RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 SPACA7Q96KW9 195 aa8.65□□□□□ -1.02
CLCN3-202ENST00000360642 KANSL3Q9P2N6 904 aa8.65□□□□□ -1.02
CLCN3-202ENST00000360642 TMA7Q9Y2S6 64 aaKnown RBP8.65□□□□□ -1.02
CLCN3-202ENST00000360642 AK5Q9Y6K8 562 aa8.65□□□□□ -1.02
CLCN3-202ENST00000360642 AFDNP55196 1824 aaKnown RBP8.65□□□□□ -1.03
CLCN3-202ENST00000360642 TNFRSF21O75509 655 aa8.65□□□□□ -1.03
CLCN3-202ENST00000360642 TNNI3KQ59H18 835 aa8.65□□□□□ -1.03
CLCN3-202ENST00000360642 CCDC83Q8IWF9 413 aa8.65□□□□□ -1.03
CLCN3-202ENST00000360642 PLBD2Q8NHP8 589 aa8.65□□□□□ -1.03
CLCN3-202ENST00000360642 DBNLQ9UJU6 430 aaKnown RBP8.65□□□□□ -1.03
CLCN3-202ENST00000360642 TPCN1Q9ULQ1 816 aa8.65□□□□□ -1.03
CLCN3-202ENST00000360642 MTMR6Q9Y217 621 aa8.65□□□□□ -1.03
CLCN3-202ENST00000360642 CNPY2Q9Y2B0 182 aa8.65□□□□□ -1.03
CLCN3-202ENST00000360642 FPGT-TNNI3KV9GXZ4 949 aa8.65□□□□□ -1.03
CLCN3-202ENST00000360642 FGRP09769 529 aa8.64□□□□□ -1.03
CLCN3-202ENST00000360642 GJB2P29033 226 aa8.64□□□□□ -1.03
CLCN3-202ENST00000360642 CABP4P57796 275 aa8.64□□□□□ -1.03
CLCN3-202ENST00000360642 CENPCQ03188 943 aa8.64□□□□□ -1.03
CLCN3-202ENST00000360642 FAM160A1Q05DH4 1040 aa8.64□□□□□ -1.03
CLCN3-202ENST00000360642 COL9A3Q14050 684 aaPredicted RBP8.64□□□□□ -1.03
CLCN3-202ENST00000360642 ALKBH2Q6NS38 261 aa8.64□□□□□ -1.03
CLCN3-202ENST00000360642 EMID1Q96A84 441 aaPredicted RBP8.64□□□□□ -1.03
CLCN3-202ENST00000360642 FSD1Q9BTV5 496 aa8.64□□□□□ -1.03
CLCN3-202ENST00000360642 TLR6Q9Y2C9 796 aa8.64□□□□□ -1.03
CLCN3-202ENST00000360642 TAF5LO75529 589 aa8.64□□□□□ -1.03
CLCN3-202ENST00000360642 PSMA5P28066 241 aa8.64□□□□□ -1.03
CLCN3-202ENST00000360642 TFCP2Q12800 502 aa8.64□□□□□ -1.03
CLCN3-202ENST00000360642 ZNF589Q86UQ0 364 aaPredicted RBP8.64□□□□□ -1.03
CLCN3-202ENST00000360642 CMTR1Q8N1G2 835 aaKnown RBP8.64□□□□□ -1.03
CLCN3-202ENST00000360642 DDX54Q8TDD1 881 aaKnown RBP8.64□□□□□ -1.03
CLCN3-202ENST00000360642 JARID2Q92833 1246 aaPredicted RBP8.64□□□□□ -1.03
CLCN3-202ENST00000360642 CCDC74AQ96AQ1 378 aa8.64□□□□□ -1.03
CLCN3-202ENST00000360642 ZNF408Q9H9D4 720 aa8.64□□□□□ -1.03
CLCN3-202ENST00000360642 KLHL42Q9P2K6 505 aa8.64□□□□□ -1.03
CLCN3-202ENST00000360642 RFX7Q2KHR2 1363 aa8.64□□□□□ -1.03
CLCN3-202ENST00000360642 ALDH1A1P00352 501 aa8.63□□□□□ -1.03
CLCN3-202ENST00000360642 NBPF10Q6P3W6 841 aaKnown RBP8.63□□□□□ -1.03
CLCN3-202ENST00000360642 UBE3BQ7Z3V4 1068 aa8.63□□□□□ -1.03
CLCN3-202ENST00000360642 NBPF15Q8N660 670 aa8.63□□□□□ -1.03
CLCN3-202ENST00000360642 ALKBH8Q96BT7 664 aaKnown RBP8.63□□□□□ -1.03
CLCN3-202ENST00000360642 TSPY26PQ9H489 355 aa8.63□□□□□ -1.03
CLCN3-202ENST00000360642 ATP6V1DQ9Y5K8 247 aa8.63□□□□□ -1.03
CLCN3-202ENST00000360642 UBR2Q8IWV8 1755 aa8.63□□□□□ -1.03
CLCN3-202ENST00000360642 A0A087WZG4 1122 aa8.63□□□□□ -1.03
CLCN3-202ENST00000360642 H7C1W4 665 aa8.63□□□□□ -1.03
CLCN3-202ENST00000360642 ADH1CP00326 375 aa8.63□□□□□ -1.03
CLCN3-202ENST00000360642 GNRH1P01148 92 aa8.63□□□□□ -1.03
CLCN3-202ENST00000360642 UBE2HP62256 183 aa8.63□□□□□ -1.03
CLCN3-202ENST00000360642 ALG1LQ6GMV1 187 aa8.63□□□□□ -1.03
CLCN3-202ENST00000360642 CYP2U1Q7Z449 544 aa8.63□□□□□ -1.03
CLCN3-202ENST00000360642 HMG20BQ9P0W2 317 aa8.63□□□□□ -1.03
CLCN3-202ENST00000360642 NOL7Q9UMY1 257 aaKnown RBP8.63□□□□□ -1.03
CLCN3-202ENST00000360642 TAF6LQ9Y6J9 622 aa8.63□□□□□ -1.03
CLCN3-202ENST00000360642 RPS6KB1P23443 525 aa8.63□□□□□ -1.03
CLCN3-202ENST00000360642 ETFBP38117 255 aa8.63□□□□□ -1.03
CLCN3-202ENST00000360642 FOXO4P98177 505 aa8.63□□□□□ -1.03
CLCN3-202ENST00000360642 SDE2Q6IQ49 451 aa8.63□□□□□ -1.03
CLCN3-202ENST00000360642 EDC3Q96F86 508 aaKnown RBP8.63□□□□□ -1.03
CLCN3-202ENST00000360642 NUP188Q5SRE5 1749 aa8.62□□□□□ -1.03
CLCN3-202ENST00000360642 ATF4P18848 351 aaPredicted RBP8.62□□□□□ -1.03
CLCN3-202ENST00000360642 EIF4BP23588 611 aaKnown RBP8.62□□□□□ -1.03
CLCN3-202ENST00000360642 GNL2Q13823 731 aaKnown RBP8.62□□□□□ -1.03
CLCN3-202ENST00000360642 TOB2Q14106 344 aaPredicted RBP8.62□□□□□ -1.03
CLCN3-202ENST00000360642 HAUS7Q99871 368 aa8.62□□□□□ -1.03
CLCN3-202ENST00000360642 KCNJ4P48050 445 aa8.62□□□□□ -1.03
CLCN3-202ENST00000360642 ANKRD1Q15327 319 aa8.62□□□□□ -1.03
CLCN3-202ENST00000360642 C11orf91Q3C1V1 193 aa8.62□□□□□ -1.03
CLCN3-202ENST00000360642 CCDC183Q5T5S1 534 aa8.62□□□□□ -1.03
CLCN3-202ENST00000360642 BLOC1S2Q6QNY1 142 aa8.62□□□□□ -1.03
CLCN3-202ENST00000360642 NECAB1Q8N987 351 aa8.62□□□□□ -1.03
CLCN3-202ENST00000360642 PAPPAQ13219 1627 aa8.62□□□□□ -1.03
CLCN3-202ENST00000360642 KCPQ6ZWJ8 1503 aa8.62□□□□□ -1.03
CLCN3-202ENST00000360642 WDR17Q8IZU2 1322 aa8.62□□□□□ -1.03
CLCN3-202ENST00000360642 XIRP1Q702N8 1843 aaKnown RBP8.61□□□□□ -1.03
CLCN3-202ENST00000360642 ERVV-2B6SEH9 535 aa8.61□□□□□ -1.03
CLCN3-202ENST00000360642 EREGO14944 169 aa8.61□□□□□ -1.03
CLCN3-202ENST00000360642 METTL5Q9NRN9 209 aaKnown RBP8.61□□□□□ -1.03
CLCN3-202ENST00000360642 PCDH11XQ9BZA7 1347 aa8.61□□□□□ -1.03
CLCN3-202ENST00000360642 PCDH11YQ9BZA8 1340 aa8.61□□□□□ -1.03
CLCN3-202ENST00000360642 TLDC2A0PJX2 215 aa8.61□□□□□ -1.03
CLCN3-202ENST00000360642 LETM1O95202 739 aaPredicted RBP8.61□□□□□ -1.03
CLCN3-202ENST00000360642 ATG9AQ7Z3C6 839 aa8.61□□□□□ -1.03
CLCN3-202ENST00000360642 MICAL1Q8TDZ2 1067 aa8.61□□□□□ -1.03
CLCN3-202ENST00000360642 CITED4Q96RK1 184 aa8.61□□□□□ -1.03
CLCN3-202ENST00000360642 DBNDD2Q9BQY9 259 aa8.61□□□□□ -1.03
CLCN3-202ENST00000360642 ZNF609O15014 1411 aa8.61□□□□□ -1.03
CLCN3-202ENST00000360642 TJP1Q07157 1748 aa8.61□□□□□ -1.03
CLCN3-202ENST00000360642 LMBR1LQ6UX01 489 aa8.61□□□□□ -1.03
CLCN3-202ENST00000360642 LIAT1Q6ZQX7 453 aa8.61□□□□□ -1.03
CLCN3-202ENST00000360642 BRINP3Q76B58 766 aa8.61□□□□□ -1.03
CLCN3-202ENST00000360642 TICAM2Q86XR7 235 aa8.61□□□□□ -1.03
CLCN3-202ENST00000360642 FAM184AQ8NB25 1140 aa8.61□□□□□ -1.03
CLCN3-202ENST00000360642 RNF214Q8ND24 703 aa8.61□□□□□ -1.03
CLCN3-202ENST00000360642 ZCRB1Q8TBF4 217 aaKnown RBP8.61□□□□□ -1.03
CLCN3-202ENST00000360642 MYO19Q96H55 970 aa8.61□□□□□ -1.03
CLCN3-202ENST00000360642 ZNF500O60304 480 aaPredicted RBP8.6□□□□□ -1.03
CLCN3-202ENST00000360642 RTN1Q16799 776 aa8.6□□□□□ -1.03
CLCN3-202ENST00000360642 UVSSAQ2YD98 709 aa8.6□□□□□ -1.03
CLCN3-202ENST00000360642 EGFLAMQ63HQ2 1017 aa8.6□□□□□ -1.03
CLCN3-202ENST00000360642 ANKRD13AQ8IZ07 590 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms