RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.39■□□□□ 0.53
RPF1-202ENST00000370656 FLT1P17948 1338 aa18.39■□□□□ 0.53
RPF1-202ENST00000370656 FRMPD3Q5JV73 1810 aa18.39■□□□□ 0.53
RPF1-202ENST00000370656 GDF11O95390 407 aa18.38■□□□□ 0.53
RPF1-202ENST00000370656 MYCNP04198 464 aaPredicted RBP18.38■□□□□ 0.53
RPF1-202ENST00000370656 CCDC158Q5M9N0 1113 aa18.38■□□□□ 0.53
RPF1-202ENST00000370656 TTC39AQ5SRH9 613 aa18.38■□□□□ 0.53
RPF1-202ENST00000370656 TMEM57Q8N5G2 664 aa18.38■□□□□ 0.53
RPF1-202ENST00000370656 USP6NLQ92738 828 aa18.38■□□□□ 0.53
RPF1-202ENST00000370656 CLUAP1Q96AJ1 413 aa18.38■□□□□ 0.53
RPF1-202ENST00000370656 MYH1P12882 1939 aa18.37■□□□□ 0.53
RPF1-202ENST00000370656 PEX10O60683 326 aa18.37■□□□□ 0.53
RPF1-202ENST00000370656 CCND3P30281 292 aaPredicted RBP18.37■□□□□ 0.53
RPF1-202ENST00000370656 Q3C1V9 767 aa18.37■□□□□ 0.53
RPF1-202ENST00000370656 MORN1Q5T089 497 aa18.37■□□□□ 0.53
RPF1-202ENST00000370656 MFSD14CQ5VZR4 134 aa18.37■□□□□ 0.53
RPF1-202ENST00000370656 LHX8Q68G74 356 aa18.37■□□□□ 0.53
RPF1-202ENST00000370656 PORCNQ9H237 461 aa18.37■□□□□ 0.53
RPF1-202ENST00000370656 CHMP4BQ9H444 224 aaKnown RBP18.37■□□□□ 0.53
RPF1-202ENST00000370656 DNAJC18Q9H819 358 aa18.37■□□□□ 0.53
RPF1-202ENST00000370656 PALD1Q9ULE6 856 aa18.37■□□□□ 0.53
RPF1-202ENST00000370656 MYO5AQ9Y4I1 1855 aaKnown RBP18.37■□□□□ 0.53
RPF1-202ENST00000370656 JAG1P78504 1218 aa18.36■□□□□ 0.53
RPF1-202ENST00000370656 MDM2Q00987 491 aaPredicted RBP18.36■□□□□ 0.53
RPF1-202ENST00000370656 CCL14Q16627 93 aa18.36■□□□□ 0.53
RPF1-202ENST00000370656 LRRC26Q2I0M4 334 aa18.36■□□□□ 0.53
RPF1-202ENST00000370656 EDC3Q96F86 508 aaKnown RBP18.36■□□□□ 0.53
RPF1-202ENST00000370656 FEZ1Q99689 392 aa18.36■□□□□ 0.53
RPF1-202ENST00000370656 LBHD1Q9BQE6 289 aaPredicted RBP18.36■□□□□ 0.53
RPF1-202ENST00000370656 SNRKQ9NRH2 765 aa18.36■□□□□ 0.53
RPF1-202ENST00000370656 ZBTB40Q9NUA8 1239 aa18.36■□□□□ 0.53
RPF1-202ENST00000370656 RABGAP1Q9Y3P9 1069 aa18.36■□□□□ 0.53
RPF1-202ENST00000370656 USP17L15C9J2P7 530 aa18.35■□□□□ 0.53
RPF1-202ENST00000370656 USP17L13C9JLJ4 530 aa18.35■□□□□ 0.53
RPF1-202ENST00000370656 USP17L11C9JVI0 530 aa18.35■□□□□ 0.53
RPF1-202ENST00000370656 USP17L18D6R9N7 530 aa18.35■□□□□ 0.53
RPF1-202ENST00000370656 USP17L22D6RA61 530 aa18.35■□□□□ 0.53
RPF1-202ENST00000370656 USP17L17D6RBQ6 530 aa18.35■□□□□ 0.53
RPF1-202ENST00000370656 USP17L19D6RCP7 530 aa18.35■□□□□ 0.53
RPF1-202ENST00000370656 USP17L20D6RJB6 530 aa18.35■□□□□ 0.53
RPF1-202ENST00000370656 MSCO60682 206 aa18.35■□□□□ 0.53
RPF1-202ENST00000370656 USP17L24Q0WX57 530 aa18.35■□□□□ 0.53
RPF1-202ENST00000370656 MAP2K5Q13163 448 aa18.35■□□□□ 0.53
RPF1-202ENST00000370656 CERS3Q8IU89 383 aa18.35■□□□□ 0.53
RPF1-202ENST00000370656 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.35■□□□□ 0.53
RPF1-202ENST00000370656 GPR108Q9NPR9 543 aa18.35■□□□□ 0.53
RPF1-202ENST00000370656 EMILIN3Q9NT22 766 aa18.35■□□□□ 0.53
RPF1-202ENST00000370656 USP14P54578 494 aa18.34■□□□□ 0.53
RPF1-202ENST00000370656 OS9Q13438 667 aaPredicted RBP18.34■□□□□ 0.53
RPF1-202ENST00000370656 WDR78Q5VTH9 848 aa18.34■□□□□ 0.53
RPF1-202ENST00000370656 PRKAG2Q9UGJ0 569 aa18.34■□□□□ 0.53
RPF1-202ENST00000370656 SAP30BPQ9UHR5 308 aaKnown RBP18.34■□□□□ 0.53
RPF1-202ENST00000370656 IVNS1ABPQ9Y6Y0 642 aa18.34■□□□□ 0.53
RPF1-202ENST00000370656 PNMA6EA0A0J9YXQ4 647 aa18.33■□□□□ 0.52
RPF1-202ENST00000370656 SLC15A5A6NIM6 579 aa18.33■□□□□ 0.52
RPF1-202ENST00000370656 GH2P01242 217 aa18.33■□□□□ 0.52
RPF1-202ENST00000370656 SHROOM1Q2M3G4 852 aaPredicted RBP18.33■□□□□ 0.52
RPF1-202ENST00000370656 TNNI3KQ59H18 835 aa18.33■□□□□ 0.52
RPF1-202ENST00000370656 FAM109BQ6ICB4 259 aaPredicted RBP18.33■□□□□ 0.52
RPF1-202ENST00000370656 ADGRA1Q86SQ6 560 aa18.33■□□□□ 0.52
RPF1-202ENST00000370656 C12orf42Q96LP6 360 aa18.33■□□□□ 0.52
RPF1-202ENST00000370656 SENP6Q9GZR1 1112 aaPredicted RBP18.33■□□□□ 0.52
RPF1-202ENST00000370656 FPGT-TNNI3KV9GXZ4 949 aa18.33■□□□□ 0.52
RPF1-202ENST00000370656 CYP2E1P05181 493 aaPredicted RBP18.32■□□□□ 0.52
RPF1-202ENST00000370656 CNGA1P29973 690 aa18.32■□□□□ 0.52
RPF1-202ENST00000370656 ATP2B2Q01814 1243 aa18.32■□□□□ 0.52
RPF1-202ENST00000370656 ZNF512BQ96KM6 892 aaPredicted RBP18.32■□□□□ 0.52
RPF1-202ENST00000370656 DDX20Q9UHI6 824 aaKnown RBP18.32■□□□□ 0.52
RPF1-202ENST00000370656 CYP7A1P22680 504 aa18.31■□□□□ 0.52
RPF1-202ENST00000370656 PTPREP23469 700 aa18.31■□□□□ 0.52
RPF1-202ENST00000370656 USP5P45974 858 aa18.31■□□□□ 0.52
RPF1-202ENST00000370656 ZYXQ15942 572 aaKnown RBP18.31■□□□□ 0.52
RPF1-202ENST00000370656 ITPRIPQ8IWB1 547 aa18.31■□□□□ 0.52
RPF1-202ENST00000370656 LPAR1Q92633 364 aa18.31■□□□□ 0.52
RPF1-202ENST00000370656 DBNDD2Q9BQY9 259 aa18.31■□□□□ 0.52
RPF1-202ENST00000370656 SERPINB13Q9UIV8 391 aa18.31■□□□□ 0.52
RPF1-202ENST00000370656 POTEB2H3BUK9 544 aa18.3■□□□□ 0.52
RPF1-202ENST00000370656 RAB3GAP1Q15042 981 aa18.3■□□□□ 0.52
RPF1-202ENST00000370656 TATDN1Q6P1N9 297 aa18.3■□□□□ 0.52
RPF1-202ENST00000370656 CATSPERGQ6ZRH7 1159 aa18.3■□□□□ 0.52
RPF1-202ENST00000370656 TTC6Q86TZ1 520 aa18.3■□□□□ 0.52
RPF1-202ENST00000370656 KIAA1683Q9H0B3 1180 aa18.3■□□□□ 0.52
RPF1-202ENST00000370656 CABP5Q9NP86 173 aa18.3■□□□□ 0.52
RPF1-202ENST00000370656 PCDHB15Q9Y5E8 787 aa18.3■□□□□ 0.52
RPF1-202ENST00000370656 NDUFB9Q9Y6M9 179 aa18.3■□□□□ 0.52
RPF1-202ENST00000370656 DNM1LO00429 736 aa18.29■□□□□ 0.52
RPF1-202ENST00000370656 HOXC6P09630 235 aa18.29■□□□□ 0.52
RPF1-202ENST00000370656 ZAP70P43403 619 aa18.29■□□□□ 0.52
RPF1-202ENST00000370656 DYNLL1P63167 89 aaKnown RBP18.29■□□□□ 0.52
RPF1-202ENST00000370656 CERKLQ49MI3 558 aaPredicted RBP18.29■□□□□ 0.52
RPF1-202ENST00000370656 POTEEQ6S8J3 1075 aa18.29■□□□□ 0.52
RPF1-202ENST00000370656 LBX2Q6XYB7 198 aa18.29■□□□□ 0.52
RPF1-202ENST00000370656 CENPQQ7L2Z9 268 aaPredicted RBP18.29■□□□□ 0.52
RPF1-202ENST00000370656 FAM161BQ96MY7 647 aa18.29■□□□□ 0.52
RPF1-202ENST00000370656 EHD4Q9H223 541 aa18.29■□□□□ 0.52
RPF1-202ENST00000370656 CNMDO75829 334 aa18.28■□□□□ 0.52
RPF1-202ENST00000370656 IDH1O75874 414 aaKnown RBP18.28■□□□□ 0.52
RPF1-202ENST00000370656 VCAM1P19320 739 aa18.28■□□□□ 0.52
RPF1-202ENST00000370656 ATN1P54259 1190 aaPredicted RBP18.28■□□□□ 0.52
RPF1-202ENST00000370656 GRB14Q14449 540 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 183.3 ms