RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 SLF1Q9BQI6 1058 aa12.38□□□□□ -0.43
LRIF1-201ENST00000369763 TRIM10Q9UDY6 481 aa12.38□□□□□ -0.43
LRIF1-201ENST00000369763 SRPRBQ9Y5M8 271 aaKnown RBP12.38□□□□□ -0.43
LRIF1-201ENST00000369763 MRFAP1Q9Y605 127 aa12.38□□□□□ -0.43
LRIF1-201ENST00000369763 PHRF1Q9P1Y6 1649 aaKnown RBP12.38□□□□□ -0.43
LRIF1-201ENST00000369763 VGLL3A8MV65 326 aa12.38□□□□□ -0.43
LRIF1-201ENST00000369763 ENC1O14682 589 aa12.38□□□□□ -0.43
LRIF1-201ENST00000369763 ZRANB2O95218 330 aaKnown RBP eCLIP12.38□□□□□ -0.43
LRIF1-201ENST00000369763 PLCD1P51178 756 aa12.38□□□□□ -0.43
LRIF1-201ENST00000369763 DHX8Q14562 1220 aaKnown RBP12.38□□□□□ -0.43
LRIF1-201ENST00000369763 FOXP1Q9H334 677 aaPredicted RBP12.38□□□□□ -0.43
LRIF1-201ENST00000369763 DACH1Q9UI36 760 aa12.38□□□□□ -0.43
LRIF1-201ENST00000369763 IGHMBP2P38935 993 aaKnown RBP12.37□□□□□ -0.43
LRIF1-201ENST00000369763 LMAN1P49257 510 aa12.37□□□□□ -0.43
LRIF1-201ENST00000369763 CHMP4BP1P59074 171 aa12.37□□□□□ -0.43
LRIF1-201ENST00000369763 MAP3K9P80192 1104 aa12.37□□□□□ -0.43
LRIF1-201ENST00000369763 CHRNDQ07001 517 aa12.37□□□□□ -0.43
LRIF1-201ENST00000369763 TBX2Q13207 712 aaPredicted RBP12.37□□□□□ -0.43
LRIF1-201ENST00000369763 NR1I3Q14994 352 aa12.37□□□□□ -0.43
LRIF1-201ENST00000369763 KIFC2Q96AC6 838 aa12.37□□□□□ -0.43
LRIF1-201ENST00000369763 TRPM3Q9HCF6 1732 aaPredicted RBP12.37□□□□□ -0.43
LRIF1-201ENST00000369763 WDR19Q8NEZ3 1342 aa12.37□□□□□ -0.43
LRIF1-201ENST00000369763 MAGEB6P1A0A0J9YX57 407 aa12.37□□□□□ -0.43
LRIF1-201ENST00000369763 KIF5CO60282 957 aa12.37□□□□□ -0.43
LRIF1-201ENST00000369763 NKX1-1Q15270 411 aaPredicted RBP12.37□□□□□ -0.43
LRIF1-201ENST00000369763 SLC35F6Q8N357 371 aa12.37□□□□□ -0.43
LRIF1-201ENST00000369763 KCPQ6ZWJ8 1503 aa12.37□□□□□ -0.43
LRIF1-201ENST00000369763 MYO5AQ9Y4I1 1855 aaKnown RBP12.37□□□□□ -0.43
LRIF1-201ENST00000369763 CCDC196A0A1B0GTZ2 297 aa12.36□□□□□ -0.43
LRIF1-201ENST00000369763 TRIM49BA6NDI0 452 aa12.36□□□□□ -0.43
LRIF1-201ENST00000369763 KRT2P35908 639 aa12.36□□□□□ -0.43
LRIF1-201ENST00000369763 CUL4BQ13620 913 aa12.36□□□□□ -0.43
LRIF1-201ENST00000369763 ESR2Q92731 530 aa12.36□□□□□ -0.43
LRIF1-201ENST00000369763 GPKOWQ92917 476 aaPredicted RBP eCLIP12.36□□□□□ -0.43
LRIF1-201ENST00000369763 GDAQ9Y2T3 454 aa12.36□□□□□ -0.43
LRIF1-201ENST00000369763 CCDC66A2RUB6 948 aa12.36□□□□□ -0.43
LRIF1-201ENST00000369763 PP2D1A8MPX8 630 aa12.36□□□□□ -0.43
LRIF1-201ENST00000369763 USP17L12C9JPN9 530 aa12.36□□□□□ -0.43
LRIF1-201ENST00000369763 USP17L21D6R901 530 aa12.36□□□□□ -0.43
LRIF1-201ENST00000369763 N4BP1O75113 896 aaKnown RBP12.36□□□□□ -0.43
LRIF1-201ENST00000369763 FGFR2P21802 821 aa12.36□□□□□ -0.43
LRIF1-201ENST00000369763 NLRP5P59047 1200 aa12.36□□□□□ -0.43
LRIF1-201ENST00000369763 GOLGA1Q92805 767 aa12.36□□□□□ -0.43
LRIF1-201ENST00000369763 SLAIN2Q9P270 581 aa12.36□□□□□ -0.43
LRIF1-201ENST00000369763 GUCA1BQ9UMX6 200 aa12.36□□□□□ -0.43
LRIF1-201ENST00000369763 CEP131Q9UPN4 1083 aa12.36□□□□□ -0.43
LRIF1-201ENST00000369763 ADGRG1Q9Y653 693 aa12.36□□□□□ -0.43
LRIF1-201ENST00000369763 CYP2D6P10635 497 aa12.36□□□□□ -0.43
LRIF1-201ENST00000369763 XBP1P17861 261 aa12.36□□□□□ -0.43
LRIF1-201ENST00000369763 GTF2E1P29083 439 aaPredicted RBP12.36□□□□□ -0.43
LRIF1-201ENST00000369763 SARSP49591 514 aaKnown RBP12.36□□□□□ -0.43
LRIF1-201ENST00000369763 CATIPQ7Z7H3 387 aa12.36□□□□□ -0.43
LRIF1-201ENST00000369763 STAG1Q8WVM7 1258 aa12.36□□□□□ -0.43
LRIF1-201ENST00000369763 AATFQ9NY61 560 aaKnown RBP eCLIP12.36□□□□□ -0.43
LRIF1-201ENST00000369763 TFCP2L1Q9NZI6 479 aa12.36□□□□□ -0.43
LRIF1-201ENST00000369763 ABCC12Q96J65 1359 aa12.36□□□□□ -0.43
LRIF1-201ENST00000369763 MYH15Q9Y2K3 1946 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 KCNJ6P48051 423 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 PKN1Q16512 942 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 LONRF2Q1L5Z9 754 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 NCAPH2Q6IBW4 605 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 SRRTQ9BXP5 876 aaKnown RBP12.35□□□□□ -0.43
LRIF1-201ENST00000369763 FAM53CQ9NYF3 392 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 ZMYND10O75800 440 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 ATP6V1AP38606 617 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 FILIP1LQ4L180 1135 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 MROH5Q6ZUA9 1318 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 CAPZA3Q96KX2 299 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 PDE11AQ9HCR9 933 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 ADAMTS7Q9UKP4 1686 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 A0A1B0GTH6 734 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 H3BQF6 201 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 GYPCP04921 128 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 KLRK1P26718 216 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 TTC38Q5R3I4 469 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 SPATA1Q5VX52 437 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 RGS22Q8NE09 1264 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 ZSCAN10Q96SZ4 725 aaPredicted RBP12.35□□□□□ -0.43
LRIF1-201ENST00000369763 PNKPQ96T60 521 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 CHP1Q99653 195 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 CPVLQ9H3G5 476 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 VPS18Q9P253 973 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 HDAC6Q9UBN7 1215 aa12.35□□□□□ -0.43
LRIF1-201ENST00000369763 CDHR2Q9BYE9 1310 aa12.34□□□□□ -0.43
LRIF1-201ENST00000369763 FAM237AA0A1B0GTK4 181 aa12.34□□□□□ -0.43
LRIF1-201ENST00000369763 MRPS25P82663 173 aaKnown RBP12.34□□□□□ -0.43
LRIF1-201ENST00000369763 C3orf67Q6ZVT6 689 aa12.34□□□□□ -0.43
LRIF1-201ENST00000369763 SLC51AQ86UW1 340 aa12.34□□□□□ -0.43
LRIF1-201ENST00000369763 GPR161Q8N6U8 529 aaKnown RBP12.34□□□□□ -0.43
LRIF1-201ENST00000369763 KRT31Q15323 416 aa12.34□□□□□ -0.43
LRIF1-201ENST00000369763 CCDC102AQ96A19 550 aa12.34□□□□□ -0.43
LRIF1-201ENST00000369763 RNF41Q9H4P4 317 aaPredicted RBP12.34□□□□□ -0.43
LRIF1-201ENST00000369763 TJP1Q07157 1748 aa12.34□□□□□ -0.43
LRIF1-201ENST00000369763 SRGAP2O75044 1071 aa12.34□□□□□ -0.43
LRIF1-201ENST00000369763 CYP2C19P33261 490 aa12.34□□□□□ -0.43
LRIF1-201ENST00000369763 KRT9P35527 623 aa12.34□□□□□ -0.43
LRIF1-201ENST00000369763 UBXN1Q04323 297 aa12.34□□□□□ -0.43
LRIF1-201ENST00000369763 FKBP15Q5T1M5 1219 aa12.34□□□□□ -0.43
LRIF1-201ENST00000369763 IQCA1Q86XH1 822 aa12.34□□□□□ -0.43
LRIF1-201ENST00000369763 ADD3Q9UEY8 706 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms