RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 EXOC7Q9UPT5 735 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 RAD51AP2Q09MP3 1159 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 TBC1D8BQ0IIM8 1120 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 LONRF3Q496Y0 759 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 PPP4R1Q8TF05 950 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 KSR1Q8IVT5 923 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 PDCD7Q8N8D1 485 aaKnown RBP12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 CHMP6Q96FZ7 201 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 PLEKHA4Q9H4M7 779 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 RIPOR2Q9Y4F9 1068 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 IVNS1ABPQ9Y6Y0 642 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 CCDC151A5D8V7 595 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 RNASELQ05823 741 aaKnown RBP12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 PLEKHM2Q8IWE5 1019 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 BEGAINQ9BUH8 593 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 ACTR5Q9H9F9 607 aaPredicted RBP12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 MRPL44Q9H9J2 332 aaKnown RBP12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 GRIN2BQ13224 1484 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 BRD2P25440 801 aaKnown RBP12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 PLCD1P51178 756 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 NLRP12P59046 1061 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 HOMEZQ8IX15 550 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 MAIP1Q8WWC4 291 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 MEIS3Q99687 375 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 IFRD2Q12894 506 aaPredicted RBP12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 CCHCR1Q8TD31 782 aa12.69□□□□□ -0.38
SPTBN1-202ENST00000356805 SYNRGQ9UMZ2 1314 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 KRT3P12035 628 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 PRKG1Q13976 671 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 KRT81Q14533 505 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 ICE2Q659A1 982 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 RSAD2Q8WXG1 361 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 SCYL1Q96KG9 808 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 PPP1R12AO14974 1030 aaPredicted RBP12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 CCDC105Q8IYK2 499 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 MYCT1Q8N699 235 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 PDZD8Q8NEN9 1154 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 P3H4Q92791 437 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 TRIM56Q9BRZ2 755 aaKnown RBP12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 ZNF215Q9UL58 517 aaPredicted RBP12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 GSTA1P08263 222 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 GSTA2P09210 222 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 IL15P40933 162 aaPredicted RBP12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 IL1RL1Q01638 556 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 SLC9C1Q4G0N8 1177 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 KLHL7Q8IXQ5 586 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 METTL13Q8N6R0 699 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 SH2D4AQ9H788 454 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 PFDN1O60925 122 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 RASEFQ8IZ41 740 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 POLR2DO15514 142 aaKnown RBP12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 RNF113AO15541 343 aaKnown RBP12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 CUTAO60888 179 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 OPHN1O60890 802 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 SAT1P21673 171 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 TRIM68Q6AZZ1 485 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 RBM17Q96I25 401 aaKnown RBP12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 KRT12Q99456 494 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 TROVE2P10155 538 aaKnown RBP eCLIP12.68□□□□□ -0.382e-11■□□□□ 10.1
SPTBN1-202ENST00000356805 CHMLP26374 656 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 CASP2P42575 452 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 NBPF9Q3BBW0 867 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 TPTE2Q6XPS3 522 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 POMGNT1Q8WZA1 660 aa12.68□□□□□ -0.38
SPTBN1-202ENST00000356805 MX2P20592 715 aa12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 GNGT1P63211 74 aa12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 CREB3L3Q68CJ9 461 aa12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 MMS22LQ6ZRQ5 1243 aa12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 PIK3AP1Q6ZUJ8 805 aa12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 DCLK2Q8N568 766 aa12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 ZMYM4Q5VZL5 1548 aa12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 KRT71Q3SY84 523 aa12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 BZW2Q9Y6E2 419 aaKnown RBP12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 FLOT1O75955 427 aa12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 XAB2Q9HCS7 855 aaKnown RBP12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 PCF11O94913 1555 aaKnown RBP12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 ESYT2A0FGR8 921 aa12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 ARHGAP42A6NI28 874 aa12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 MAGEA9P43362 315 aa12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 CDR2Q01850 454 aa12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 LRRC23Q53EV4 343 aaPredicted RBP12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 HAUS3Q68CZ6 603 aa12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 MCTP2Q6DN12 878 aa12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 VPS37BQ9H9H4 285 aa12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 TFCP2Q12800 502 aa12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 PPP4R4Q6NUP7 873 aa12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 SND1Q7KZF4 910 aaKnown RBP eCLIP12.67□□□□□ -0.388e-11■■■□□ 18.9
SPTBN1-202ENST00000356805 TEX11Q8IYF3 940 aa12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 AZI2Q9H6S1 392 aa12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 CTTNBP2NLQ9P2B4 639 aa12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 TXKP42681 527 aa12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 PPP2R5AQ15172 486 aa12.67□□□□□ -0.38
SPTBN1-202ENST00000356805 SPECC1L-ADORA2AF8WAN1 911 aa12.66□□□□□ -0.38
SPTBN1-202ENST00000356805 SORBS3O60504 671 aa12.66□□□□□ -0.38
SPTBN1-202ENST00000356805 BRD1O95696 1058 aa12.66□□□□□ -0.38
SPTBN1-202ENST00000356805 COG7P83436 770 aa12.66□□□□□ -0.38
SPTBN1-202ENST00000356805 PPP2R5BQ15173 497 aa12.66□□□□□ -0.38
SPTBN1-202ENST00000356805 PHLPP2Q6ZVD8 1323 aa12.66□□□□□ -0.38
SPTBN1-202ENST00000356805 TCP1P17987 556 aaKnown RBP12.66□□□□□ -0.38
SPTBN1-202ENST00000356805 SEPT2Q15019 361 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms