RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 FOXN1O15353 648 aa7.86□□□□□ -1.15
SMG1-201ENST00000330588 IGSF3O75054 1194 aa7.86□□□□□ -1.15
SMG1-201ENST00000330588 PTSQ03393 145 aa7.86□□□□□ -1.15
SMG1-201ENST00000330588 TNFAIP1Q13829 316 aa7.86□□□□□ -1.15
SMG1-201ENST00000330588 NBPF9Q3BBW0 867 aa7.86□□□□□ -1.15
SMG1-201ENST00000330588 MFSD14BQ5SR56 506 aa7.86□□□□□ -1.15
SMG1-201ENST00000330588 CYP4F22Q6NT55 531 aa7.86□□□□□ -1.15
SMG1-201ENST00000330588 KIAA0825Q8IV33 1275 aa7.86□□□□□ -1.15
SMG1-201ENST00000330588 GPR161Q8N6U8 529 aaKnown RBP7.86□□□□□ -1.15
SMG1-201ENST00000330588 BANK1Q8NDB2 785 aa7.86□□□□□ -1.15
SMG1-201ENST00000330588 NANOS1Q8WY41 292 aaKnown RBP7.86□□□□□ -1.15
SMG1-201ENST00000330588 MEIS3Q99687 375 aa7.86□□□□□ -1.15
SMG1-201ENST00000330588 CEP126Q9P2H0 1117 aa7.86□□□□□ -1.15
SMG1-201ENST00000330588 GPSM3Q9Y4H4 160 aa7.86□□□□□ -1.15
SMG1-201ENST00000330588 LRRFIP2Q9Y608 721 aaKnown RBP7.86□□□□□ -1.15
SMG1-201ENST00000330588 MYH13Q9UKX3 1938 aa7.86□□□□□ -1.15
SMG1-201ENST00000330588 SALL1Q9NSC2 1324 aa7.86□□□□□ -1.15
SMG1-201ENST00000330588 FAM155AB1AL88 458 aaPredicted RBP7.85□□□□□ -1.15
SMG1-201ENST00000330588 PLIN1O60240 522 aa7.85□□□□□ -1.15
SMG1-201ENST00000330588 GYG1P46976 350 aa7.85□□□□□ -1.15
SMG1-201ENST00000330588 NR6A1Q15406 480 aa7.85□□□□□ -1.15
SMG1-201ENST00000330588 TMEM259Q4ZIN3 620 aa7.85□□□□□ -1.15
SMG1-201ENST00000330588 FKBP1CQ5VVH2 108 aa7.85□□□□□ -1.15
SMG1-201ENST00000330588 VPS37DQ86XT2 251 aa7.85□□□□□ -1.15
SMG1-201ENST00000330588 WDR66Q8TBY9 1149 aa7.85□□□□□ -1.15
SMG1-201ENST00000330588 SLC10A4Q96EP9 437 aa7.85□□□□□ -1.15
SMG1-201ENST00000330588 AKAP2Q9Y2D5 859 aa7.85□□□□□ -1.15
SMG1-201ENST00000330588 ASTN2O75129 1339 aaPredicted RBP7.85□□□□□ -1.15
SMG1-201ENST00000330588 RPAP1Q9BWH6 1393 aaPredicted RBP7.85□□□□□ -1.15
SMG1-201ENST00000330588 AP1G2O75843 785 aa7.84□□□□□ -1.15
SMG1-201ENST00000330588 GNAI2P04899 355 aa7.84□□□□□ -1.15
SMG1-201ENST00000330588 HSPA8P11142 646 aaKnown RBP7.84□□□□□ -1.15
SMG1-201ENST00000330588 DHX9Q08211 1270 aaKnown RBP7.84□□□□□ -1.15
SMG1-201ENST00000330588 CFAP100Q494V2 611 aa7.84□□□□□ -1.15
SMG1-201ENST00000330588 INTS6LQ5JSJ4 861 aaKnown RBP7.84□□□□□ -1.15
SMG1-201ENST00000330588 HHIPL2Q6UWX4 724 aa7.84□□□□□ -1.15
SMG1-201ENST00000330588 ARMC9Q7Z3E5 817 aa7.84□□□□□ -1.15
SMG1-201ENST00000330588 CLUAP1Q96AJ1 413 aa7.84□□□□□ -1.15
SMG1-201ENST00000330588 POM121Q96HA1 1249 aa7.84□□□□□ -1.15
SMG1-201ENST00000330588 MXD3Q9BW11 206 aa7.84□□□□□ -1.15
SMG1-201ENST00000330588 ZNF408Q9H9D4 720 aa7.84□□□□□ -1.15
SMG1-201ENST00000330588 GNL3LQ9NVN8 582 aaKnown RBP7.84□□□□□ -1.15
SMG1-201ENST00000330588 BCAR3O75815 825 aa7.84□□□□□ -1.15
SMG1-201ENST00000330588 GSK3AP49840 483 aa7.84□□□□□ -1.15
SMG1-201ENST00000330588 ATP2B3Q16720 1220 aa7.84□□□□□ -1.15
SMG1-201ENST00000330588 SUPT20HL1Q3ZLR7 823 aa7.84□□□□□ -1.15
SMG1-201ENST00000330588 NOM1Q5C9Z4 860 aaKnown RBP7.84□□□□□ -1.15
SMG1-201ENST00000330588 LDLRAD1Q5T700 205 aa7.84□□□□□ -1.15
SMG1-201ENST00000330588 ZGPATQ8N5A5 531 aaKnown RBP7.84□□□□□ -1.15
SMG1-201ENST00000330588 TEKT1Q969V4 418 aa7.84□□□□□ -1.15
SMG1-201ENST00000330588 ZDHHC15Q96MV8 337 aa7.84□□□□□ -1.15
SMG1-201ENST00000330588 DENND2AQ9ULE3 1009 aa7.84□□□□□ -1.15
SMG1-201ENST00000330588 SLC35F4A4IF30 521 aa7.83□□□□□ -1.16
SMG1-201ENST00000330588 TNNI2P48788 182 aa7.83□□□□□ -1.16
SMG1-201ENST00000330588 ZNF157P51786 506 aaPredicted RBP7.83□□□□□ -1.16
SMG1-201ENST00000330588 PTK2Q05397 1052 aa7.83□□□□□ -1.16
SMG1-201ENST00000330588 KCNMA1Q12791 1236 aa7.83□□□□□ -1.16
SMG1-201ENST00000330588 COL13A1Q5TAT6 717 aaPredicted RBP7.83□□□□□ -1.16
SMG1-201ENST00000330588 ZBTB33Q86T24 672 aa7.83□□□□□ -1.16
SMG1-201ENST00000330588 FAM83AQ86UY5 434 aa7.83□□□□□ -1.16
SMG1-201ENST00000330588 RASAL3Q86YV0 1011 aa7.83□□□□□ -1.16
SMG1-201ENST00000330588 DZIP1LQ8IYY4 767 aaKnown RBP7.83□□□□□ -1.16
SMG1-201ENST00000330588 KLHDC4Q8TBB5 520 aa7.83□□□□□ -1.16
SMG1-201ENST00000330588 HOOK2Q96ED9 719 aa7.83□□□□□ -1.16
SMG1-201ENST00000330588 PRMT6Q96LA8 375 aaPredicted RBP7.83□□□□□ -1.16
SMG1-201ENST00000330588 CFHR5Q9BXR6 569 aa7.83□□□□□ -1.16
SMG1-201ENST00000330588 ZMYND15Q9H091 742 aa7.83□□□□□ -1.16
SMG1-201ENST00000330588 DEFB129Q9H1M3 183 aa7.83□□□□□ -1.16
SMG1-201ENST00000330588 HMX1Q9NP08 348 aaPredicted RBP7.83□□□□□ -1.16
SMG1-201ENST00000330588 GPR108Q9NPR9 543 aa7.83□□□□□ -1.16
SMG1-201ENST00000330588 TTF2Q9UNY4 1162 aaKnown RBP7.83□□□□□ -1.16
SMG1-201ENST00000330588 FIGNL2A6NMB9 653 aa7.82□□□□□ -1.16
SMG1-201ENST00000330588 SRGAP3O43295 1099 aa7.82□□□□□ -1.16
SMG1-201ENST00000330588 PPP1R12BO60237 982 aaPredicted RBP7.82□□□□□ -1.16
SMG1-201ENST00000330588 AOC2O75106 756 aa7.82□□□□□ -1.16
SMG1-201ENST00000330588 FRAT2O75474 233 aaPredicted RBP7.82□□□□□ -1.16
SMG1-201ENST00000330588 MAP4K4O95819 1239 aaPredicted RBP7.82□□□□□ -1.16
SMG1-201ENST00000330588 ZBTB48P10074 688 aaPredicted RBP7.82□□□□□ -1.16
SMG1-201ENST00000330588 CRKP46108 304 aa7.82□□□□□ -1.16
SMG1-201ENST00000330588 INHBEP58166 350 aa7.82□□□□□ -1.16
SMG1-201ENST00000330588 MVPQ14764 893 aaKnown RBP7.82□□□□□ -1.16
SMG1-201ENST00000330588 TNS4Q8IZW8 715 aa7.82□□□□□ -1.16
SMG1-201ENST00000330588 CCDC155Q8N6L0 562 aa7.82□□□□□ -1.16
SMG1-201ENST00000330588 SSH3Q8TE77 659 aa7.82□□□□□ -1.16
SMG1-201ENST00000330588 FRAT1Q92837 279 aaPredicted RBP7.82□□□□□ -1.16
SMG1-201ENST00000330588 CHMP4BQ9H444 224 aaKnown RBP7.82□□□□□ -1.16
SMG1-201ENST00000330588 ZNF70Q9UC06 446 aaPredicted RBP7.82□□□□□ -1.16
SMG1-201ENST00000330588 SSC5DA1L4H1 1573 aa7.82□□□□□ -1.16
SMG1-201ENST00000330588 AKAP11Q9UKA4 1901 aa7.82□□□□□ -1.16
SMG1-201ENST00000330588 IREB2P48200 963 aaKnown RBP7.81□□□□□ -1.16
SMG1-201ENST00000330588 TM4SF4P48230 202 aa7.81□□□□□ -1.16
SMG1-201ENST00000330588 ATP8B2P98198 1209 aa7.81□□□□□ -1.16
SMG1-201ENST00000330588 SREBF2Q12772 1141 aa7.81□□□□□ -1.16
SMG1-201ENST00000330588 TMED8Q6PL24 325 aaPredicted RBP7.81□□□□□ -1.16
SMG1-201ENST00000330588 FTSJ3Q8IY81 847 aaKnown RBP7.81□□□□□ -1.16
SMG1-201ENST00000330588 TMEM57Q8N5G2 664 aa7.81□□□□□ -1.16
SMG1-201ENST00000330588 ADAM32Q8TC27 787 aa7.81□□□□□ -1.16
SMG1-201ENST00000330588 TMOD2Q9NZR1 351 aa7.81□□□□□ -1.16
SMG1-201ENST00000330588 NOP58Q9Y2X3 529 aaKnown RBP7.81□□□□□ -1.16
SMG1-201ENST00000330588 ZBTB7BO15156 539 aaPredicted RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms