RNA–Protein interactions for RNA: ENST00000341871.7

TMEM220-201, Transcript of transmembrane protein 220, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM220, Length 3,106 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-201ENST00000341871 CAVIN4Q5BKX8 364 aa13.79□□□□□ -0.2
TMEM220-201ENST00000341871 TADA2BQ86TJ2 420 aa13.79□□□□□ -0.2
TMEM220-201ENST00000341871 TXNRD3Q86VQ6 643 aa13.79□□□□□ -0.2
TMEM220-201ENST00000341871 DIS3L2Q8IYB7 885 aaKnown RBP13.79□□□□□ -0.2
TMEM220-201ENST00000341871 IGDCC4Q8TDY8 1250 aa13.79□□□□□ -0.2
TMEM220-201ENST00000341871 ARFGAP3Q9NP61 516 aa13.79□□□□□ -0.2
TMEM220-201ENST00000341871 ADAMTS7Q9UKP4 1686 aa13.79□□□□□ -0.2
TMEM220-201ENST00000341871 FGFR2P21802 821 aa13.79□□□□□ -0.2
TMEM220-201ENST00000341871 NF2P35240 595 aa13.79□□□□□ -0.2
TMEM220-201ENST00000341871 AKAP17AQ02040 695 aaKnown RBP13.79□□□□□ -0.2
TMEM220-201ENST00000341871 NBPF9Q3BBW0 867 aa13.79□□□□□ -0.2
TMEM220-201ENST00000341871 FBXW10Q5XX13 1052 aa13.79□□□□□ -0.2
TMEM220-201ENST00000341871 REXO1L1PQ8IX06 675 aa13.79□□□□□ -0.2
TMEM220-201ENST00000341871 CDC5LQ99459 802 aaKnown RBP13.79□□□□□ -0.2
TMEM220-201ENST00000341871 CABP5Q9NP86 173 aa13.79□□□□□ -0.2
TMEM220-201ENST00000341871 GLI3P10071 1580 aa13.79□□□□□ -0.2
TMEM220-201ENST00000341871 ZMYM6O95789 1325 aa13.79□□□□□ -0.2
TMEM220-201ENST00000341871 USP17L12C9JPN9 530 aa13.79□□□□□ -0.2
TMEM220-201ENST00000341871 USP17L21D6R901 530 aa13.79□□□□□ -0.2
TMEM220-201ENST00000341871 ZPR1O75312 459 aa13.79□□□□□ -0.2
TMEM220-201ENST00000341871 ATP1A3P13637 1013 aa13.79□□□□□ -0.2
TMEM220-201ENST00000341871 N4BP2L2Q92802 583 aaPredicted RBP13.79□□□□□ -0.2
TMEM220-201ENST00000341871 ANO10Q9NW15 660 aa13.79□□□□□ -0.2
TMEM220-201ENST00000341871 IFNKQ9P0W0 207 aa13.79□□□□□ -0.2
TMEM220-201ENST00000341871 UBAP1LF5GYI3 381 aa13.78□□□□□ -0.2
TMEM220-201ENST00000341871 CORO7P57737 925 aa13.78□□□□□ -0.2
TMEM220-201ENST00000341871 PPARAQ07869 468 aa13.78□□□□□ -0.2
TMEM220-201ENST00000341871 AP1ARQ63HQ0 302 aa13.78□□□□□ -0.2
TMEM220-201ENST00000341871 FMR1NBQ8N0W7 255 aaPredicted RBP13.78□□□□□ -0.2
TMEM220-201ENST00000341871 FBXO3Q9UK99 471 aa13.78□□□□□ -0.2
TMEM220-201ENST00000341871 ZNF652Q9Y2D9 606 aa13.78□□□□□ -0.2
TMEM220-201ENST00000341871 ATP2B2Q01814 1243 aa13.78□□□□□ -0.2
TMEM220-201ENST00000341871 ADALQ6DHV7 355 aa13.78□□□□□ -0.2
TMEM220-201ENST00000341871 KLHL10Q6JEL2 608 aa13.78□□□□□ -0.2
TMEM220-201ENST00000341871 TMC6Q7Z403 805 aa13.78□□□□□ -0.2
TMEM220-201ENST00000341871 TRIM22Q8IYM9 498 aa13.78□□□□□ -0.2
TMEM220-201ENST00000341871 CCDC102AQ96A19 550 aa13.78□□□□□ -0.2
TMEM220-201ENST00000341871 SETDB2Q96T68 719 aa13.78□□□□□ -0.2
TMEM220-201ENST00000341871 RTEL1Q9NZ71 1219 aa13.78□□□□□ -0.2
TMEM220-201ENST00000341871 DNAI1Q9UI46 699 aa13.78□□□□□ -0.2
TMEM220-201ENST00000341871 TNKSO95271 1327 aa13.78□□□□□ -0.2
TMEM220-201ENST00000341871 PKD1L3Q7Z443 1732 aa13.78□□□□□ -0.2
TMEM220-201ENST00000341871 SAFBQ15424 915 aaKnown RBP eCLIP13.77□□□□□ -0.2
TMEM220-201ENST00000341871 EFCAB13Q8IY85 973 aa13.77□□□□□ -0.2
TMEM220-201ENST00000341871 TRMT44Q8IYL2 757 aaKnown RBP13.77□□□□□ -0.2
TMEM220-201ENST00000341871 KCNG4Q8TDN1 519 aa13.77□□□□□ -0.2
TMEM220-201ENST00000341871 V9GY48 417 aaPredicted RBP13.77□□□□□ -0.2
TMEM220-201ENST00000341871 CDKL5O76039 1030 aa13.77□□□□□ -0.21
TMEM220-201ENST00000341871 USP49Q70CQ1 688 aa13.77□□□□□ -0.21
TMEM220-201ENST00000341871 JMYQ8N9B5 988 aa13.77□□□□□ -0.21
TMEM220-201ENST00000341871 CNNM3Q8NE01 707 aa13.77□□□□□ -0.21
TMEM220-201ENST00000341871 ENGASEQ8NFI3 743 aa13.77□□□□□ -0.21
TMEM220-201ENST00000341871 FAM217BQ9NTX9 383 aaPredicted RBP13.77□□□□□ -0.21
TMEM220-201ENST00000341871 MINPP1Q9UNW1 487 aa13.77□□□□□ -0.21
TMEM220-201ENST00000341871 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.77□□□□□ -0.21
TMEM220-201ENST00000341871 PLEKHA8P1O95397 391 aa13.77□□□□□ -0.21
TMEM220-201ENST00000341871 AFMP43652 599 aa13.77□□□□□ -0.21
TMEM220-201ENST00000341871 CENPHQ9H3R5 247 aa13.77□□□□□ -0.21
TMEM220-201ENST00000341871 SASH3O75995 380 aa13.76□□□□□ -0.21
TMEM220-201ENST00000341871 IQCB1Q15051 598 aa13.76□□□□□ -0.21
TMEM220-201ENST00000341871 HSP90B2PQ58FF3 399 aa13.76□□□□□ -0.21
TMEM220-201ENST00000341871 NBPF11Q86T75 865 aa13.76□□□□□ -0.21
TMEM220-201ENST00000341871 LRRC8AQ8IWT6 810 aa13.76□□□□□ -0.21
TMEM220-201ENST00000341871 DHX40Q8IX18 779 aaKnown RBP13.76□□□□□ -0.21
TMEM220-201ENST00000341871 ZNF654Q8IZM8 581 aa13.76□□□□□ -0.21
TMEM220-201ENST00000341871 CARD6Q9BX69 1037 aa13.76□□□□□ -0.21
TMEM220-201ENST00000341871 VEZTQ9HBM0 779 aa13.76□□□□□ -0.21
TMEM220-201ENST00000341871 GNL3LQ9NVN8 582 aaKnown RBP13.76□□□□□ -0.21
TMEM220-201ENST00000341871 KIAA1468Q9P260 1216 aa13.76□□□□□ -0.21
TMEM220-201ENST00000341871 PCDHB6Q9Y5E3 794 aa13.76□□□□□ -0.21
TMEM220-201ENST00000341871 PEX19P40855 299 aa13.76□□□□□ -0.21
TMEM220-201ENST00000341871 DIXDC1Q155Q3 683 aa13.76□□□□□ -0.21
TMEM220-201ENST00000341871 LONRF3Q496Y0 759 aa13.76□□□□□ -0.21
TMEM220-201ENST00000341871 ARMC3Q5W041 872 aa13.76□□□□□ -0.21
TMEM220-201ENST00000341871 SHC4Q6S5L8 630 aa13.76□□□□□ -0.21
TMEM220-201ENST00000341871 CTCFLQ8NI51 663 aaPredicted RBP13.76□□□□□ -0.21
TMEM220-201ENST00000341871 PSMD1Q99460 953 aa13.76□□□□□ -0.21
TMEM220-201ENST00000341871 SAP30BPQ9UHR5 308 aaKnown RBP13.76□□□□□ -0.21
TMEM220-201ENST00000341871 CCNL1Q9UK58 526 aaPredicted RBP13.76□□□□□ -0.21
TMEM220-201ENST00000341871 SERPINC1P01008 464 aa13.75□□□□□ -0.21
TMEM220-201ENST00000341871 HNRNPH1P31943 449 aaKnown RBP13.75□□□□□ -0.21
TMEM220-201ENST00000341871 EVCP57679 992 aa13.75□□□□□ -0.21
TMEM220-201ENST00000341871 PARP10Q53GL7 1025 aa13.75□□□□□ -0.21
TMEM220-201ENST00000341871 NLRP3Q96P20 1036 aa13.75□□□□□ -0.21
TMEM220-201ENST00000341871 XPO4Q9C0E2 1151 aaKnown RBP13.75□□□□□ -0.21
TMEM220-201ENST00000341871 CPVLQ9H3G5 476 aa13.75□□□□□ -0.21
TMEM220-201ENST00000341871 RABEP2Q9H5N1 569 aa13.75□□□□□ -0.21
TMEM220-201ENST00000341871 ZSWIM4Q9H7M6 989 aa13.75□□□□□ -0.21
TMEM220-201ENST00000341871 TOGARAM1Q9Y4F4 1720 aa13.75□□□□□ -0.21
TMEM220-201ENST00000341871 TTC36A6NLP5 189 aa13.75□□□□□ -0.21
TMEM220-201ENST00000341871 POLR2DO15514 142 aaKnown RBP13.75□□□□□ -0.21
TMEM220-201ENST00000341871 IFIT1BQ5T764 474 aaKnown RBP13.75□□□□□ -0.21
TMEM220-201ENST00000341871 TDRD7Q8NHU6 1098 aaKnown RBP13.75□□□□□ -0.21
TMEM220-201ENST00000341871 FAM84BQ96KN1 310 aaPredicted RBP13.75□□□□□ -0.21
TMEM220-201ENST00000341871 NUCKS1Q9H1E3 243 aaKnown RBP13.75□□□□□ -0.21
TMEM220-201ENST00000341871 PARP4Q9UKK3 1724 aaKnown RBP13.75□□□□□ -0.21
TMEM220-201ENST00000341871 A0A087WUV0 522 aaPredicted RBP13.75□□□□□ -0.21
TMEM220-201ENST00000341871 CDC25AP30304 524 aa13.75□□□□□ -0.21
TMEM220-201ENST00000341871 CFAP100Q494V2 611 aa13.75□□□□□ -0.21
TMEM220-201ENST00000341871 TMEM87BQ96K49 555 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms