VZ66 844 aa12.98□□□□□ -0.33
PDCD4-202ENST00000393104 MICU3Q86XE3 530 aa12.98□□□□□ -0.33
PDCD4-202ENST00000393104 EHD4Q9H223 541 aa12.98□□□□□ -0.33
PDCD4-202ENST00000393104 WWC3Q9ULE0 1092 aa12.98□□□□□ -0.33
PDCD4-202ENST00000393104 CNTNAP4Q9C0A0 1308 aa12.97□□□□□ -0.33
PDCD4-202ENST00000393104 HERVK_113P62684 666 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms