RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 LDHCP07864 332 aa29.42■■■□□ 2.3
SMARCD3-203ENST00000392811 ATP2B1P20020 1258 aa29.42■■■□□ 2.3
SMARCD3-203ENST00000392811 LONRF3Q496Y0 759 aa29.42■■■□□ 2.3
SMARCD3-203ENST00000392811 SPECC1Q5M775 1068 aa29.42■■■□□ 2.3
SMARCD3-203ENST00000392811 NOL10Q9BSC4 688 aaKnown RBP29.42■■■□□ 2.3
SMARCD3-203ENST00000392811 FAM205CA6NFA0 338 aa29.42■■■□□ 2.3
SMARCD3-203ENST00000392811 POLRMTO00411 1230 aaKnown RBP29.42■■■□□ 2.3
SMARCD3-203ENST00000392811 IL1R1P14778 569 aa29.42■■■□□ 2.3
SMARCD3-203ENST00000392811 HOXA10P31260 410 aaPredicted RBP29.42■■■□□ 2.3
SMARCD3-203ENST00000392811 TFAP4Q01664 338 aa29.42■■■□□ 2.3
SMARCD3-203ENST00000392811 ROBO3Q96MS0 1386 aa29.41■■■□□ 2.3
SMARCD3-203ENST00000392811 KRBA2Q6ZNG9 492 aa29.41■■■□□ 2.3
SMARCD3-203ENST00000392811 TGFBRAP1Q8WUH2 860 aa29.41■■■□□ 2.3
SMARCD3-203ENST00000392811 RTFDC1Q9BY42 306 aaPredicted RBP29.41■■■□□ 2.3
SMARCD3-203ENST00000392811 CEP131Q9UPN4 1083 aa29.41■■■□□ 2.3
SMARCD3-203ENST00000392811 NAV1Q8NEY1 1877 aa29.41■■■□□ 2.3
SMARCD3-203ENST00000392811 EP400Q96L91 3159 aa29.41■■■□□ 2.3
SMARCD3-203ENST00000392811 TERF1P54274 439 aa29.4■■■□□ 2.3
SMARCD3-203ENST00000392811 PNOCQ13519 176 aa29.4■■■□□ 2.3
SMARCD3-203ENST00000392811 EARS2Q5JPH6 523 aaKnown RBP29.4■■■□□ 2.3
SMARCD3-203ENST00000392811 METTL16Q86W50 562 aaKnown RBP29.4■■■□□ 2.3
SMARCD3-203ENST00000392811 IL17RBQ9NRM6 502 aa29.4■■■□□ 2.3
SMARCD3-203ENST00000392811 PODXL2Q9NZ53 605 aa29.4■■■□□ 2.3
SMARCD3-203ENST00000392811 CCDC144BQ3MJ40 725 aa29.39■■■□□ 2.3
SMARCD3-203ENST00000392811 ISM2Q6H9L7 571 aa29.39■■■□□ 2.3
SMARCD3-203ENST00000392811 CNNM3Q8NE01 707 aa29.39■■■□□ 2.3
SMARCD3-203ENST00000392811 POLLQ9UGP5 575 aa29.39■■■□□ 2.3
SMARCD3-203ENST00000392811 SRPRBQ9Y5M8 271 aaKnown RBP29.39■■■□□ 2.3
SMARCD3-203ENST00000392811 TPM2P07951 284 aa29.38■■■□□ 2.29
SMARCD3-203ENST00000392811 AMOTL1Q8IY63 956 aa29.38■■■□□ 2.29
SMARCD3-203ENST00000392811 ZNF579Q8NAF0 562 aaKnown RBP29.38■■■□□ 2.29
SMARCD3-203ENST00000392811 TBC1D16Q8TBP0 767 aa29.38■■■□□ 2.29
SMARCD3-203ENST00000392811 CRAMP1Q96RY5 1269 aa29.38■■■□□ 2.29
SMARCD3-203ENST00000392811 FAM13BQ9NYF5 915 aa29.38■■■□□ 2.29
SMARCD3-203ENST00000392811 NT5C2P49902 561 aa29.38■■■□□ 2.29
SMARCD3-203ENST00000392811 LRMPQ12912 555 aa29.38■■■□□ 2.29
SMARCD3-203ENST00000392811 NPY5RQ15761 445 aa29.38■■■□□ 2.29
SMARCD3-203ENST00000392811 PROM2Q8N271 834 aa29.38■■■□□ 2.29
SMARCD3-203ENST00000392811 KAT14Q9H8E8 782 aa29.38■■■□□ 2.29
SMARCD3-203ENST00000392811 TRIM75PA6NK02 468 aa29.37■■■□□ 2.29
SMARCD3-203ENST00000392811 TXNRD1Q16881 649 aa29.37■■■□□ 2.29
SMARCD3-203ENST00000392811 DGKHQ86XP1 1220 aa29.37■■■□□ 2.29
SMARCD3-203ENST00000392811 MAPKAPK5Q8IW41 473 aa29.37■■■□□ 2.29
SMARCD3-203ENST00000392811 MKNK2Q9HBH9 465 aa29.37■■■□□ 2.29
SMARCD3-203ENST00000392811 KLRG2A4D1S0 409 aaPredicted RBP29.37■■■□□ 2.29
SMARCD3-203ENST00000392811 BTDP43251 543 aa29.37■■■□□ 2.29
SMARCD3-203ENST00000392811 TNFRSF25Q93038 417 aa29.37■■■□□ 2.29
SMARCD3-203ENST00000392811 BRMS1Q9HCU9 246 aa29.37■■■□□ 2.29
SMARCD3-203ENST00000392811 DNTTIP2Q5QJE6 756 aaKnown RBP29.36■■■□□ 2.29
SMARCD3-203ENST00000392811 ANKS1AQ92625 1134 aa29.36■■■□□ 2.29
SMARCD3-203ENST00000392811 SAP30BPQ9UHR5 308 aaKnown RBP29.36■■■□□ 2.29
SMARCD3-203ENST00000392811 CDK5RAP2Q96SN8 1893 aa29.35■■■□□ 2.29
SMARCD3-203ENST00000392811 SCG2P13521 617 aa29.35■■■□□ 2.29
SMARCD3-203ENST00000392811 KIF5BP33176 963 aa29.35■■■□□ 2.29
SMARCD3-203ENST00000392811 PLCD1P51178 756 aa29.35■■■□□ 2.29
SMARCD3-203ENST00000392811 ELOA2Q8IYF1 753 aaPredicted RBP29.35■■■□□ 2.29
SMARCD3-203ENST00000392811 GPR75-ASB3A0A0A6YYF3 556 aa29.35■■■□□ 2.29
SMARCD3-203ENST00000392811 NCAPHQ15003 741 aa29.35■■■□□ 2.29
SMARCD3-203ENST00000392811 FOXP4Q8IVH2 680 aaPredicted RBP29.35■■■□□ 2.29
SMARCD3-203ENST00000392811 SLC44A5Q8NCS7 719 aa29.35■■■□□ 2.29
SMARCD3-203ENST00000392811 MORC2Q9Y6X9 1032 aaPredicted RBP29.35■■■□□ 2.29
SMARCD3-203ENST00000392811 MDM2Q00987 491 aaPredicted RBP29.34■■■□□ 2.29
SMARCD3-203ENST00000392811 PFKFB3Q16875 520 aaPredicted RBP29.34■■■□□ 2.29
SMARCD3-203ENST00000392811 NOM1Q5C9Z4 860 aaKnown RBP29.34■■■□□ 2.29
SMARCD3-203ENST00000392811 CERS3Q8IU89 383 aa29.34■■■□□ 2.29
SMARCD3-203ENST00000392811 PNMA1Q8ND90 353 aa29.34■■■□□ 2.29
SMARCD3-203ENST00000392811 CACTINQ8WUQ7 758 aaKnown RBP29.34■■■□□ 2.29
SMARCD3-203ENST00000392811 CSRNP2Q9H175 543 aa29.34■■■□□ 2.29
SMARCD3-203ENST00000392811 LTBP1Q14766 1721 aa29.34■■■□□ 2.29
SMARCD3-203ENST00000392811 USP17L3A6NCW0 530 aa29.33■■■□□ 2.29
SMARCD3-203ENST00000392811 USP17L4A6NCW7 530 aa29.33■■■□□ 2.29
SMARCD3-203ENST00000392811 SMTNL1A8MU46 457 aa29.33■■■□□ 2.29
SMARCD3-203ENST00000392811 C6orf229H3BNL8 230 aa29.33■■■□□ 2.29
SMARCD3-203ENST00000392811 FOXN1O15353 648 aa29.33■■■□□ 2.29
SMARCD3-203ENST00000392811 POLR2DO15514 142 aaKnown RBP29.33■■■□□ 2.29
SMARCD3-203ENST00000392811 MFSD14BQ5SR56 506 aa29.33■■■□□ 2.29
SMARCD3-203ENST00000392811 USP17L1Q7RTZ2 530 aa29.33■■■□□ 2.29
SMARCD3-203ENST00000392811 PCDHA5Q9Y5H7 936 aa29.33■■■□□ 2.29
SMARCD3-203ENST00000392811 LRRC37AA6NMS7 1700 aa29.33■■■□□ 2.29
SMARCD3-203ENST00000392811 TSPY3P0CV98 308 aa29.33■■■□□ 2.29
SMARCD3-203ENST00000392811 TSPY8P0CW00 308 aa29.33■■■□□ 2.29
SMARCD3-203ENST00000392811 BAZ2BQ9UIF8 2168 aaKnown RBP29.33■■■□□ 2.29
SMARCD3-203ENST00000392811 WNT7AO00755 349 aa29.32■■■□□ 2.28
SMARCD3-203ENST00000392811 VEGFAP15692 232 aaPredicted RBP29.32■■■□□ 2.28
SMARCD3-203ENST00000392811 ZNF444Q8N0Y2 327 aaPredicted RBP29.32■■■□□ 2.28
SMARCD3-203ENST00000392811 TCP11L1Q9NUJ3 509 aa29.32■■■□□ 2.28
SMARCD3-203ENST00000392811 IKBKBO14920 756 aa29.32■■■□□ 2.28
SMARCD3-203ENST00000392811 CCDC178Q5BJE1 867 aa29.32■■■□□ 2.28
SMARCD3-203ENST00000392811 USP49Q70CQ1 688 aa29.32■■■□□ 2.28
SMARCD3-203ENST00000392811 TEX11Q8IYF3 940 aa29.32■■■□□ 2.28
SMARCD3-203ENST00000392811 SERTAD1Q9UHV2 236 aa29.32■■■□□ 2.28
SMARCD3-203ENST00000392811 HOOK1Q9UJC3 728 aaKnown RBP29.32■■■□□ 2.28
SMARCD3-203ENST00000392811 PPEF1O14829 653 aaPredicted RBP29.31■■■□□ 2.28
SMARCD3-203ENST00000392811 RASA1P20936 1047 aa29.31■■■□□ 2.28
SMARCD3-203ENST00000392811 TPM4P67936 248 aa29.31■■■□□ 2.28
SMARCD3-203ENST00000392811 NLRP5P59047 1200 aa29.3■■■□□ 2.28
SMARCD3-203ENST00000392811 GRM4Q14833 912 aa29.3■■■□□ 2.28
SMARCD3-203ENST00000392811 TBC1D22AQ8WUA7 517 aa29.3■■■□□ 2.28
SMARCD3-203ENST00000392811 DDX60LQ5H9U9 1706 aaKnown RBP29.3■■■□□ 2.28
SMARCD3-203ENST00000392811 ANKRD31Q8N7Z5 1873 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms