RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 TAF5LO75529 589 aa12.25□□□□□ -0.45
MDC1-201ENST00000376406 FAM173BQ6P4H8 233 aa12.25□□□□□ -0.45
MDC1-201ENST00000376406 VPS16Q9H269 839 aa12.25□□□□□ -0.45
MDC1-201ENST00000376406 LRRIQ1Q96JM4 1722 aa12.25□□□□□ -0.45
MDC1-201ENST00000376406 TBC1D8BQ0IIM8 1120 aa12.25□□□□□ -0.45
MDC1-201ENST00000376406 STRN3Q13033 797 aa12.25□□□□□ -0.45
MDC1-201ENST00000376406 DCAF17Q5H9S7 520 aaPredicted RBP12.25□□□□□ -0.45
MDC1-201ENST00000376406 LSG1Q9H089 658 aaKnown RBP12.25□□□□□ -0.45
MDC1-201ENST00000376406 RSPH14Q9UHP6 348 aa12.25□□□□□ -0.45
MDC1-201ENST00000376406 ABCA6Q8N139 1617 aa12.25□□□□□ -0.45
MDC1-201ENST00000376406 OTUD6AQ7L8S5 288 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 KIFAP3Q92845 792 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 TRIM6Q9C030 488 aaPredicted RBP12.24□□□□□ -0.45
MDC1-201ENST00000376406 TPCN1Q9ULQ1 816 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 METP08581 1390 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 ARHGAP6O43182 974 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 RBM6P78332 1123 aaKnown RBP12.24□□□□□ -0.45
MDC1-201ENST00000376406 GSTA5Q7RTV2 222 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 TMTC1Q8IUR5 882 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 ALKQ9UM73 1620 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 MAP2P11137 1827 aaKnown RBP12.24□□□□□ -0.45
MDC1-201ENST00000376406 CCDC17Q96LX7 622 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 TTC14Q96N46 770 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 TRERF1Q96PN7 1200 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 NAP1L3Q99457 506 aaPredicted RBP12.24□□□□□ -0.45
MDC1-201ENST00000376406 GPCPD1Q9NPB8 672 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 TRAF5O00463 557 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 ATP2A1O14983 1001 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 AKNAD1Q5T1N1 836 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 ARMC9Q7Z3E5 817 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 NLRX1Q86UT6 975 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 CSGALNACT2Q8N6G5 542 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 IQCDQ96DY2 449 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 PPP1R9BQ96SB3 815 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 PLEKHG2Q9H7P9 1386 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 PPEF1O14829 653 aaPredicted RBP12.24□□□□□ -0.45
MDC1-201ENST00000376406 PPARAQ07869 468 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 GPT2Q8TD30 523 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.24□□□□□ -0.45
MDC1-201ENST00000376406 CLEC4GQ6UXB4 293 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 CCDC26Q8TAB7 109 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 FAM76AQ8TAV0 307 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 JAKMIP2Q96AA8 810 aa12.24□□□□□ -0.45
MDC1-201ENST00000376406 AGLP35573 1532 aa12.23□□□□□ -0.45
MDC1-201ENST00000376406 TRIM37O94972 964 aa12.23□□□□□ -0.45
MDC1-201ENST00000376406 C6orf163Q5TEZ5 329 aa12.23□□□□□ -0.45
MDC1-201ENST00000376406 IGSF1Q8N6C5 1336 aa12.23□□□□□ -0.45
MDC1-201ENST00000376406 IFT81Q8WYA0 676 aa12.23□□□□□ -0.45
MDC1-201ENST00000376406 CPSF1Q10570 1443 aaKnown RBP12.23□□□□□ -0.45
MDC1-201ENST00000376406 JCADQ9P266 1359 aa12.23□□□□□ -0.45
MDC1-201ENST00000376406 NPR1P16066 1061 aa12.23□□□□□ -0.45
MDC1-201ENST00000376406 ADCY7P51828 1080 aa12.23□□□□□ -0.45
MDC1-201ENST00000376406 CCDC93Q567U6 631 aa12.23□□□□□ -0.45
MDC1-201ENST00000376406 GALNT17Q6IS24 598 aa12.23□□□□□ -0.45
MDC1-201ENST00000376406 TICAM2Q86XR7 235 aa12.23□□□□□ -0.45
MDC1-201ENST00000376406 CCDC50Q8IVM0 306 aa12.23□□□□□ -0.45
MDC1-201ENST00000376406 NELFBQ8WX92 580 aa12.23□□□□□ -0.45
MDC1-201ENST00000376406 RTEL1Q9NZ71 1219 aa12.23□□□□□ -0.45
MDC1-201ENST00000376406 MTRF1LQ9UGC7 380 aaKnown RBP12.23□□□□□ -0.45
MDC1-201ENST00000376406 PALD1Q9ULE6 856 aa12.23□□□□□ -0.45
MDC1-201ENST00000376406 SPATA31A6Q5VVP1 1343 aa12.23□□□□□ -0.45
MDC1-201ENST00000376406 GAS8O95995 478 aa12.23□□□□□ -0.45
MDC1-201ENST00000376406 H0YCG3 227 aa12.23□□□□□ -0.45
MDC1-201ENST00000376406 CIAO1O76071 339 aa12.23□□□□□ -0.45
MDC1-201ENST00000376406 ABCD1P33897 745 aa12.23□□□□□ -0.45
MDC1-201ENST00000376406 CRKLP46109 303 aaKnown RBP12.23□□□□□ -0.45
MDC1-201ENST00000376406 ASIC2Q16515 512 aa12.23□□□□□ -0.45
MDC1-201ENST00000376406 WDR44Q5JSH3 913 aa12.23□□□□□ -0.45
MDC1-201ENST00000376406 KRT26Q7Z3Y9 468 aa12.23□□□□□ -0.45
MDC1-201ENST00000376406 NR1I2O75469 434 aa12.22□□□□□ -0.45
MDC1-201ENST00000376406 CCDC14Q49A88 953 aa12.22□□□□□ -0.45
MDC1-201ENST00000376406 DALRD3Q5D0E6 543 aaKnown RBP12.22□□□□□ -0.45
MDC1-201ENST00000376406 SEL1L2Q5TEA6 688 aa12.22□□□□□ -0.45
MDC1-201ENST00000376406 MTUS1Q9ULD2 1270 aa12.22□□□□□ -0.45
MDC1-201ENST00000376406 MTMR6Q9Y217 621 aa12.22□□□□□ -0.45
MDC1-201ENST00000376406 COMMD10Q9Y6G5 202 aa12.22□□□□□ -0.45
MDC1-201ENST00000376406 SPATA31A3Q5VYP0 1347 aa12.22□□□□□ -0.45
MDC1-201ENST00000376406 PNOCQ13519 176 aa12.22□□□□□ -0.45
MDC1-201ENST00000376406 RAPGEF1Q13905 1077 aa12.22□□□□□ -0.45
MDC1-201ENST00000376406 DDX17Q92841 729 aaKnown RBP12.22□□□□□ -0.45
MDC1-201ENST00000376406 FNBP1Q96RU3 617 aa12.22□□□□□ -0.45
MDC1-201ENST00000376406 MYL10Q9BUA6 226 aa12.22□□□□□ -0.45
MDC1-201ENST00000376406 ATG3Q9NT62 314 aa12.22□□□□□ -0.45
MDC1-201ENST00000376406 KCNQ3O43525 872 aa12.22□□□□□ -0.45
MDC1-201ENST00000376406 CALCRLQ16602 461 aa12.22□□□□□ -0.45
MDC1-201ENST00000376406 SMAP1Q8IYB5 467 aaPredicted RBP12.22□□□□□ -0.45
MDC1-201ENST00000376406 MRPL11Q9Y3B7 192 aaKnown RBP12.22□□□□□ -0.45
MDC1-201ENST00000376406 HSPD1P10809 573 aaKnown RBP12.22□□□□□ -0.45
MDC1-201ENST00000376406 NONOQ15233 471 aaKnown RBP eCLIP12.22□□□□□ -0.45
MDC1-201ENST00000376406 FCHSD1Q86WN1 690 aa12.22□□□□□ -0.45
MDC1-201ENST00000376406 EXOC8Q8IYI6 725 aa12.22□□□□□ -0.45
MDC1-201ENST00000376406 EAF2Q96CJ1 260 aaPredicted RBP12.22□□□□□ -0.45
MDC1-201ENST00000376406 TNS3Q68CZ2 1445 aa12.22□□□□□ -0.45
MDC1-201ENST00000376406 CEP128Q6ZU80 1094 aa12.22□□□□□ -0.45
MDC1-201ENST00000376406 KIAA1468Q9P260 1216 aa12.22□□□□□ -0.45
MDC1-201ENST00000376406 TULP4Q9NRJ4 1543 aa12.22□□□□□ -0.45
MDC1-201ENST00000376406 EEF2P13639 858 aaKnown RBP12.22□□□□□ -0.45
MDC1-201ENST00000376406 RGS22Q8NE09 1264 aa12.22□□□□□ -0.45
MDC1-201ENST00000376406 USP40Q9NVE5 1235 aa12.22□□□□□ -0.45
MDC1-201ENST00000376406 KDM3AQ9Y4C1 1321 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms