RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 GAKO14976 1311 aa12.53□□□□□ -0.4
TRAPPC4-201ENST00000359005 ZNF646O15015 1829 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC4-201ENST00000359005 LAMB1P07942 1786 aa12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 PTPDC1A2A3K4 754 aa12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 RANBP6O60518 1105 aaKnown RBP12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 XBP1P17861 261 aa12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 ANTXR2P58335 489 aa12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 FKBP1BP68106 108 aa12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 KRT85P78386 507 aa12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 MKRN3Q13064 507 aaKnown RBP12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 RASA3Q14644 834 aa12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 GSE1Q14687 1217 aa12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 KLHL40Q2TBA0 621 aa12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 CHST3Q7LGC8 479 aa12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 TTC6Q86TZ1 520 aa12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 IGDCC4Q8TDY8 1250 aa12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 CLMNQ96JQ2 1002 aa12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 ZSCAN10Q96SZ4 725 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 SCAND2PQ9GZW5 306 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 TDRD3Q9H7E2 651 aaKnown RBP12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 MKNK2Q9HBH9 465 aa12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 RBM28Q9NW13 759 aaKnown RBP12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 ZNF70Q9UC06 446 aaPredicted RBP12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 CFAP45Q9UL16 551 aa12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 DDX49Q9Y6V7 483 aaKnown RBP12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 NEDD4P46934 1319 aa12.52□□□□□ -0.41
TRAPPC4-201ENST00000359005 GOLGA8AA7E2F4 631 aa12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 TRPA1O75762 1119 aa12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 CRKP46108 304 aa12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 RBM5P52756 815 aaKnown RBP eCLIP12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 CACNB3P54284 484 aa12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 CCT2P78371 535 aaKnown RBP12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 AKAP17AQ02040 695 aaKnown RBP12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 TTLL12Q14166 644 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 SPDYE2Q495Y8 402 aa12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 IFIT1BQ5T764 474 aaKnown RBP12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 C12orf60Q5U649 245 aa12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 APOA5Q6Q788 366 aa12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 APOBEC3FQ8IUX4 373 aaKnown RBP12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 ZNF444Q8N0Y2 327 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 NSUN7Q8NE18 718 aaKnown RBP12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 ZNF396Q96N95 335 aaPredicted RBP12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 BEGAINQ9BUH8 593 aa12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 NBPF3Q9H094 633 aa12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 LY9Q9HBG7 655 aa12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 VEZTQ9HBM0 779 aa12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 RBM27Q9P2N5 1060 aaKnown RBP12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 ZDHHC9Q9Y397 364 aa12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 ROBO3Q96MS0 1386 aa12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 SSC5DA1L4H1 1573 aa12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 TRPM7Q96QT4 1865 aa12.51□□□□□ -0.41
TRAPPC4-201ENST00000359005 MYH2Q9UKX2 1941 aa12.5□□□□□ -0.41
TRAPPC4-201ENST00000359005 TSPY2A6NKD2 308 aa12.5□□□□□ -0.41
TRAPPC4-201ENST00000359005 KIF5BP33176 963 aa12.5□□□□□ -0.41
TRAPPC4-201ENST00000359005 SSRP1Q08945 709 aaKnown RBP12.5□□□□□ -0.41
TRAPPC4-201ENST00000359005 APOBEC3HQ6NTF7 200 aaKnown RBP12.5□□□□□ -0.41
TRAPPC4-201ENST00000359005 CYB5R4Q7L1T6 521 aa12.5□□□□□ -0.41
TRAPPC4-201ENST00000359005 SH3RF3Q8TEJ3 882 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-201ENST00000359005 ZNF384Q8TF68 577 aa12.5□□□□□ -0.41
TRAPPC4-201ENST00000359005 TEPSINQ96N21 525 aa12.5□□□□□ -0.41
TRAPPC4-201ENST00000359005 R3HDMLQ9H3Y0 253 aa12.5□□□□□ -0.41
TRAPPC4-201ENST00000359005 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC4-201ENST00000359005 SERPINA10Q9UK55 444 aa12.5□□□□□ -0.41
TRAPPC4-201ENST00000359005 MTMR6Q9Y217 621 aa12.5□□□□□ -0.41
TRAPPC4-201ENST00000359005 STK36Q9NRP7 1315 aa12.5□□□□□ -0.41
TRAPPC4-201ENST00000359005 NID2Q14112 1375 aa12.5□□□□□ -0.41
TRAPPC4-201ENST00000359005 THSD7BQ9C0I4 1608 aa12.49□□□□□ -0.41
TRAPPC4-201ENST00000359005 TNKSO95271 1327 aa12.49□□□□□ -0.41
TRAPPC4-201ENST00000359005 GOLGA6L4A6NEF3 574 aa12.49□□□□□ -0.41
TRAPPC4-201ENST00000359005 TCP10L2B9ZVM9 353 aa12.49□□□□□ -0.41
TRAPPC4-201ENST00000359005 USP2O75604 605 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC4-201ENST00000359005 DDAH1O94760 285 aa12.49□□□□□ -0.41
TRAPPC4-201ENST00000359005 HLA-DOAP06340 250 aa12.49□□□□□ -0.41
TRAPPC4-201ENST00000359005 GJA5P36382 358 aa12.49□□□□□ -0.41
TRAPPC4-201ENST00000359005 PKP1Q13835 747 aa12.49□□□□□ -0.41
TRAPPC4-201ENST00000359005 DIXDC1Q155Q3 683 aa12.49□□□□□ -0.41
TRAPPC4-201ENST00000359005 RTN1Q16799 776 aa12.49□□□□□ -0.41
TRAPPC4-201ENST00000359005 DGKHQ86XP1 1220 aa12.49□□□□□ -0.41
TRAPPC4-201ENST00000359005 TMEM87AQ8NBN3 555 aa12.49□□□□□ -0.41
TRAPPC4-201ENST00000359005 TGFBRAP1Q8WUH2 860 aa12.49□□□□□ -0.41
TRAPPC4-201ENST00000359005 C8orf76Q96K31 380 aa12.49□□□□□ -0.41
TRAPPC4-201ENST00000359005 MAP3K14Q99558 947 aa12.49□□□□□ -0.41
TRAPPC4-201ENST00000359005 ORC3Q9UBD5 711 aaPredicted RBP12.49□□□□□ -0.41
TRAPPC4-201ENST00000359005 SWAP70Q9UH65 585 aa12.49□□□□□ -0.41
TRAPPC4-201ENST00000359005 NAV1Q8NEY1 1877 aa12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 PSME4Q14997 1843 aa12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 PRPF40AO75400 957 aaKnown RBP12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 LETM1O95202 739 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 TSPY3P0CV98 308 aa12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 TSPY8P0CW00 308 aa12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 GNAQP50148 359 aa12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 GNL2Q13823 731 aaKnown RBP12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 SAFBQ15424 915 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 MAP3K11Q16584 847 aa12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 L1TD1Q5T7N2 865 aaKnown RBP12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 FOXD4L5Q5VV16 416 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 BRAPQ7Z569 592 aa12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 MICU3Q86XE3 530 aa12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 CTCFLQ8NI51 663 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC4-201ENST00000359005 FOXD4L4Q8WXT5 416 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms