RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 GALK1P51570 392 aa3.5□□□□□ -1.85
RNU6-239P-201ENST00000390990 PRAMEF13Q5VWM6 474 aa3.5□□□□□ -1.85
RNU6-239P-201ENST00000390990 LLGL2Q6P1M3 1020 aa3.5□□□□□ -1.85
RNU6-239P-201ENST00000390990 NXPE4Q6UWF7 544 aa3.5□□□□□ -1.85
RNU6-239P-201ENST00000390990 TPTE2Q6XPS3 522 aa3.5□□□□□ -1.85
RNU6-239P-201ENST00000390990 LILRA2Q8N149 483 aa3.5□□□□□ -1.85
RNU6-239P-201ENST00000390990 SYT8Q8NBV8 401 aa3.5□□□□□ -1.85
RNU6-239P-201ENST00000390990 SHISA4Q96DD7 197 aa3.5□□□□□ -1.85
RNU6-239P-201ENST00000390990 BORCS6Q96GS4 357 aa3.5□□□□□ -1.85
RNU6-239P-201ENST00000390990 Q96M66 194 aa3.5□□□□□ -1.85
RNU6-239P-201ENST00000390990 WNT10AQ9GZT5 417 aa3.5□□□□□ -1.85
RNU6-239P-201ENST00000390990 ADAM7Q9H2U9 754 aa3.5□□□□□ -1.85
RNU6-239P-201ENST00000390990 TUT1Q9H6E5 874 aaKnown RBP3.5□□□□□ -1.85
RNU6-239P-201ENST00000390990 CWC22Q9HCG8 908 aaKnown RBP3.5□□□□□ -1.85
RNU6-239P-201ENST00000390990 EPB41L4AQ9HCS5 686 aaPredicted RBP3.5□□□□□ -1.85
RNU6-239P-201ENST00000390990 NLRP2Q9NX02 1062 aa3.5□□□□□ -1.85
RNU6-239P-201ENST00000390990 EGFL7Q9UHF1 273 aa3.5□□□□□ -1.85
RNU6-239P-201ENST00000390990 SLC22A31A6NKX4 558 aa3.49□□□□□ -1.85
RNU6-239P-201ENST00000390990 CST3P01034 146 aaPredicted RBP3.49□□□□□ -1.85
RNU6-239P-201ENST00000390990 INSRRP14616 1297 aa3.49□□□□□ -1.85
RNU6-239P-201ENST00000390990 SERPINB4P48594 390 aa3.49□□□□□ -1.85
RNU6-239P-201ENST00000390990 AFF3P51826 1226 aaKnown RBP3.49□□□□□ -1.85
RNU6-239P-201ENST00000390990 EGR3Q06889 387 aa3.49□□□□□ -1.85
RNU6-239P-201ENST00000390990 KRTAP1-1Q07627 177 aa3.49□□□□□ -1.85
RNU6-239P-201ENST00000390990 EFEMP1Q12805 493 aa3.49□□□□□ -1.85
RNU6-239P-201ENST00000390990 NR0B2Q15466 257 aa3.49□□□□□ -1.85
RNU6-239P-201ENST00000390990 ZNF746Q6NUN9 644 aaPredicted RBP3.49□□□□□ -1.85
RNU6-239P-201ENST00000390990 GLYCTKQ8IVS8 523 aa3.49□□□□□ -1.85
RNU6-239P-201ENST00000390990 OXR1Q8N573 874 aa3.49□□□□□ -1.85
RNU6-239P-201ENST00000390990 PIWIL2Q8TC59 973 aaKnown RBP3.49□□□□□ -1.85
RNU6-239P-201ENST00000390990 TMC1Q8TDI8 760 aa3.49□□□□□ -1.85
RNU6-239P-201ENST00000390990 PLPPR2Q96GM1 343 aa3.49□□□□□ -1.85
RNU6-239P-201ENST00000390990 CITED4Q96RK1 184 aa3.49□□□□□ -1.85
RNU6-239P-201ENST00000390990 EBF1Q9UH73 591 aa3.49□□□□□ -1.85
RNU6-239P-201ENST00000390990 FITM1A5D6W6 292 aa3.48□□□□□ -1.85
RNU6-239P-201ENST00000390990 FBXO24O75426 580 aa3.48□□□□□ -1.85
RNU6-239P-201ENST00000390990 CYP7A1P22680 504 aa3.48□□□□□ -1.85
RNU6-239P-201ENST00000390990 CDK8P49336 464 aa3.48□□□□□ -1.85
RNU6-239P-201ENST00000390990 EPHB3P54753 998 aa3.48□□□□□ -1.85
RNU6-239P-201ENST00000390990 ETF1P62495 437 aaKnown RBP3.48□□□□□ -1.85
RNU6-239P-201ENST00000390990 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.48□□□□□ -1.85
RNU6-239P-201ENST00000390990 HID1Q8IV36 788 aa3.48□□□□□ -1.85
RNU6-239P-201ENST00000390990 CCDC97Q96F63 343 aaPredicted RBP3.48□□□□□ -1.85
RNU6-239P-201ENST00000390990 SIGLEC10Q96LC7 697 aa3.48□□□□□ -1.85
RNU6-239P-201ENST00000390990 DUSP13Q9UII6 198 aa3.48□□□□□ -1.85
RNU6-239P-201ENST00000390990 MBD1Q9UIS9 605 aaPredicted RBP3.48□□□□□ -1.85
RNU6-239P-201ENST00000390990 SERPINA10Q9UK55 444 aa3.48□□□□□ -1.85
RNU6-239P-201ENST00000390990 IRAK3Q9Y616 596 aa3.48□□□□□ -1.85
RNU6-239P-201ENST00000390990 NOTOA8MTQ0 251 aa3.47□□□□□ -1.85
RNU6-239P-201ENST00000390990 EFEMP2O95967 443 aa3.47□□□□□ -1.85
RNU6-239P-201ENST00000390990 PUM1Q14671 1186 aaKnown RBP eCLIP3.47□□□□□ -1.85
RNU6-239P-201ENST00000390990 LRRC14Q15048 493 aa3.47□□□□□ -1.85
RNU6-239P-201ENST00000390990 SPATS1Q496A3 300 aa3.47□□□□□ -1.85
RNU6-239P-201ENST00000390990 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.47□□□□□ -1.85
RNU6-239P-201ENST00000390990 ERICH6BQ5W0A0 696 aa3.47□□□□□ -1.85
RNU6-239P-201ENST00000390990 HDXQ7Z353 690 aa3.47□□□□□ -1.85
RNU6-239P-201ENST00000390990 COX4I2Q96KJ9 171 aa3.47□□□□□ -1.85
RNU6-239P-201ENST00000390990 TEPSINQ96N21 525 aa3.47□□□□□ -1.85
RNU6-239P-201ENST00000390990 DPH2Q9BQC3 489 aaPredicted RBP3.47□□□□□ -1.85
RNU6-239P-201ENST00000390990 GPR160Q9UJ42 338 aa3.47□□□□□ -1.85
RNU6-239P-201ENST00000390990 SAMM50Q9Y512 469 aa3.47□□□□□ -1.85
RNU6-239P-201ENST00000390990 PCDHA11Q9Y5I1 949 aa3.47□□□□□ -1.85
RNU6-239P-201ENST00000390990 AKAP8O43823 692 aaKnown RBP3.46□□□□□ -1.86
RNU6-239P-201ENST00000390990 SRSF3P84103 164 aaKnown RBP3.46□□□□□ -1.86
RNU6-239P-201ENST00000390990 PLP2Q04941 152 aa3.46□□□□□ -1.86
RNU6-239P-201ENST00000390990 SNX17Q15036 470 aa3.46□□□□□ -1.86
RNU6-239P-201ENST00000390990 SCARA3Q6AZY7 606 aa3.46□□□□□ -1.86
RNU6-239P-201ENST00000390990 TSPYL5Q86VY4 417 aaPredicted RBP3.46□□□□□ -1.86
RNU6-239P-201ENST00000390990 SIRT2Q8IXJ6 389 aa3.46□□□□□ -1.86
RNU6-239P-201ENST00000390990 ALKBH8Q96BT7 664 aaKnown RBP3.46□□□□□ -1.86
RNU6-239P-201ENST00000390990 CEP44Q9C0F1 390 aa3.46□□□□□ -1.86
RNU6-239P-201ENST00000390990 CNTD2Q9H8S5 307 aa3.46□□□□□ -1.86
RNU6-239P-201ENST00000390990 CYP8B1Q9UNU6 501 aa3.46□□□□□ -1.86
RNU6-239P-201ENST00000390990 OR14I1A6ND48 311 aa3.45□□□□□ -1.86
RNU6-239P-201ENST00000390990 N4BP3O15049 544 aa3.45□□□□□ -1.86
RNU6-239P-201ENST00000390990 SUV39H1O43463 412 aa3.45□□□□□ -1.86
RNU6-239P-201ENST00000390990 CELA3AP09093 270 aa3.45□□□□□ -1.86
RNU6-239P-201ENST00000390990 GRK4P32298 578 aa3.45□□□□□ -1.86
RNU6-239P-201ENST00000390990 WIPI1Q5MNZ9 446 aaPredicted RBP3.45□□□□□ -1.86
RNU6-239P-201ENST00000390990 SPPL2CQ8IUH8 684 aa3.45□□□□□ -1.86
RNU6-239P-201ENST00000390990 TMEFF1Q8IYR6 380 aa3.45□□□□□ -1.86
RNU6-239P-201ENST00000390990 DNAJB8Q8NHS0 232 aa3.45□□□□□ -1.86
RNU6-239P-201ENST00000390990 DHX38Q92620 1227 aaKnown RBP3.45□□□□□ -1.86
RNU6-239P-201ENST00000390990 GAL3ST3Q96A11 431 aa3.45□□□□□ -1.86
RNU6-239P-201ENST00000390990 BDH2Q9BUT1 245 aa3.45□□□□□ -1.86
RNU6-239P-201ENST00000390990 GPR62Q9BZJ7 368 aa3.45□□□□□ -1.86
RNU6-239P-201ENST00000390990 TRIT1Q9H3H1 467 aaKnown RBP3.45□□□□□ -1.86
RNU6-239P-201ENST00000390990 GPATCH2Q9NW75 528 aa3.45□□□□□ -1.86
RNU6-239P-201ENST00000390990 TJP2Q9UDY2 1190 aa3.45□□□□□ -1.86
RNU6-239P-201ENST00000390990 ZC3H12DA2A288 527 aaKnown RBP3.44□□□□□ -1.86
RNU6-239P-201ENST00000390990 IRS4O14654 1257 aaPredicted RBP3.44□□□□□ -1.86
RNU6-239P-201ENST00000390990 PRICKLE3O43900 615 aaPredicted RBP3.44□□□□□ -1.86
RNU6-239P-201ENST00000390990 LTKP29376 864 aa3.44□□□□□ -1.86
RNU6-239P-201ENST00000390990 ETV3P41162 512 aa3.44□□□□□ -1.86
RNU6-239P-201ENST00000390990 ADGRF1Q5T601 910 aa3.44□□□□□ -1.86
RNU6-239P-201ENST00000390990 PCNX4Q63HM2 1172 aa3.44□□□□□ -1.86
RNU6-239P-201ENST00000390990 HHIPL2Q6UWX4 724 aa3.44□□□□□ -1.86
RNU6-239P-201ENST00000390990 FRMD5Q7Z6J6 570 aa3.44□□□□□ -1.86
RNU6-239P-201ENST00000390990 NLRX1Q86UT6 975 aa3.44□□□□□ -1.86
RNU6-239P-201ENST00000390990 SP8Q8IXZ3 490 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms