RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 SH3BGRP55822 239 aaPredicted RBP4.4□□□□□ -1.7
UBR3-202ENST00000392632 DIXDC1Q155Q3 683 aa4.4□□□□□ -1.7
UBR3-202ENST00000392632 TMTC4Q5T4D3 741 aa4.4□□□□□ -1.7
UBR3-202ENST00000392632 RUFY4Q6ZNE9 571 aa4.4□□□□□ -1.7
UBR3-202ENST00000392632 NCAPG2Q86XI2 1143 aa4.4□□□□□ -1.7
UBR3-202ENST00000392632 C2CD5Q86YS7 1000 aa4.4□□□□□ -1.7
UBR3-202ENST00000392632 SKA2Q8WVK7 121 aaPredicted RBP4.4□□□□□ -1.7
UBR3-202ENST00000392632 UBE2Q2Q8WVN8 375 aa4.4□□□□□ -1.7
UBR3-202ENST00000392632 CDKL2Q92772 493 aa4.4□□□□□ -1.7
UBR3-202ENST00000392632 ATP6V0A1Q93050 837 aa4.4□□□□□ -1.7
UBR3-202ENST00000392632 C16orf45Q96MC5 204 aaPredicted RBP4.4□□□□□ -1.7
UBR3-202ENST00000392632 LBHD1Q9BQE6 289 aaPredicted RBP4.4□□□□□ -1.7
UBR3-202ENST00000392632 C14orf93Q9H972 538 aaKnown RBP4.4□□□□□ -1.7
UBR3-202ENST00000392632 LRWD1Q9UFC0 647 aa4.4□□□□□ -1.7
UBR3-202ENST00000392632 RBM8AQ9Y5S9 174 aaKnown RBP4.4□□□□□ -1.7
UBR3-202ENST00000392632 KAT6BQ8WYB5 2073 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.4□□□□□ -1.71
UBR3-202ENST00000392632 EYA2O00167 538 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 IPO5O00410 1097 aaKnown RBP4.4□□□□□ -1.71
UBR3-202ENST00000392632 SMARCA5O60264 1052 aaPredicted RBP4.4□□□□□ -1.71
UBR3-202ENST00000392632 TRIM37O94972 964 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 GSTA1P08263 222 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 GSTA2P09210 222 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 ANXA13P27216 316 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 MAN1A1P33908 653 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 GARSP41250 739 aaKnown RBP4.4□□□□□ -1.71
UBR3-202ENST00000392632 RPS8P62241 208 aaKnown RBP4.4□□□□□ -1.71
UBR3-202ENST00000392632 C16orf72Q14CZ0 275 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 IQCB1Q15051 598 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 ZYXQ15942 572 aaKnown RBP4.4□□□□□ -1.71
UBR3-202ENST00000392632 HHATQ5VTY9 493 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 TTC23LQ6PF05 361 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 MYCT1Q8N699 235 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 CEP120Q8N960 986 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 PLBD2Q8NHP8 589 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 CACTINQ8WUQ7 758 aaKnown RBP4.4□□□□□ -1.71
UBR3-202ENST00000392632 LPIN2Q92539 896 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 INO80BQ9C086 356 aaPredicted RBP4.4□□□□□ -1.71
UBR3-202ENST00000392632 PPANQ9NQ55 473 aaKnown RBP4.4□□□□□ -1.71
UBR3-202ENST00000392632 ST7Q9NRC1 585 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 OLFML3Q9NRN5 406 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 CTTNBP2NLQ9P2B4 639 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 CHPF2Q9P2E5 772 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 PPME1Q9Y570 386 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.4□□□□□ -1.71
UBR3-202ENST00000392632 LRRC9Q6ZRR7 1453 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 SOS2Q07890 1332 aaPredicted RBP4.4□□□□□ -1.71
UBR3-202ENST00000392632 KIAA0586Q9BVV6 1533 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 EBAG9O00559 213 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 FMNL1O95466 1100 aaPredicted RBP4.4□□□□□ -1.71
UBR3-202ENST00000392632 POLR2MP0CAP2 368 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 ATP8B2P98198 1209 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 ITKQ08881 620 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 PPP2R5CQ13362 524 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 PTK2BQ14289 1009 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 KRT81Q14533 505 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 ASIC2Q16515 512 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 FBXO31Q5XUX0 539 aaPredicted RBP4.4□□□□□ -1.71
UBR3-202ENST00000392632 NCAPH2Q6IBW4 605 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 SMC5Q8IY18 1101 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 RYBPQ8N488 228 aaPredicted RBP4.4□□□□□ -1.71
UBR3-202ENST00000392632 MIGA1Q8NAN2 632 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 NOC4LQ9BVI4 516 aaKnown RBP4.4□□□□□ -1.71
UBR3-202ENST00000392632 SLITRK6Q9H5Y7 841 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 C1orf112Q9NSG2 853 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 MROH5Q6ZUA9 1318 aa4.4□□□□□ -1.71
UBR3-202ENST00000392632 DNAJC8O75937 253 aaPredicted RBP4.39□□□□□ -1.71
UBR3-202ENST00000392632 MBD4O95243 580 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 KCNA6P17658 529 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 PTGS1P23219 599 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 NOP14P78316 857 aaKnown RBP4.39□□□□□ -1.71
UBR3-202ENST00000392632 TBCCQ15814 346 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 GPATCH4Q5T3I0 446 aaKnown RBP4.39□□□□□ -1.71
UBR3-202ENST00000392632 ANKRD20A3Q5VUR7 823 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 ARMCX2Q7L311 632 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 GBP7Q8N8V2 638 aaPredicted RBP4.39□□□□□ -1.71
UBR3-202ENST00000392632 FAM71BQ8TC56 605 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 SNX29Q8TEQ0 813 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 COA7Q96BR5 231 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 SLC10A4Q96EP9 437 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 PLCB1Q9NQ66 1216 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 TRMT1Q9NXH9 659 aaKnown RBP4.39□□□□□ -1.71
UBR3-202ENST00000392632 ASIC3Q9UHC3 531 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 UTP11Q9Y3A2 253 aaKnown RBP4.39□□□□□ -1.71
UBR3-202ENST00000392632 EHBP1L1Q8N3D4 1523 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 UHRF1BP1Q6BDS2 1440 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 SNAPC4Q5SXM2 1469 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 EIF3CLB5ME19 914 aaKnown RBP4.39□□□□□ -1.71
UBR3-202ENST00000392632 ZSCAN22P10073 491 aaPredicted RBP4.39□□□□□ -1.71
UBR3-202ENST00000392632 ALAS1P13196 640 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 INPP1P49441 399 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 SURF1Q15526 300 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 TADA2BQ86TJ2 420 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 REXO1Q8N1G1 1221 aaKnown RBP4.39□□□□□ -1.71
UBR3-202ENST00000392632 EFHBQ8N7U6 833 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 EIF3CQ99613 913 aaKnown RBP4.39□□□□□ -1.71
UBR3-202ENST00000392632 KIF2CQ99661 725 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 USP40Q9NVE5 1235 aa4.39□□□□□ -1.71
UBR3-202ENST00000392632 ARPP21Q9UBL0 812 aaPredicted RBP4.39□□□□□ -1.71
UBR3-202ENST00000392632 TTF2Q9UNY4 1162 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms