RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 Q6ZUG5 572 aa25.07■■□□□ 1.6
CBWD3-202ENST00000377342 CCDC84Q86UT8 332 aaPredicted RBP25.07■■□□□ 1.6
CBWD3-202ENST00000377342 TMEM87BQ96K49 555 aa25.07■■□□□ 1.6
CBWD3-202ENST00000377342 MTA3Q9BTC8 594 aa25.07■■□□□ 1.6
CBWD3-202ENST00000377342 LY9Q9HBG7 655 aa25.07■■□□□ 1.6
CBWD3-202ENST00000377342 GBA2Q9HCG7 927 aaPredicted RBP25.07■■□□□ 1.6
CBWD3-202ENST00000377342 MTMR4Q9NYA4 1195 aa25.07■■□□□ 1.6
CBWD3-202ENST00000377342 SNCAIPQ9Y6H5 919 aa25.07■■□□□ 1.6
CBWD3-202ENST00000377342 IFIT3O14879 490 aaKnown RBP25.06■■□□□ 1.6
CBWD3-202ENST00000377342 CD2BP2O95400 341 aaKnown RBP25.06■■□□□ 1.6
CBWD3-202ENST00000377342 ASNSP08243 561 aa25.06■■□□□ 1.6
CBWD3-202ENST00000377342 TTLL12Q14166 644 aaPredicted RBP25.06■■□□□ 1.6
CBWD3-202ENST00000377342 FBXL16Q8N461 479 aa25.06■■□□□ 1.6
CBWD3-202ENST00000377342 MAP3K9P80192 1104 aa25.05■■□□□ 1.6
CBWD3-202ENST00000377342 RAB3GAP1Q15042 981 aa25.05■■□□□ 1.6
CBWD3-202ENST00000377342 TMEM67Q5HYA8 995 aa25.05■■□□□ 1.6
CBWD3-202ENST00000377342 LDLRAD1Q5T700 205 aa25.05■■□□□ 1.6
CBWD3-202ENST00000377342 ARMC9Q7Z3E5 817 aa25.05■■□□□ 1.6
CBWD3-202ENST00000377342 SIAH1Q8IUQ4 282 aa25.05■■□□□ 1.6
CBWD3-202ENST00000377342 CABP5Q9NP86 173 aa25.05■■□□□ 1.6
CBWD3-202ENST00000377342 AK2P54819 239 aa25.04■■□□□ 1.6
CBWD3-202ENST00000377342 FKBP1BP68106 108 aa25.04■■□□□ 1.6
CBWD3-202ENST00000377342 CLMNQ96JQ2 1002 aa25.04■■□□□ 1.6
CBWD3-202ENST00000377342 ALDH8A1Q9H2A2 487 aaPredicted RBP25.04■■□□□ 1.6
CBWD3-202ENST00000377342 GINM1Q9NU53 330 aa25.04■■□□□ 1.6
CBWD3-202ENST00000377342 UBE2Q2LH0YL09 131 aa25.04■■□□□ 1.6
CBWD3-202ENST00000377342 ICA1Q05084 483 aa25.04■■□□□ 1.6
CBWD3-202ENST00000377342 SART3Q15020 963 aaKnown RBP25.04■■□□□ 1.6
CBWD3-202ENST00000377342 ANKRD13AQ8IZ07 590 aa25.04■■□□□ 1.6
CBWD3-202ENST00000377342 KANSL2Q9H9L4 492 aa25.04■■□□□ 1.6
CBWD3-202ENST00000377342 FSTL1Q12841 308 aa25.03■■□□□ 1.6
CBWD3-202ENST00000377342 ANKS1AQ92625 1134 aa25.03■■□□□ 1.6
CBWD3-202ENST00000377342 BRF1Q92994 677 aa25.03■■□□□ 1.6
CBWD3-202ENST00000377342 PTPRAP18433 802 aa25.02■■□□□ 1.6
CBWD3-202ENST00000377342 LIFRP42702 1097 aa25.02■■□□□ 1.6
CBWD3-202ENST00000377342 WTAPQ15007 396 aa25.02■■□□□ 1.6
CBWD3-202ENST00000377342 DGKHQ86XP1 1220 aa25.02■■□□□ 1.6
CBWD3-202ENST00000377342 STX8Q9UNK0 236 aa25.02■■□□□ 1.6
CBWD3-202ENST00000377342 EEF2P13639 858 aaKnown RBP25.01■■□□□ 1.59
CBWD3-202ENST00000377342 SGMS1Q86VZ5 419 aa25.01■■□□□ 1.59
CBWD3-202ENST00000377342 CSADQ9Y600 493 aa25.01■■□□□ 1.59
CBWD3-202ENST00000377342 A0A1W2PRG0 241 aa25.01■■□□□ 1.59
CBWD3-202ENST00000377342 ERICH2A1L162 156 aa25.01■■□□□ 1.59
CBWD3-202ENST00000377342 TTLL1O95922 423 aa25.01■■□□□ 1.59
CBWD3-202ENST00000377342 CCDC178Q5BJE1 867 aa25.01■■□□□ 1.59
CBWD3-202ENST00000377342 IFIT1BQ5T764 474 aaKnown RBP25.01■■□□□ 1.59
CBWD3-202ENST00000377342 ACER1Q8TDN7 264 aa25.01■■□□□ 1.59
CBWD3-202ENST00000377342 TMEM47Q9BQJ4 181 aa25.01■■□□□ 1.59
CBWD3-202ENST00000377342 LARP6Q9BRS8 491 aaKnown RBP25.01■■□□□ 1.59
CBWD3-202ENST00000377342 PICK1Q9NRD5 415 aa25.01■■□□□ 1.59
CBWD3-202ENST00000377342 NYAP2Q9P242 653 aa25.01■■□□□ 1.59
CBWD3-202ENST00000377342 BRPF3Q9ULD4 1205 aa25.01■■□□□ 1.59
CBWD3-202ENST00000377342 APOBRQ0VD83 1088 aa25■■□□□ 1.59
CBWD3-202ENST00000377342 LRRC47Q8N1G4 583 aaKnown RBP25■■□□□ 1.59
CBWD3-202ENST00000377342 C2orf69Q8N8R5 385 aa25■■□□□ 1.59
CBWD3-202ENST00000377342 CNKSR2Q8WXI2 1034 aa25■■□□□ 1.59
CBWD3-202ENST00000377342 ELP3Q9H9T3 547 aa25■■□□□ 1.59
CBWD3-202ENST00000377342 ST18O60284 1047 aa24.99■■□□□ 1.59
CBWD3-202ENST00000377342 ECE1P42892 770 aa24.99■■□□□ 1.59
CBWD3-202ENST00000377342 FGD1P98174 961 aa24.99■■□□□ 1.59
CBWD3-202ENST00000377342 CLIP2Q9UDT6 1046 aa24.99■■□□□ 1.59
CBWD3-202ENST00000377342 LOC285556D6RIA3 1793 aa24.99■■□□□ 1.59
CBWD3-202ENST00000377342 USP17L5A8MUK1 530 aa24.98■■□□□ 1.59
CBWD3-202ENST00000377342 EVCP57679 992 aa24.98■■□□□ 1.59
CBWD3-202ENST00000377342 NOL8Q76FK4 1167 aaKnown RBP24.98■■□□□ 1.59
CBWD3-202ENST00000377342 SPDYE5A6NIY4 337 aa24.97■■□□□ 1.59
CBWD3-202ENST00000377342 UNCXA6NJT0 531 aa24.97■■□□□ 1.59
CBWD3-202ENST00000377342 TOP1P11387 765 aaKnown RBP24.97■■□□□ 1.59
CBWD3-202ENST00000377342 ATP2B2Q01814 1243 aa24.97■■□□□ 1.59
CBWD3-202ENST00000377342 RASGRP2Q7LDG7 609 aa24.97■■□□□ 1.59
CBWD3-202ENST00000377342 IL27Q8NEV9 243 aa24.97■■□□□ 1.59
CBWD3-202ENST00000377342 MKL1Q969V6 931 aa24.97■■□□□ 1.59
CBWD3-202ENST00000377342 TPCN1Q9ULQ1 816 aa24.97■■□□□ 1.59
CBWD3-202ENST00000377342 LARGE1O95461 756 aa24.97■■□□□ 1.59
CBWD3-202ENST00000377342 PPP4R3BQ5MIZ7 849 aa24.97■■□□□ 1.59
CBWD3-202ENST00000377342 APOA5Q6Q788 366 aa24.97■■□□□ 1.59
CBWD3-202ENST00000377342 WDR18Q9BV38 432 aa24.97■■□□□ 1.59
CBWD3-202ENST00000377342 KLF18A0A0U1RQI7 1052 aa24.96■■□□□ 1.59
CBWD3-202ENST00000377342 ANKRD1Q15327 319 aa24.96■■□□□ 1.59
CBWD3-202ENST00000377342 SAPCD2Q86UD0 394 aa24.96■■□□□ 1.59
CBWD3-202ENST00000377342 ZNF654Q8IZM8 581 aa24.96■■□□□ 1.59
CBWD3-202ENST00000377342 PNMA1Q8ND90 353 aa24.96■■□□□ 1.59
CBWD3-202ENST00000377342 MYL10Q9BUA6 226 aa24.96■■□□□ 1.59
CBWD3-202ENST00000377342 KAT14Q9H8E8 782 aa24.96■■□□□ 1.59
CBWD3-202ENST00000377342 ARHGEF10LQ9HCE6 1279 aa24.96■■□□□ 1.59
CBWD3-202ENST00000377342 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.96■■□□□ 1.59
CBWD3-202ENST00000377342 TMX2Q9Y320 296 aa24.96■■□□□ 1.59
CBWD3-202ENST00000377342 ZHX2Q9Y6X8 837 aa24.96■■□□□ 1.59
CBWD3-202ENST00000377342 HUNKP57058 714 aa24.95■■□□□ 1.58
CBWD3-202ENST00000377342 NFXL1Q6ZNB6 911 aa24.95■■□□□ 1.58
CBWD3-202ENST00000377342 ERO1BQ86YB8 467 aa24.95■■□□□ 1.58
CBWD3-202ENST00000377342 AFG3L2Q9Y4W6 797 aa24.95■■□□□ 1.58
CBWD3-202ENST00000377342 CCDC69A6NI79 296 aa24.94■■□□□ 1.58
CBWD3-202ENST00000377342 GJA5P36382 358 aa24.94■■□□□ 1.58
CBWD3-202ENST00000377342 TROAPQ12815 778 aa24.94■■□□□ 1.58
CBWD3-202ENST00000377342 RAB11FIP4Q86YS3 637 aa24.94■■□□□ 1.58
CBWD3-202ENST00000377342 TMTC2Q8N394 836 aa24.94■■□□□ 1.58
CBWD3-202ENST00000377342 ZNF280CQ8ND82 737 aa24.94■■□□□ 1.58
CBWD3-202ENST00000377342 OTUD5Q96G74 571 aa24.94■■□□□ 1.58
CBWD3-202ENST00000377342 HPS5Q9UPZ3 1129 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms