RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 F13A1P00488 732 aa9.62□□□□□ -0.87
CRNKL1-202ENST00000377340 RRAGBQ5VZM2 374 aa9.62□□□□□ -0.87
CRNKL1-202ENST00000377340 ZNHIT6Q9NWK9 470 aaKnown RBP9.62□□□□□ -0.87
CRNKL1-202ENST00000377340 HACL1Q9UJ83 578 aa9.62□□□□□ -0.87
CRNKL1-202ENST00000377340 ME3Q16798 604 aa9.62□□□□□ -0.87
CRNKL1-202ENST00000377340 CCDC84Q86UT8 332 aaPredicted RBP9.62□□□□□ -0.87
CRNKL1-202ENST00000377340 SMARCE1Q969G3 411 aa9.62□□□□□ -0.87
CRNKL1-202ENST00000377340 POLRMTO00411 1230 aaKnown RBP9.62□□□□□ -0.87
CRNKL1-202ENST00000377340 ARHGEF16Q5VV41 709 aa9.62□□□□□ -0.87
CRNKL1-202ENST00000377340 ZFP91Q96JP5 570 aaPredicted RBP9.62□□□□□ -0.87
CRNKL1-202ENST00000377340 TSG101Q99816 390 aa9.62□□□□□ -0.87
CRNKL1-202ENST00000377340 ITSN1Q15811 1721 aa9.62□□□□□ -0.87
CRNKL1-202ENST00000377340 KIAA1210Q9ULL0 1709 aa9.62□□□□□ -0.87
CRNKL1-202ENST00000377340 FMNL1O95466 1100 aaPredicted RBP9.62□□□□□ -0.87
CRNKL1-202ENST00000377340 BMP3P12645 472 aa9.62□□□□□ -0.87
CRNKL1-202ENST00000377340 NONOQ15233 471 aaKnown RBP eCLIP9.62□□□□□ -0.87
CRNKL1-202ENST00000377340 CCDC40Q4G0X9 1142 aa9.62□□□□□ -0.87
CRNKL1-202ENST00000377340 NCAPH2Q6IBW4 605 aa9.62□□□□□ -0.87
CRNKL1-202ENST00000377340 RTEL1Q9NZ71 1219 aa9.62□□□□□ -0.87
CRNKL1-202ENST00000377340 SWAP70Q9UH65 585 aa9.62□□□□□ -0.87
CRNKL1-202ENST00000377340 BMP15O95972 392 aa9.61□□□□□ -0.87
CRNKL1-202ENST00000377340 KCNG4Q8TDN1 519 aa9.61□□□□□ -0.87
CRNKL1-202ENST00000377340 CPLX3Q8WVH0 158 aa9.61□□□□□ -0.87
CRNKL1-202ENST00000377340 PLA2G12BQ9BX93 195 aa9.61□□□□□ -0.87
CRNKL1-202ENST00000377340 MLXIPQ9HAP2 919 aa9.61□□□□□ -0.87
CRNKL1-202ENST00000377340 DCP1AQ9NPI6 582 aaPredicted RBP9.61□□□□□ -0.87
CRNKL1-202ENST00000377340 NMT2O60551 498 aa9.61□□□□□ -0.87
CRNKL1-202ENST00000377340 OSBPL3Q9H4L5 887 aa9.61□□□□□ -0.87
CRNKL1-202ENST00000377340 ARHGEF28Q8N1W1 1705 aaKnown RBP9.61□□□□□ -0.87
CRNKL1-202ENST00000377340 MTIF2P46199 727 aaKnown RBP9.61□□□□□ -0.87
CRNKL1-202ENST00000377340 TGFB2P61812 414 aa9.61□□□□□ -0.87
CRNKL1-202ENST00000377340 GIMAP6Q6P9H5 292 aa9.61□□□□□ -0.87
CRNKL1-202ENST00000377340 FAM177A1Q8N128 213 aaPredicted RBP9.61□□□□□ -0.87
CRNKL1-202ENST00000377340 KRI1Q8N9T8 703 aaKnown RBP9.61□□□□□ -0.87
CRNKL1-202ENST00000377340 LSG1Q9H089 658 aaKnown RBP9.61□□□□□ -0.87
CRNKL1-202ENST00000377340 SPC25Q9HBM1 224 aa9.61□□□□□ -0.87
CRNKL1-202ENST00000377340 EXOC1Q9NV70 894 aa9.61□□□□□ -0.87
CRNKL1-202ENST00000377340 DACT1Q9NYF0 836 aa9.61□□□□□ -0.87
CRNKL1-202ENST00000377340 DAGLAQ9Y4D2 1042 aa9.61□□□□□ -0.87
CRNKL1-202ENST00000377340 CCT6AP40227 531 aaKnown RBP9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 PRR16Q569H4 304 aa9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 RSBN1LQ6PCB5 846 aaPredicted RBP9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 NLRX1Q86UT6 975 aa9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 COA7Q96BR5 231 aa9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 NUP88Q99567 741 aaPredicted RBP9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 AZI2Q9H6S1 392 aa9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 SLC5A4Q9NY91 659 aa9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 TPCN1Q9ULQ1 816 aa9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 MROH7-TTC4A0A0A0MT08 1334 aa9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 CCNA1P78396 465 aa9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 CXCL9Q07325 125 aa9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 PDGFDQ9GZP0 370 aaPredicted RBP9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 ELP3Q9H9T3 547 aa9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 DISP2A7MBM2 1401 aa9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 A0A1B0GVL5 298 aa9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 KIF20AO95235 890 aa9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 HUNKP57058 714 aa9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 INF2Q27J81 1249 aa9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 CLEC10AQ8IUN9 316 aa9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 RASGRP4Q8TDF6 673 aa9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 STAMQ92783 540 aa9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 LZTS2Q9BRK4 669 aa9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 TMEM39BQ9GZU3 492 aa9.6□□□□□ -0.87
CRNKL1-202ENST00000377340 CCDC169A6NNP5 214 aa9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 FAM13AO94988 1023 aa9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 SSR1P43307 286 aaKnown RBP9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 APOBEC3FQ8IUX4 373 aaKnown RBP9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 MRPS27Q92552 414 aaKnown RBP9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 PGBD1Q96JS3 809 aa9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 ANO10Q9NW15 660 aa9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 MRPL11Q9Y3B7 192 aaKnown RBP9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 WTIPA6NIX2 430 aaPredicted RBP9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 BTBD18B2RXH4 712 aa9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 OSBPP22059 807 aa9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 USP14P54578 494 aa9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 MAP1SQ66K74 1059 aaPredicted RBP9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 APOA5Q6Q788 366 aa9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 STXBP4Q6ZWJ1 553 aa9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 NSUN4Q96CB9 384 aaKnown RBP9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 AMNQ9BXJ7 453 aa9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 DEFB129Q9H1M3 183 aa9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 PUF60Q9UHX1 559 aaKnown RBP9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 PLEKHG2Q9H7P9 1386 aa9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 GCOM1H8Y6P7 765 aaPredicted RBP9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 POLR2MP0CAP2 368 aa9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 ZNF157P51786 506 aaPredicted RBP9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 STAT2P52630 851 aa9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 NCBP1Q09161 790 aaKnown RBP9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 RILPL1Q5EBL4 403 aa9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 TTC38Q5R3I4 469 aa9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 CACNA2D4Q7Z3S7 1137 aa9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 KAZALD1Q96I82 304 aa9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 TRIM47Q96LD4 638 aa9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 PIGSQ96S52 555 aa9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 ZHX1Q9UKY1 873 aaPredicted RBP9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 HMGCS2P54868 508 aa9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 GPATCH4Q5T3I0 446 aaKnown RBP9.59□□□□□ -0.87
CRNKL1-202ENST00000377340 TMEM179Q6ZVK1 233 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 MYOZ2Q9NPC6 264 aa9.58□□□□□ -0.88
CRNKL1-202ENST00000377340 PHACTR2O75167 634 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms