RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 KDM5DQ9BY66 1539 aa13.63□□□□□ -0.23
SHPRH-202ENST00000367503 GCP02774 474 aa13.63□□□□□ -0.23
SHPRH-202ENST00000367503 TMEM51Q9NW97 253 aa13.63□□□□□ -0.23
SHPRH-202ENST00000367503 IQSEC3Q9UPP2 1182 aaPredicted RBP13.63□□□□□ -0.23
SHPRH-202ENST00000367503 MCM7P33993 719 aa13.63□□□□□ -0.23
SHPRH-202ENST00000367503 PLCD1P51178 756 aa13.63□□□□□ -0.23
SHPRH-202ENST00000367503 VPS52Q8N1B4 723 aa13.63□□□□□ -0.23
SHPRH-202ENST00000367503 PLBD2Q8NHP8 589 aa13.63□□□□□ -0.23
SHPRH-202ENST00000367503 IFIH1Q9BYX4 1025 aaKnown RBP13.63□□□□□ -0.23
SHPRH-202ENST00000367503 KLHL14Q9P2G3 628 aa13.63□□□□□ -0.23
SHPRH-202ENST00000367503 GCC2Q8IWJ2 1684 aa13.62□□□□□ -0.23
SHPRH-202ENST00000367503 IKBKBO14920 756 aa13.62□□□□□ -0.23
SHPRH-202ENST00000367503 GOLGA8FQ08AF8 430 aa13.62□□□□□ -0.23
SHPRH-202ENST00000367503 GOLGA8DPQ0D2H9 430 aa13.62□□□□□ -0.23
SHPRH-202ENST00000367503 PPP2R5BQ15173 497 aa13.62□□□□□ -0.23
SHPRH-202ENST00000367503 PHLDB3Q6NSJ2 640 aa13.62□□□□□ -0.23
SHPRH-202ENST00000367503 DIS3L2Q8IYB7 885 aaKnown RBP13.62□□□□□ -0.23
SHPRH-202ENST00000367503 CCDC110Q8TBZ0 833 aa13.62□□□□□ -0.23
SHPRH-202ENST00000367503 PCDHA7Q9UN72 937 aa13.62□□□□□ -0.23
SHPRH-202ENST00000367503 VWA3AA6NCI4 1184 aa13.62□□□□□ -0.23
SHPRH-202ENST00000367503 TMEM110-MUSTN1A8MSY1 372 aa13.62□□□□□ -0.23
SHPRH-202ENST00000367503 RGS16O15492 202 aaPredicted RBP13.62□□□□□ -0.23
SHPRH-202ENST00000367503 TCP1P17987 556 aaKnown RBP13.62□□□□□ -0.23
SHPRH-202ENST00000367503 EPHB4P54760 987 aa13.62□□□□□ -0.23
SHPRH-202ENST00000367503 PLA2G4DQ86XP0 818 aa13.62□□□□□ -0.23
SHPRH-202ENST00000367503 IRS4O14654 1257 aaPredicted RBP13.62□□□□□ -0.23
SHPRH-202ENST00000367503 MYSM1Q5VVJ2 828 aa13.62□□□□□ -0.23
SHPRH-202ENST00000367503 DENND2CQ68D51 928 aa13.62□□□□□ -0.23
SHPRH-202ENST00000367503 CCDC62Q6P9F0 684 aa13.62□□□□□ -0.23
SHPRH-202ENST00000367503 GSTA5Q7RTV2 222 aa13.62□□□□□ -0.23
SHPRH-202ENST00000367503 VCX3AQ9NNX9 186 aa13.62□□□□□ -0.23
SHPRH-202ENST00000367503 ATP5JP18859 108 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 NDUFA8P51970 172 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 ZNF790Q6PG37 636 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 ARMC2Q8NEN0 867 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 TSC22D3Q99576 134 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 OSBPL3Q9H4L5 887 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 LARSQ9P2J5 1176 aaKnown RBP13.61□□□□□ -0.23
SHPRH-202ENST00000367503 KIF21AQ7Z4S6 1674 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 CMA1P23946 247 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 MUM1L1Q5H9M0 696 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 ARMC9Q7Z3E5 817 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 CSGALNACT2Q8N6G5 542 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 DSCC1Q9BVC3 393 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 USP44Q9H0E7 712 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 UNC13AQ9UPW8 1703 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 NCKAP5LQ9HCH0 1330 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 B4E1Z4 1266 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 DPCR1Q3MIW9 517 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 RASEFQ8IZ41 740 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 NLRP3Q96P20 1036 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 MAPK8IP1Q9UQF2 711 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 SF3B2Q13435 895 aaKnown RBP13.61□□□□□ -0.23
SHPRH-202ENST00000367503 RAPGEF1Q13905 1077 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 SEL1L2Q5TEA6 688 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 CNPY4Q8N129 248 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 RRP36Q96EU6 259 aaKnown RBP13.61□□□□□ -0.23
SHPRH-202ENST00000367503 SH3GL3Q99963 347 aa13.61□□□□□ -0.23
SHPRH-202ENST00000367503 USP27XA6NNY8 438 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 ZMYND10O75800 440 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 MBD4O95243 580 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 RPS6KA1Q15418 735 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 SUCLG2Q96I99 432 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 DISP1Q96F81 1524 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 SLC9C1Q4G0N8 1177 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 VWA3BQ502W6 1294 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 HIBCHQ6NVY1 386 aaPredicted RBP13.6□□□□□ -0.23
SHPRH-202ENST00000367503 HOMER3Q9NSC5 361 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 STAP2Q9UGK3 403 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 MAGI2Q86UL8 1455 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 A0A1W2PQ27 194 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 A0A1W2PQ64 194 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 A0A1W2PQD8 194 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 IRX1P78414 480 aaPredicted RBP13.6□□□□□ -0.23
SHPRH-202ENST00000367503 SLMAPQ14BN4 828 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 TAF11Q15544 211 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 ZNF174Q15697 407 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 KRT40Q6A162 431 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 HINFPQ9BQA5 517 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 KCNF1Q9H3M0 494 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 TBX22Q9Y458 520 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 NNTQ13423 1086 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 NBPF6Q5VWK0 638 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 NBPF5PQ86XG9 351 aaPredicted RBP13.6□□□□□ -0.23
SHPRH-202ENST00000367503 MIGA1Q8NAN2 632 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 NBPF4Q96M43 638 aa13.6□□□□□ -0.23
SHPRH-202ENST00000367503 EPN1Q9Y6I3 576 aaPredicted RBP13.6□□□□□ -0.23
SHPRH-202ENST00000367503 TXNDC9O14530 226 aa13.59□□□□□ -0.23
SHPRH-202ENST00000367503 GPAA1O43292 621 aa13.59□□□□□ -0.23
SHPRH-202ENST00000367503 ZNF274Q96GC6 653 aaPredicted RBP13.59□□□□□ -0.23
SHPRH-202ENST00000367503 CASQ2O14958 399 aaPredicted RBP13.59□□□□□ -0.23
SHPRH-202ENST00000367503 POLE2P56282 527 aa13.59□□□□□ -0.23
SHPRH-202ENST00000367503 GCKRQ14397 625 aa13.59□□□□□ -0.23
SHPRH-202ENST00000367503 BEND3Q5T5X7 828 aa13.59□□□□□ -0.23
SHPRH-202ENST00000367503 HS2ST1Q7LGA3 356 aa13.59□□□□□ -0.23
SHPRH-202ENST00000367503 CCHCR1Q8TD31 782 aa13.59□□□□□ -0.23
SHPRH-202ENST00000367503 MGARPQ8TDB4 240 aa13.59□□□□□ -0.23
SHPRH-202ENST00000367503 NELFBQ8WX92 580 aa13.59□□□□□ -0.23
SHPRH-202ENST00000367503 KLHDC4Q8TBB5 520 aa13.59□□□□□ -0.23
SHPRH-202ENST00000367503 SERTAD1Q9UHV2 236 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms