RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 RPS6KA2Q15349 733 aa16.45■□□□□ 0.22
LMX1B-201ENST00000355497 TYW1BQ6NUM6 668 aa16.45■□□□□ 0.22
LMX1B-201ENST00000355497 NELFCDQ8IXH7 590 aa16.45■□□□□ 0.22
LMX1B-201ENST00000355497 RSAD2Q8WXG1 361 aa16.45■□□□□ 0.22
LMX1B-201ENST00000355497 AZI2Q9H6S1 392 aa16.45■□□□□ 0.22
LMX1B-201ENST00000355497 TTLL3Q9Y4R7 772 aa16.45■□□□□ 0.22
LMX1B-201ENST00000355497 KRT12Q99456 494 aa16.45■□□□□ 0.22
LMX1B-201ENST00000355497 FLT4P35916 1363 aa16.45■□□□□ 0.22
LMX1B-201ENST00000355497 GNA14O95837 355 aa16.44■□□□□ 0.22
LMX1B-201ENST00000355497 CTNNA1P35221 906 aaKnown RBP16.44■□□□□ 0.22
LMX1B-201ENST00000355497 CCDC84Q86UT8 332 aaPredicted RBP16.44■□□□□ 0.22
LMX1B-201ENST00000355497 RIOK1Q9BRS2 568 aaKnown RBP16.44■□□□□ 0.22
LMX1B-201ENST00000355497 TFCP2L1Q9NZI6 479 aa16.44■□□□□ 0.22
LMX1B-201ENST00000355497 ARHGAP42A6NI28 874 aa16.44■□□□□ 0.22
LMX1B-201ENST00000355497 HIBADHP31937 336 aaKnown RBP16.44■□□□□ 0.22
LMX1B-201ENST00000355497 TSPYL6Q8N831 410 aa16.44■□□□□ 0.22
LMX1B-201ENST00000355497 WWC3Q9ULE0 1092 aa16.44■□□□□ 0.22
LMX1B-201ENST00000355497 GOLGA8KD6RF30 607 aa16.44■□□□□ 0.22
LMX1B-201ENST00000355497 KRT3P12035 628 aa16.44■□□□□ 0.22
LMX1B-201ENST00000355497 GPIHBP1Q8IV16 184 aa16.44■□□□□ 0.22
LMX1B-201ENST00000355497 GRK7Q8WTQ7 553 aa16.44■□□□□ 0.22
LMX1B-201ENST00000355497 LZTS2Q9BRK4 669 aa16.44■□□□□ 0.22
LMX1B-201ENST00000355497 KLHL14Q9P2G3 628 aa16.44■□□□□ 0.22
LMX1B-201ENST00000355497 UFL1O94874 794 aa16.44■□□□□ 0.22
LMX1B-201ENST00000355497 BIRC2Q13490 618 aa16.44■□□□□ 0.22
LMX1B-201ENST00000355497 KMT5BQ4FZB7 885 aa16.44■□□□□ 0.22
LMX1B-201ENST00000355497 MAST3O60307 1309 aa16.44■□□□□ 0.22
LMX1B-201ENST00000355497 AOX1Q06278 1338 aa16.44■□□□□ 0.22
LMX1B-201ENST00000355497 P4HA1P13674 534 aa16.44■□□□□ 0.22
LMX1B-201ENST00000355497 DNM2P50570 870 aa16.44■□□□□ 0.22
LMX1B-201ENST00000355497 CCDC13Q8IYE1 715 aa16.44■□□□□ 0.22
LMX1B-201ENST00000355497 C17orf53Q8N3J3 647 aaPredicted RBP16.44■□□□□ 0.22
LMX1B-201ENST00000355497 LRRC59Q96AG4 307 aaKnown RBP16.44■□□□□ 0.22
LMX1B-201ENST00000355497 DCAF5Q96JK2 942 aa16.44■□□□□ 0.22
LMX1B-201ENST00000355497 HAUS8Q9BT25 410 aa16.44■□□□□ 0.22
LMX1B-201ENST00000355497 DDX41Q9UJV9 622 aaKnown RBP16.44■□□□□ 0.22
LMX1B-201ENST00000355497 RRAGAQ7L523 313 aa16.43■□□□□ 0.22
LMX1B-201ENST00000355497 RNF168Q8IYW5 571 aaPredicted RBP16.43■□□□□ 0.22
LMX1B-201ENST00000355497 POLR3AO14802 1390 aaPredicted RBP16.43■□□□□ 0.22
LMX1B-201ENST00000355497 EYA2O00167 538 aa16.43■□□□□ 0.22
LMX1B-201ENST00000355497 ITGA6P23229 1130 aa16.43■□□□□ 0.22
LMX1B-201ENST00000355497 WHAMMP3Q1A5X7 153 aa16.43■□□□□ 0.22
LMX1B-201ENST00000355497 CERS3Q8IU89 383 aa16.43■□□□□ 0.22
LMX1B-201ENST00000355497 CTAGE3PQ8IX95 158 aa16.43■□□□□ 0.22
LMX1B-201ENST00000355497 SUDS3Q9H7L9 328 aaPredicted RBP16.43■□□□□ 0.22
LMX1B-201ENST00000355497 SH3BGRP55822 239 aaPredicted RBP16.43■□□□□ 0.22
LMX1B-201ENST00000355497 APPBP2Q92624 585 aa16.43■□□□□ 0.22
LMX1B-201ENST00000355497 CCDC51Q96ER9 411 aa16.43■□□□□ 0.22
LMX1B-201ENST00000355497 LSM14BQ9BX40 385 aaKnown RBP16.43■□□□□ 0.22
LMX1B-201ENST00000355497 RAB20Q9NX57 234 aa16.43■□□□□ 0.22
LMX1B-201ENST00000355497 RLBP1P12271 317 aa16.43■□□□□ 0.22
LMX1B-201ENST00000355497 ARHGAP44Q17R89 818 aa16.43■□□□□ 0.22
LMX1B-201ENST00000355497 NBPF14Q5TI25 921 aa16.43■□□□□ 0.22
LMX1B-201ENST00000355497 BRD3Q15059 726 aa16.43■□□□□ 0.22
LMX1B-201ENST00000355497 PPP2R5BQ15173 497 aa16.43■□□□□ 0.22
LMX1B-201ENST00000355497 DIXDC1Q155Q3 683 aa16.43■□□□□ 0.22
LMX1B-201ENST00000355497 BSPRYQ5W0U4 402 aa16.43■□□□□ 0.22
LMX1B-201ENST00000355497 TACO1Q9BSH4 297 aaKnown RBP16.43■□□□□ 0.22
LMX1B-201ENST00000355497 Q9H521 79 aa16.43■□□□□ 0.22
LMX1B-201ENST00000355497 GINS2Q9Y248 185 aa16.43■□□□□ 0.22
LMX1B-201ENST00000355497 FAN1Q9Y2M0 1017 aa16.43■□□□□ 0.22
LMX1B-201ENST00000355497 SAR1BQ9Y6B6 198 aa16.43■□□□□ 0.22
LMX1B-201ENST00000355497 RBBP5Q15291 538 aaKnown RBP16.42■□□□□ 0.22
LMX1B-201ENST00000355497 HMGB1P1B2RPK0 211 aaPredicted RBP16.42■□□□□ 0.22
LMX1B-201ENST00000355497 ZBED4O75132 1171 aa16.42■□□□□ 0.22
LMX1B-201ENST00000355497 GUCY2FP51841 1108 aa16.42■□□□□ 0.22
LMX1B-201ENST00000355497 GNGT1P63211 74 aa16.42■□□□□ 0.22
LMX1B-201ENST00000355497 NXNQ6DKJ4 435 aa16.42■□□□□ 0.22
LMX1B-201ENST00000355497 U2AF1L4Q8WU68 220 aaKnown RBP16.42■□□□□ 0.22
LMX1B-201ENST00000355497 XAGE2Q96GT9 111 aa16.42■□□□□ 0.22
LMX1B-201ENST00000355497 POLKQ9UBT6 870 aa16.42■□□□□ 0.22
LMX1B-201ENST00000355497 KDM2BQ8NHM5 1336 aa16.42■□□□□ 0.22
LMX1B-201ENST00000355497 PCDH11XQ9BZA7 1347 aa16.42■□□□□ 0.22
LMX1B-201ENST00000355497 PCDH11YQ9BZA8 1340 aa16.42■□□□□ 0.22
LMX1B-201ENST00000355497 BLZF1Q9H2G9 400 aa16.42■□□□□ 0.22
LMX1B-201ENST00000355497 GPAA1O43292 621 aa16.42■□□□□ 0.22
LMX1B-201ENST00000355497 KIF11P52732 1056 aa16.42■□□□□ 0.22
LMX1B-201ENST00000355497 RIC8AQ9NPQ8 531 aa16.42■□□□□ 0.22
LMX1B-201ENST00000355497 RNMTO43148 476 aaKnown RBP16.41■□□□□ 0.22
LMX1B-201ENST00000355497 OPHN1O60890 802 aa16.41■□□□□ 0.22
LMX1B-201ENST00000355497 KRT81Q14533 505 aa16.41■□□□□ 0.22
LMX1B-201ENST00000355497 OTUD7BQ6GQQ9 843 aa16.41■□□□□ 0.22
LMX1B-201ENST00000355497 MAP2K2P36507 400 aa16.41■□□□□ 0.22
LMX1B-201ENST00000355497 FAM207AQ9NSI2 230 aaPredicted RBP16.41■□□□□ 0.22
LMX1B-201ENST00000355497 NESP48681 1621 aa16.41■□□□□ 0.22
LMX1B-201ENST00000355497 CTDSPL2Q05D32 466 aa16.41■□□□□ 0.22
LMX1B-201ENST00000355497 FAM71BQ8TC56 605 aa16.41■□□□□ 0.22
LMX1B-201ENST00000355497 TNRQ92752 1358 aa16.41■□□□□ 0.22
LMX1B-201ENST00000355497 CAPN7Q9Y6W3 813 aa16.41■□□□□ 0.22
LMX1B-201ENST00000355497 RAD51AP2Q09MP3 1159 aa16.41■□□□□ 0.22
LMX1B-201ENST00000355497 KRT40Q6A162 431 aa16.41■□□□□ 0.22
LMX1B-201ENST00000355497 TRIM58Q8NG06 486 aa16.41■□□□□ 0.22
LMX1B-201ENST00000355497 HOMER3Q9NSC5 361 aa16.41■□□□□ 0.22
LMX1B-201ENST00000355497 ZNF445P59923 1031 aa16.41■□□□□ 0.22
LMX1B-201ENST00000355497 ANKFY1Q9P2R3 1169 aa16.41■□□□□ 0.22
LMX1B-201ENST00000355497 HMGXB3Q12766 1538 aa16.4■□□□□ 0.22
LMX1B-201ENST00000355497 DBN1Q16643 649 aa16.4■□□□□ 0.22
LMX1B-201ENST00000355497 SPATS2Q86XZ4 545 aaKnown RBP16.4■□□□□ 0.22
LMX1B-201ENST00000355497 PLEKHA4Q9H4M7 779 aa16.4■□□□□ 0.22
LMX1B-201ENST00000355497 M0QZ92 97 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms