RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 ADCYAP1R1P41586 468 aa11.89□□□□□ -0.51
IFT88-203ENST00000389373 USP17L24Q0WX57 530 aa11.89□□□□□ -0.51
IFT88-203ENST00000389373 GRIN2CQ14957 1233 aa11.89□□□□□ -0.51
IFT88-203ENST00000389373 FOXP4Q8IVH2 680 aaPredicted RBP11.89□□□□□ -0.51
IFT88-203ENST00000389373 SPATA5Q8NB90 893 aa11.89□□□□□ -0.51
IFT88-203ENST00000389373 TRIM43Q96BQ3 446 aaPredicted RBP11.89□□□□□ -0.51
IFT88-203ENST00000389373 DNAJC18Q9H819 358 aa11.89□□□□□ -0.51
IFT88-203ENST00000389373 PDLIM7Q9NR12 457 aa11.89□□□□□ -0.51
IFT88-203ENST00000389373 PALD1Q9ULE6 856 aa11.89□□□□□ -0.51
IFT88-203ENST00000389373 GH2P01242 217 aa11.88□□□□□ -0.51
IFT88-203ENST00000389373 PRAMEF19Q5SWL8 479 aa11.88□□□□□ -0.51
IFT88-203ENST00000389373 FAM9BQ8IZU0 186 aa11.88□□□□□ -0.51
IFT88-203ENST00000389373 COPRSQ9NQ92 184 aa11.88□□□□□ -0.51
IFT88-203ENST00000389373 BTBD7Q9P203 1132 aa11.88□□□□□ -0.51
IFT88-203ENST00000389373 MAST2Q6P0Q8 1798 aa11.87□□□□□ -0.51
IFT88-203ENST00000389373 ZBTB22O15209 634 aa11.87□□□□□ -0.51
IFT88-203ENST00000389373 HLA-DOAP06340 250 aa11.87□□□□□ -0.51
IFT88-203ENST00000389373 CYBAP13498 195 aa11.87□□□□□ -0.51
IFT88-203ENST00000389373 RAG1P15918 1043 aa11.87□□□□□ -0.51
IFT88-203ENST00000389373 TLE2Q04725 743 aa11.87□□□□□ -0.51
IFT88-203ENST00000389373 RAB3GAP1Q15042 981 aa11.87□□□□□ -0.51
IFT88-203ENST00000389373 NAA16Q6N069 864 aaPredicted RBP11.87□□□□□ -0.51
IFT88-203ENST00000389373 CATSPERGQ6ZRH7 1159 aa11.87□□□□□ -0.51
IFT88-203ENST00000389373 FAM122AQ96E09 287 aa11.87□□□□□ -0.51
IFT88-203ENST00000389373 SNRKQ9NRH2 765 aa11.87□□□□□ -0.51
IFT88-203ENST00000389373 GINM1Q9NU53 330 aa11.87□□□□□ -0.51
IFT88-203ENST00000389373 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.86□□□□□ -0.51
IFT88-203ENST00000389373 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.86□□□□□ -0.51
IFT88-203ENST00000389373 HOXC6P09630 235 aa11.86□□□□□ -0.51
IFT88-203ENST00000389373 PLCG2P16885 1265 aa11.86□□□□□ -0.51
IFT88-203ENST00000389373 DNAJB2P25686 324 aa11.86□□□□□ -0.51
IFT88-203ENST00000389373 EPHB4P54760 987 aa11.86□□□□□ -0.51
IFT88-203ENST00000389373 GRB14Q14449 540 aa11.86□□□□□ -0.51
IFT88-203ENST00000389373 HDAC5Q9UQL6 1122 aa11.86□□□□□ -0.51
IFT88-203ENST00000389373 TACC3Q9Y6A5 838 aa11.86□□□□□ -0.51
IFT88-203ENST00000389373 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.86□□□□□ -0.51
IFT88-203ENST00000389373 FLT1P17948 1338 aa11.86□□□□□ -0.51
IFT88-203ENST00000389373 SEPT4O43236 478 aa11.85□□□□□ -0.51
IFT88-203ENST00000389373 ITGB8P26012 769 aa11.85□□□□□ -0.51
IFT88-203ENST00000389373 ADORA2AP29274 412 aa11.85□□□□□ -0.51
IFT88-203ENST00000389373 MCAMP43121 646 aa11.85□□□□□ -0.51
IFT88-203ENST00000389373 USP14P54578 494 aa11.85□□□□□ -0.51
IFT88-203ENST00000389373 LRRC41Q15345 812 aa11.85□□□□□ -0.51
IFT88-203ENST00000389373 CCDC85BQ15834 202 aaPredicted RBP11.85□□□□□ -0.51
IFT88-203ENST00000389373 ATF7IPQ6VMQ6 1270 aa11.85□□□□□ -0.51
IFT88-203ENST00000389373 GAS2L1Q99501 681 aaPredicted RBP11.85□□□□□ -0.51
IFT88-203ENST00000389373 ZNF576Q9H609 170 aa11.85□□□□□ -0.51
IFT88-203ENST00000389373 SMC4Q9NTJ3 1288 aa11.85□□□□□ -0.51
IFT88-203ENST00000389373 LTBP2Q14767 1821 aa11.84□□□□□ -0.51
IFT88-203ENST00000389373 FRMPD3Q5JV73 1810 aa11.84□□□□□ -0.51
IFT88-203ENST00000389373 SRGAP3O43295 1099 aa11.84□□□□□ -0.51
IFT88-203ENST00000389373 PQBP1O60828 265 aaKnown RBP11.84□□□□□ -0.51
IFT88-203ENST00000389373 CLTBP09497 229 aa11.84□□□□□ -0.51
IFT88-203ENST00000389373 VCAM1P19320 739 aa11.84□□□□□ -0.51
IFT88-203ENST00000389373 PLA2G5P39877 138 aa11.84□□□□□ -0.51
IFT88-203ENST00000389373 DYNLL1P63167 89 aaKnown RBP11.84□□□□□ -0.51
IFT88-203ENST00000389373 FPGSQ05932 587 aa11.84□□□□□ -0.51
IFT88-203ENST00000389373 FAM47AQ5JRC9 791 aa11.84□□□□□ -0.51
IFT88-203ENST00000389373 SAMD1Q6SPF0 538 aaPredicted RBP11.84□□□□□ -0.51
IFT88-203ENST00000389373 CCDC129Q6ZRS4 1044 aa11.84□□□□□ -0.51
IFT88-203ENST00000389373 IL27Q8NEV9 243 aa11.84□□□□□ -0.51
IFT88-203ENST00000389373 ACER1Q8TDN7 264 aa11.84□□□□□ -0.51
IFT88-203ENST00000389373 C12orf42Q96LP6 360 aa11.84□□□□□ -0.51
IFT88-203ENST00000389373 RPAP3Q9H6T3 665 aaPredicted RBP11.84□□□□□ -0.51
IFT88-203ENST00000389373 TMEM39AQ9NV64 488 aa11.84□□□□□ -0.51
IFT88-203ENST00000389373 SPDYE16A6NNV3 312 aaPredicted RBP11.83□□□□□ -0.52
IFT88-203ENST00000389373 COBLO75128 1261 aa11.83□□□□□ -0.52
IFT88-203ENST00000389373 UQCRFS1P1P0C7P4 283 aa11.83□□□□□ -0.52
IFT88-203ENST00000389373 ARID4AP29374 1257 aaPredicted RBP11.83□□□□□ -0.52
IFT88-203ENST00000389373 USP5P45974 858 aa11.83□□□□□ -0.52
IFT88-203ENST00000389373 PPP4CP60510 307 aa11.83□□□□□ -0.52
IFT88-203ENST00000389373 MAPK8IP2Q13387 824 aaPredicted RBP11.83□□□□□ -0.52
IFT88-203ENST00000389373 PLS1Q14651 629 aa11.83□□□□□ -0.52
IFT88-203ENST00000389373 SNX17Q15036 470 aa11.83□□□□□ -0.52
IFT88-203ENST00000389373 TTC39AQ5SRH9 613 aa11.83□□□□□ -0.52
IFT88-203ENST00000389373 OLFML2BQ68BL8 750 aa11.83□□□□□ -0.52
IFT88-203ENST00000389373 METTL16Q86W50 562 aaKnown RBP11.83□□□□□ -0.52
IFT88-203ENST00000389373 ADAMTS19Q8TE59 1207 aa11.83□□□□□ -0.52
IFT88-203ENST00000389373 ATXN2LQ8WWM7 1075 aaKnown RBP11.83□□□□□ -0.52
IFT88-203ENST00000389373 TIFAQ96CG3 184 aa11.83□□□□□ -0.52
IFT88-203ENST00000389373 ASB2Q96Q27 587 aa11.83□□□□□ -0.52
IFT88-203ENST00000389373 MEIS3Q99687 375 aa11.83□□□□□ -0.52
IFT88-203ENST00000389373 MOV10L1Q9BXT6 1211 aaKnown RBP11.83□□□□□ -0.52
IFT88-203ENST00000389373 PRDM12Q9H4Q4 367 aa11.83□□□□□ -0.52
IFT88-203ENST00000389373 CABP5Q9NP86 173 aa11.83□□□□□ -0.52
IFT88-203ENST00000389373 SLC5A4Q9NY91 659 aa11.83□□□□□ -0.52
IFT88-203ENST00000389373 THEGQ9P2T0 379 aa11.83□□□□□ -0.52
IFT88-203ENST00000389373 EYSQ5T1H1 3165 aa11.83□□□□□ -0.52
IFT88-203ENST00000389373 STRNO43815 780 aa11.82□□□□□ -0.52
IFT88-203ENST00000389373 PGK1P00558 417 aa11.82□□□□□ -0.52
IFT88-203ENST00000389373 ERCC3P19447 782 aa11.82□□□□□ -0.52
IFT88-203ENST00000389373 IGFBP4P22692 258 aa11.82□□□□□ -0.52
IFT88-203ENST00000389373 MAP3K12Q12852 859 aa11.82□□□□□ -0.52
IFT88-203ENST00000389373 G3BP1Q13283 466 aaKnown RBP eCLIP11.82□□□□□ -0.52
IFT88-203ENST00000389373 ABCB5Q2M3G0 1257 aa11.82□□□□□ -0.52
IFT88-203ENST00000389373 CERKLQ49MI3 558 aaPredicted RBP11.82□□□□□ -0.52
IFT88-203ENST00000389373 ADGRA1Q86SQ6 560 aa11.82□□□□□ -0.52
IFT88-203ENST00000389373 NCAPG2Q86XI2 1143 aa11.82□□□□□ -0.52
IFT88-203ENST00000389373 UHRF1Q96T88 793 aaPredicted RBP11.82□□□□□ -0.52
IFT88-203ENST00000389373 KIAA1683Q9H0B3 1180 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms