RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 CTR9Q6PD62 1173 aa13.87□□□□□ -0.19
SMARCE1-203ENST00000377808 NBPF11Q86T75 865 aa13.87□□□□□ -0.19
SMARCE1-203ENST00000377808 ACER1Q8TDN7 264 aa13.87□□□□□ -0.19
SMARCE1-203ENST00000377808 TAOK2Q9UL54 1235 aa13.87□□□□□ -0.19
SMARCE1-203ENST00000377808 SALL3Q9BXA9 1300 aa13.86□□□□□ -0.19
SMARCE1-203ENST00000377808 TRIM6-TRIM34B2RNG4 842 aa13.86□□□□□ -0.19
SMARCE1-203ENST00000377808 SMIM22K7EJ46 135 aa13.86□□□□□ -0.19
SMARCE1-203ENST00000377808 AKR1B1P15121 316 aa13.86□□□□□ -0.19
SMARCE1-203ENST00000377808 GNAT2P19087 354 aa13.86□□□□□ -0.19
SMARCE1-203ENST00000377808 GCLCP48506 637 aaPredicted RBP13.86□□□□□ -0.19
SMARCE1-203ENST00000377808 CDK8P49336 464 aa13.86□□□□□ -0.19
SMARCE1-203ENST00000377808 USP14P54578 494 aa13.86□□□□□ -0.19
SMARCE1-203ENST00000377808 ATP2B2Q01814 1243 aa13.86□□□□□ -0.19
SMARCE1-203ENST00000377808 PRKCZQ05513 592 aa13.86□□□□□ -0.19
SMARCE1-203ENST00000377808 TMEM179Q6ZVK1 233 aa13.86□□□□□ -0.19
SMARCE1-203ENST00000377808 SH3TC2Q8TF17 1288 aa13.86□□□□□ -0.19
SMARCE1-203ENST00000377808 SEC62Q99442 399 aaKnown RBP13.86□□□□□ -0.19
SMARCE1-203ENST00000377808 EMILIN3Q9NT22 766 aa13.86□□□□□ -0.19
SMARCE1-203ENST00000377808 SRRDQ9UH36 339 aa13.86□□□□□ -0.19
SMARCE1-203ENST00000377808 MYH8P13535 1937 aa13.85□□□□□ -0.19
SMARCE1-203ENST00000377808 GSG1L2A8MUP6 293 aa13.85□□□□□ -0.19
SMARCE1-203ENST00000377808 GUCY1A2P33402 732 aa13.85□□□□□ -0.19
SMARCE1-203ENST00000377808 PRMT2P55345 433 aa13.85□□□□□ -0.19
SMARCE1-203ENST00000377808 FAM110CQ1W6H9 321 aa13.85□□□□□ -0.19
SMARCE1-203ENST00000377808 C16orf86Q6ZW13 317 aa13.85□□□□□ -0.19
SMARCE1-203ENST00000377808 CHD1LQ86WJ1 897 aa13.85□□□□□ -0.19
SMARCE1-203ENST00000377808 CLEC10AQ8IUN9 316 aa13.85□□□□□ -0.19
SMARCE1-203ENST00000377808 SMC5Q8IY18 1101 aa13.85□□□□□ -0.19
SMARCE1-203ENST00000377808 RILPL2Q969X0 211 aa13.85□□□□□ -0.19
SMARCE1-203ENST00000377808 EVI5LQ96CN4 794 aa13.85□□□□□ -0.19
SMARCE1-203ENST00000377808 P2RX7Q99572 595 aaKnown RBP13.85□□□□□ -0.19
SMARCE1-203ENST00000377808 PAGR1Q9BTK6 254 aa13.85□□□□□ -0.19
SMARCE1-203ENST00000377808 NACAP1Q9BZK3 213 aa13.85□□□□□ -0.19
SMARCE1-203ENST00000377808 MKNK2Q9HBH9 465 aa13.85□□□□□ -0.19
SMARCE1-203ENST00000377808 BIN2Q9UBW5 565 aaPredicted RBP13.85□□□□□ -0.19
SMARCE1-203ENST00000377808 RAD21O60216 631 aa13.84□□□□□ -0.19
SMARCE1-203ENST00000377808 VCAM1P19320 739 aa13.84□□□□□ -0.19
SMARCE1-203ENST00000377808 HOXA7P31268 230 aaPredicted RBP13.84□□□□□ -0.19
SMARCE1-203ENST00000377808 HERVK_113P62684 666 aa13.84□□□□□ -0.19
SMARCE1-203ENST00000377808 ICA1Q05084 483 aa13.84□□□□□ -0.19
SMARCE1-203ENST00000377808 ZMYM1Q5SVZ6 1142 aa13.84□□□□□ -0.19
SMARCE1-203ENST00000377808 CCDC129Q6ZRS4 1044 aa13.84□□□□□ -0.19
SMARCE1-203ENST00000377808 CCAR1Q8IX12 1150 aaKnown RBP13.84□□□□□ -0.19
SMARCE1-203ENST00000377808 COA7Q96BR5 231 aa13.84□□□□□ -0.19
SMARCE1-203ENST00000377808 ARMC5Q96C12 935 aa13.84□□□□□ -0.19
SMARCE1-203ENST00000377808 TMEM106CQ9BVX2 250 aa13.84□□□□□ -0.19
SMARCE1-203ENST00000377808 KIAA1683Q9H0B3 1180 aa13.84□□□□□ -0.19
SMARCE1-203ENST00000377808 ARHGEF10LQ9HCE6 1279 aa13.84□□□□□ -0.19
SMARCE1-203ENST00000377808 CWC22Q9HCG8 908 aaKnown RBP13.84□□□□□ -0.19
SMARCE1-203ENST00000377808 STAP2Q9UGK3 403 aa13.84□□□□□ -0.19
SMARCE1-203ENST00000377808 USP17L15C9J2P7 530 aa13.83□□□□□ -0.2
SMARCE1-203ENST00000377808 USP17L13C9JLJ4 530 aa13.83□□□□□ -0.2
SMARCE1-203ENST00000377808 USP17L11C9JVI0 530 aa13.83□□□□□ -0.2
SMARCE1-203ENST00000377808 USP17L18D6R9N7 530 aa13.83□□□□□ -0.2
SMARCE1-203ENST00000377808 USP17L22D6RA61 530 aa13.83□□□□□ -0.2
SMARCE1-203ENST00000377808 USP17L17D6RBQ6 530 aa13.83□□□□□ -0.2
SMARCE1-203ENST00000377808 USP17L19D6RCP7 530 aa13.83□□□□□ -0.2
SMARCE1-203ENST00000377808 USP17L20D6RJB6 530 aa13.83□□□□□ -0.2
SMARCE1-203ENST00000377808 PEX10O60683 326 aa13.83□□□□□ -0.2
SMARCE1-203ENST00000377808 RGS19P49795 217 aa13.83□□□□□ -0.2
SMARCE1-203ENST00000377808 NUCB1Q02818 461 aa13.83□□□□□ -0.2
SMARCE1-203ENST00000377808 USP17L24Q0WX57 530 aa13.83□□□□□ -0.2
SMARCE1-203ENST00000377808 GIMAP6Q6P9H5 292 aa13.83□□□□□ -0.2
SMARCE1-203ENST00000377808 SAMD1Q6SPF0 538 aaPredicted RBP13.83□□□□□ -0.2
SMARCE1-203ENST00000377808 ZNF333Q96JL9 665 aa13.83□□□□□ -0.2
SMARCE1-203ENST00000377808 CCDC17Q96LX7 622 aa13.83□□□□□ -0.2
SMARCE1-203ENST00000377808 NAPBQ9H115 298 aa13.83□□□□□ -0.2
SMARCE1-203ENST00000377808 RPAP3Q9H6T3 665 aaPredicted RBP13.83□□□□□ -0.2
SMARCE1-203ENST00000377808 EPB41L4AQ9HCS5 686 aaPredicted RBP13.83□□□□□ -0.2
SMARCE1-203ENST00000377808 GABRQQ9UN88 632 aa13.83□□□□□ -0.2
SMARCE1-203ENST00000377808 MGAMO43451 1857 aa13.82□□□□□ -0.2
SMARCE1-203ENST00000377808 PATL2C9JE40 543 aaKnown RBP13.82□□□□□ -0.2
SMARCE1-203ENST00000377808 GRK4P32298 578 aa13.82□□□□□ -0.2
SMARCE1-203ENST00000377808 FLT3LGP49771 235 aa13.82□□□□□ -0.2
SMARCE1-203ENST00000377808 SBK1Q52WX2 424 aa13.82□□□□□ -0.2
SMARCE1-203ENST00000377808 IFNL3Q8IZI9 196 aa13.82□□□□□ -0.2
SMARCE1-203ENST00000377808 GPRC5AQ8NFJ5 357 aa13.82□□□□□ -0.2
SMARCE1-203ENST00000377808 C12orf42Q96LP6 360 aa13.82□□□□□ -0.2
SMARCE1-203ENST00000377808 TANGO6Q9C0B7 1094 aa13.82□□□□□ -0.2
SMARCE1-203ENST00000377808 SH2D4AQ9H788 454 aa13.82□□□□□ -0.2
SMARCE1-203ENST00000377808 HTTP42858 3142 aa13.82□□□□□ -0.2
SMARCE1-203ENST00000377808 CENPFP49454 3210 aa13.81□□□□□ -0.2
SMARCE1-203ENST00000377808 A0A1W2PRG0 241 aa13.81□□□□□ -0.2
SMARCE1-203ENST00000377808 POTEFA5A3E0 1075 aa13.81□□□□□ -0.2
SMARCE1-203ENST00000377808 PRDM1O75626 825 aa13.81□□□□□ -0.2
SMARCE1-203ENST00000377808 WDR78Q5VTH9 848 aa13.81□□□□□ -0.2
SMARCE1-203ENST00000377808 SPICE1Q8N0Z3 855 aa13.81□□□□□ -0.2
SMARCE1-203ENST00000377808 GTF3C2Q8WUA4 911 aaPredicted RBP13.81□□□□□ -0.2
SMARCE1-203ENST00000377808 TXNRD2Q9NNW7 524 aa13.81□□□□□ -0.2
SMARCE1-203ENST00000377808 ADCY3O60266 1144 aa13.8□□□□□ -0.2
SMARCE1-203ENST00000377808 SLC3A2P08195 630 aaKnown RBP13.8□□□□□ -0.2
SMARCE1-203ENST00000377808 EEF2P13639 858 aaKnown RBP13.8□□□□□ -0.2
SMARCE1-203ENST00000377808 ERVK-9P63128 1117 aa13.8□□□□□ -0.2
SMARCE1-203ENST00000377808 ERVK-24P63145 666 aa13.8□□□□□ -0.2
SMARCE1-203ENST00000377808 UBXN2AP68543 259 aa13.8□□□□□ -0.2
SMARCE1-203ENST00000377808 CATSPERGQ6ZRH7 1159 aa13.8□□□□□ -0.2
SMARCE1-203ENST00000377808 PLEKHM2Q8IWE5 1019 aa13.8□□□□□ -0.2
SMARCE1-203ENST00000377808 ZNF444Q8N0Y2 327 aaPredicted RBP13.8□□□□□ -0.2
SMARCE1-203ENST00000377808 SLAIN1Q8ND83 568 aa13.8□□□□□ -0.2
SMARCE1-203ENST00000377808 FAM227BQ96M60 508 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms