RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 SGPP1Q9BX95 441 aa6.28□□□□□ -1.4
ECHDC1-201ENST00000368287 CWC22Q9HCG8 908 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-201ENST00000368287 PODXL2Q9NZ53 605 aa6.28□□□□□ -1.4
ECHDC1-201ENST00000368287 OTOL1A6NHN0 477 aaPredicted RBP6.27□□□□□ -1.41
ECHDC1-201ENST00000368287 BMP6P22004 513 aa6.27□□□□□ -1.41
ECHDC1-201ENST00000368287 PDE6BP35913 854 aa6.27□□□□□ -1.41
ECHDC1-201ENST00000368287 OXR1Q8N573 874 aa6.27□□□□□ -1.41
ECHDC1-201ENST00000368287 SP110Q9HB58 689 aa6.27□□□□□ -1.41
ECHDC1-201ENST00000368287 GCM1Q9NP62 436 aa6.27□□□□□ -1.41
ECHDC1-201ENST00000368287 CAP2P40123 477 aa6.26□□□□□ -1.41
ECHDC1-201ENST00000368287 ARHGAP4P98171 946 aa6.26□□□□□ -1.41
ECHDC1-201ENST00000368287 SSPNQ14714 243 aa6.26□□□□□ -1.41
ECHDC1-201ENST00000368287 LRRC14Q15048 493 aa6.26□□□□□ -1.41
ECHDC1-201ENST00000368287 NKG7Q16617 165 aa6.26□□□□□ -1.41
ECHDC1-201ENST00000368287 TPTE2Q6XPS3 522 aa6.26□□□□□ -1.41
ECHDC1-201ENST00000368287 PIWIL2Q8TC59 973 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-201ENST00000368287 XAGE3Q8WTP9 111 aa6.26□□□□□ -1.41
ECHDC1-201ENST00000368287 ZNF552Q9H707 407 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-201ENST00000368287 YBX2Q9Y2T7 364 aaKnown RBP6.26□□□□□ -1.41
ECHDC1-201ENST00000368287 FITM1A5D6W6 292 aa6.25□□□□□ -1.41
ECHDC1-201ENST00000368287 WASH4PA8MWX3 477 aa6.25□□□□□ -1.41
ECHDC1-201ENST00000368287 PI3P19957 117 aa6.25□□□□□ -1.41
ECHDC1-201ENST00000368287 TIGD5Q53EQ6 642 aa6.25□□□□□ -1.41
ECHDC1-201ENST00000368287 LRFN4Q6PJG9 635 aa6.25□□□□□ -1.41
ECHDC1-201ENST00000368287 TXNDC2Q86VQ3 553 aa6.25□□□□□ -1.41
ECHDC1-201ENST00000368287 WNT10AQ9GZT5 417 aa6.25□□□□□ -1.41
ECHDC1-201ENST00000368287 GNEQ9Y223 722 aaKnown RBP6.25□□□□□ -1.41
ECHDC1-201ENST00000368287 ZBTB7CA1YPR0 619 aa6.24□□□□□ -1.41
ECHDC1-201ENST00000368287 ENC1O14682 589 aa6.24□□□□□ -1.41
ECHDC1-201ENST00000368287 PSPNO60542 156 aa6.24□□□□□ -1.41
ECHDC1-201ENST00000368287 PAGE1O75459 146 aa6.24□□□□□ -1.41
ECHDC1-201ENST00000368287 IGHA2P01877 340 aa6.24□□□□□ -1.41
ECHDC1-201ENST00000368287 ZGLP1P0C6A0 271 aa6.24□□□□□ -1.41
ECHDC1-201ENST00000368287 TPP2P29144 1249 aaPredicted RBP6.24□□□□□ -1.41
ECHDC1-201ENST00000368287 ETF1P62495 437 aaKnown RBP6.24□□□□□ -1.41
ECHDC1-201ENST00000368287 INPP5AQ14642 412 aa6.24□□□□□ -1.41
ECHDC1-201ENST00000368287 PRAMEF13Q5VWM6 474 aa6.24□□□□□ -1.41
ECHDC1-201ENST00000368287 SCARA3Q6AZY7 606 aa6.24□□□□□ -1.41
ECHDC1-201ENST00000368287 NXPE4Q6UWF7 544 aa6.24□□□□□ -1.41
ECHDC1-201ENST00000368287 HID1Q8IV36 788 aa6.24□□□□□ -1.41
ECHDC1-201ENST00000368287 FEZF2Q8TBJ5 459 aa6.24□□□□□ -1.41
ECHDC1-201ENST00000368287 CEP44Q9C0F1 390 aa6.24□□□□□ -1.41
ECHDC1-201ENST00000368287 RBAK-RBAKDNI3L0D1 243 aa6.23□□□□□ -1.41
ECHDC1-201ENST00000368287 SERPINB4P48594 390 aa6.23□□□□□ -1.41
ECHDC1-201ENST00000368287 AFF3P51826 1226 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-201ENST00000368287 EGR3Q06889 387 aa6.23□□□□□ -1.41
ECHDC1-201ENST00000368287 ZXDCQ2QGD7 858 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-201ENST00000368287 HDXQ7Z353 690 aa6.23□□□□□ -1.41
ECHDC1-201ENST00000368287 CDH24Q86UP0 819 aa6.23□□□□□ -1.41
ECHDC1-201ENST00000368287 SYTL4Q96C24 671 aaPredicted RBP6.23□□□□□ -1.41
ECHDC1-201ENST00000368287 PLPPR2Q96GM1 343 aa6.23□□□□□ -1.41
ECHDC1-201ENST00000368287 TRIT1Q9H3H1 467 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-201ENST00000368287 DUSP13Q9UII6 198 aa6.23□□□□□ -1.41
ECHDC1-201ENST00000368287 GPR160Q9UJ42 338 aa6.23□□□□□ -1.41
ECHDC1-201ENST00000368287 IRAK3Q9Y616 596 aa6.23□□□□□ -1.41
ECHDC1-201ENST00000368287 IVNS1ABPQ9Y6Y0 642 aa6.23□□□□□ -1.41
ECHDC1-201ENST00000368287 CST3P01034 146 aaPredicted RBP6.22□□□□□ -1.41
ECHDC1-201ENST00000368287 NR0B2Q15466 257 aa6.22□□□□□ -1.41
ECHDC1-201ENST00000368287 ZDHHC14Q8IZN3 488 aa6.22□□□□□ -1.41
ECHDC1-201ENST00000368287 PANK1Q8TE04 598 aa6.22□□□□□ -1.41
ECHDC1-201ENST00000368287 DHX38Q92620 1227 aaKnown RBP6.22□□□□□ -1.41
ECHDC1-201ENST00000368287 SIGLEC10Q96LC7 697 aa6.22□□□□□ -1.41
ECHDC1-201ENST00000368287 DMRTB1Q96MA1 342 aa6.22□□□□□ -1.41
ECHDC1-201ENST00000368287 GZF1Q9H116 711 aaPredicted RBP6.22□□□□□ -1.41
ECHDC1-201ENST00000368287 GAB4Q2WGN9 574 aa6.21□□□□□ -1.42
ECHDC1-201ENST00000368287 SPATS1Q496A3 300 aa6.21□□□□□ -1.42
ECHDC1-201ENST00000368287 RASIP1Q5U651 963 aa6.21□□□□□ -1.42
ECHDC1-201ENST00000368287 SP8Q8IXZ3 490 aa6.21□□□□□ -1.42
ECHDC1-201ENST00000368287 C3orf58Q8NDZ4 430 aa6.21□□□□□ -1.42
ECHDC1-201ENST00000368287 ALKBH8Q96BT7 664 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-201ENST00000368287 GPATCH2Q9NW75 528 aa6.21□□□□□ -1.42
ECHDC1-201ENST00000368287 CYP8B1Q9UNU6 501 aa6.21□□□□□ -1.42
ECHDC1-201ENST00000368287 SLC22A31A6NKX4 558 aa6.2□□□□□ -1.42
ECHDC1-201ENST00000368287 FBXO24O75426 580 aa6.2□□□□□ -1.42
ECHDC1-201ENST00000368287 LTKP29376 864 aa6.2□□□□□ -1.42
ECHDC1-201ENST00000368287 SNX17Q15036 470 aa6.2□□□□□ -1.42
ECHDC1-201ENST00000368287 SPPL2CQ8IUH8 684 aa6.2□□□□□ -1.42
ECHDC1-201ENST00000368287 DACT3Q96B18 629 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-201ENST00000368287 DUSP15Q9H1R2 295 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-201ENST00000368287 BIN2Q9UBW5 565 aaPredicted RBP6.2□□□□□ -1.42
ECHDC1-201ENST00000368287 SOWAHDA6NJG2 315 aa6.19□□□□□ -1.42
ECHDC1-201ENST00000368287 GSTT1P30711 240 aa6.19□□□□□ -1.42
ECHDC1-201ENST00000368287 ETV3P41162 512 aa6.19□□□□□ -1.42
ECHDC1-201ENST00000368287 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.19□□□□□ -1.42
ECHDC1-201ENST00000368287 PPP1R13LQ8WUF5 828 aa6.19□□□□□ -1.42
ECHDC1-201ENST00000368287 Q96M66 194 aa6.19□□□□□ -1.42
ECHDC1-201ENST00000368287 TEPSINQ96N21 525 aa6.19□□□□□ -1.42
ECHDC1-201ENST00000368287 OR14I1A6ND48 311 aa6.18□□□□□ -1.42
ECHDC1-201ENST00000368287 CHRNEQ04844 493 aa6.18□□□□□ -1.42
ECHDC1-201ENST00000368287 EFEMP1Q12805 493 aa6.18□□□□□ -1.42
ECHDC1-201ENST00000368287 WIPI1Q5MNZ9 446 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-201ENST00000368287 MBD1Q9UIS9 605 aaPredicted RBP6.18□□□□□ -1.42
ECHDC1-201ENST00000368287 PPM1HQ9ULR3 514 aa6.18□□□□□ -1.42
ECHDC1-201ENST00000368287 SNCAIPQ9Y6H5 919 aa6.18□□□□□ -1.42
ECHDC1-201ENST00000368287 INSRRP14616 1297 aa6.17□□□□□ -1.42
ECHDC1-201ENST00000368287 GRK4P32298 578 aa6.17□□□□□ -1.42
ECHDC1-201ENST00000368287 GALK1P51570 392 aa6.17□□□□□ -1.42
ECHDC1-201ENST00000368287 SRSF3P84103 164 aaKnown RBP6.17□□□□□ -1.42
ECHDC1-201ENST00000368287 PLP2Q04941 152 aa6.17□□□□□ -1.42
ECHDC1-201ENST00000368287 PTPN11Q06124 597 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms