RNA–Protein interactions for RNA: ENST00000316738.11

EFCAB11-201, Transcript of EF-hand calcium binding domain 11, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EFCAB11, Length 3,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-201ENST00000316738 CCDC178Q5BJE1 867 aa12.7□□□□□ -0.38
EFCAB11-201ENST00000316738 AP5Z1O43299 807 aa12.7□□□□□ -0.38
EFCAB11-201ENST00000316738 SLC15A2Q16348 729 aa12.7□□□□□ -0.38
EFCAB11-201ENST00000316738 POTEAQ6S8J7 498 aa12.7□□□□□ -0.38
EFCAB11-201ENST00000316738 MAPKAPK5Q8IW41 473 aa12.7□□□□□ -0.38
EFCAB11-201ENST00000316738 TNFRSF25Q93038 417 aa12.7□□□□□ -0.38
EFCAB11-201ENST00000316738 ESPNB1AK53 854 aa12.7□□□□□ -0.38
EFCAB11-201ENST00000316738 CAVIN2O95810 425 aa12.7□□□□□ -0.38
EFCAB11-201ENST00000316738 DPP8Q6V1X1 898 aaPredicted RBP12.7□□□□□ -0.38
EFCAB11-201ENST00000316738 CCDC82Q8N4S0 544 aa12.7□□□□□ -0.38
EFCAB11-201ENST00000316738 TRIM44Q96DX7 344 aaPredicted RBP12.7□□□□□ -0.38
EFCAB11-201ENST00000316738 GREB1LQ9C091 1923 aaPredicted RBP12.69□□□□□ -0.38
EFCAB11-201ENST00000316738 A0A1B0GVL5 298 aa12.69□□□□□ -0.38
EFCAB11-201ENST00000316738 TMEM132AQ24JP5 1023 aa12.69□□□□□ -0.38
EFCAB11-201ENST00000316738 TEX11Q8IYF3 940 aa12.69□□□□□ -0.38
EFCAB11-201ENST00000316738 OXER1Q8TDS5 423 aa12.69□□□□□ -0.38
EFCAB11-201ENST00000316738 C7orf43Q8WVR3 580 aa12.69□□□□□ -0.38
EFCAB11-201ENST00000316738 ZC3H12CQ9C0D7 883 aaKnown RBP12.69□□□□□ -0.38
EFCAB11-201ENST00000316738 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.69□□□□□ -0.38
EFCAB11-201ENST00000316738 V9GY48 417 aaPredicted RBP12.69□□□□□ -0.38
EFCAB11-201ENST00000316738 SCN9AQ15858 1988 aa12.69□□□□□ -0.38
EFCAB11-201ENST00000316738 RIMBP2O15034 1052 aa12.69□□□□□ -0.38
EFCAB11-201ENST00000316738 FKBP1AP62942 108 aaKnown RBP12.69□□□□□ -0.38
EFCAB11-201ENST00000316738 SAFBQ15424 915 aaKnown RBP eCLIP12.69□□□□□ -0.38
EFCAB11-201ENST00000316738 ANO6Q4KMQ2 910 aa12.69□□□□□ -0.38
EFCAB11-201ENST00000316738 RILPL1Q5EBL4 403 aa12.69□□□□□ -0.38
EFCAB11-201ENST00000316738 RESP18Q5W5W9 173 aa12.69□□□□□ -0.38
EFCAB11-201ENST00000316738 SHC4Q6S5L8 630 aa12.69□□□□□ -0.38
EFCAB11-201ENST00000316738 AMOTL1Q8IY63 956 aa12.69□□□□□ -0.38
EFCAB11-201ENST00000316738 TIGD1Q96MW7 591 aa12.69□□□□□ -0.38
EFCAB11-201ENST00000316738 PLIN4Q96Q06 1357 aa12.69□□□□□ -0.38
EFCAB11-201ENST00000316738 C10orf71Q711Q0 1435 aa12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 NR5A1Q13285 461 aa12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 GRM4Q14833 912 aa12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 KINO60870 393 aaKnown RBP12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 PFKFB1P16118 471 aa12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 CDK8P49336 464 aa12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 GABPAQ06546 454 aa12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 PFKFB3Q16875 520 aaPredicted RBP12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 MSL1Q68DK7 614 aa12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 SASS6Q6UVJ0 657 aa12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 SLC44A5Q8NCS7 719 aa12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 CTCFLQ8NI51 663 aaPredicted RBP12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 MRIQ9BWK5 157 aa12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 CBX8Q9HC52 389 aa12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 USP25Q9UHP3 1055 aa12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 MAD2L2Q9UI95 211 aa12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 NOL7Q9UMY1 257 aaKnown RBP12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 PSME4Q14997 1843 aa12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 CUTAO60888 179 aa12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 CLCN1P35523 988 aa12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 EZH2Q15910 746 aaKnown RBP12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 HHIPL2Q6UWX4 724 aa12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 C2CD5Q86YS7 1000 aa12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 JMYQ8N9B5 988 aa12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 NEDD1Q8NHV4 660 aa12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 MKNK2Q9HBH9 465 aa12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 ZNF287Q9HBT7 754 aa12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 SAP30BPQ9UHR5 308 aaKnown RBP12.68□□□□□ -0.38
EFCAB11-201ENST00000316738 SIPA1L1O43166 1804 aa12.67□□□□□ -0.38
EFCAB11-201ENST00000316738 USP17L3A6NCW0 530 aa12.67□□□□□ -0.38
EFCAB11-201ENST00000316738 USP17L4A6NCW7 530 aa12.67□□□□□ -0.38
EFCAB11-201ENST00000316738 GNL2Q13823 731 aaKnown RBP12.67□□□□□ -0.38
EFCAB11-201ENST00000316738 IQCB1Q15051 598 aa12.67□□□□□ -0.38
EFCAB11-201ENST00000316738 USP17L1Q7RTZ2 530 aa12.67□□□□□ -0.38
EFCAB11-201ENST00000316738 PODNQ7Z5L7 613 aa12.67□□□□□ -0.38
EFCAB11-201ENST00000316738 ELOA2Q8IYF1 753 aaPredicted RBP12.67□□□□□ -0.38
EFCAB11-201ENST00000316738 PNMA1Q8ND90 353 aa12.67□□□□□ -0.38
EFCAB11-201ENST00000316738 EYA3Q99504 573 aa12.67□□□□□ -0.38
EFCAB11-201ENST00000316738 VPS54Q9P1Q0 977 aa12.67□□□□□ -0.38
EFCAB11-201ENST00000316738 MYH8P13535 1937 aa12.67□□□□□ -0.38
EFCAB11-201ENST00000316738 UTRNP46939 3433 aa12.67□□□□□ -0.38
EFCAB11-201ENST00000316738 ZNF202O95125 648 aa12.67□□□□□ -0.38
EFCAB11-201ENST00000316738 XBP1P17861 261 aa12.67□□□□□ -0.38
EFCAB11-201ENST00000316738 MARCKSP29966 332 aaPredicted RBP12.67□□□□□ -0.38
EFCAB11-201ENST00000316738 SLC35G1Q2M3R5 365 aa12.67□□□□□ -0.38
EFCAB11-201ENST00000316738 SLC4A8Q2Y0W8 1093 aa12.67□□□□□ -0.38
EFCAB11-201ENST00000316738 ZSCAN30Q86W11 494 aa12.67□□□□□ -0.38
EFCAB11-201ENST00000316738 ZNF444Q8N0Y2 327 aaPredicted RBP12.67□□□□□ -0.38
EFCAB11-201ENST00000316738 KAT14Q9H8E8 782 aa12.67□□□□□ -0.38
EFCAB11-201ENST00000316738 FBXO2Q9UK22 296 aaPredicted RBP12.67□□□□□ -0.38
EFCAB11-201ENST00000316738 ADCY5O95622 1261 aa12.66□□□□□ -0.38
EFCAB11-201ENST00000316738 TSPY3P0CV98 308 aa12.66□□□□□ -0.38
EFCAB11-201ENST00000316738 TSPY8P0CW00 308 aa12.66□□□□□ -0.38
EFCAB11-201ENST00000316738 PTPREP23469 700 aa12.66□□□□□ -0.38
EFCAB11-201ENST00000316738 KIF5BP33176 963 aa12.66□□□□□ -0.38
EFCAB11-201ENST00000316738 AKAP17AQ02040 695 aaKnown RBP12.66□□□□□ -0.38
EFCAB11-201ENST00000316738 ZNF579Q8NAF0 562 aaKnown RBP12.66□□□□□ -0.38
EFCAB11-201ENST00000316738 KIF13BQ9NQT8 1826 aa12.66□□□□□ -0.38
EFCAB11-201ENST00000316738 PALM3A6NDB9 673 aaPredicted RBP12.66□□□□□ -0.38
EFCAB11-201ENST00000316738 H0YIN7 160 aa12.66□□□□□ -0.38
EFCAB11-201ENST00000316738 SCG2P13521 617 aa12.66□□□□□ -0.38
EFCAB11-201ENST00000316738 KRT2P35908 639 aa12.66□□□□□ -0.38
EFCAB11-201ENST00000316738 DOK7Q18PE1 504 aa12.66□□□□□ -0.38
EFCAB11-201ENST00000316738 EARS2Q5JPH6 523 aaKnown RBP12.66□□□□□ -0.38
EFCAB11-201ENST00000316738 HOMEZQ8IX15 550 aa12.66□□□□□ -0.38
EFCAB11-201ENST00000316738 TMEM47Q9BQJ4 181 aa12.66□□□□□ -0.38
EFCAB11-201ENST00000316738 SH3GLB2Q9NR46 395 aa12.66□□□□□ -0.38
EFCAB11-201ENST00000316738 CCDC39Q9UFE4 941 aa12.66□□□□□ -0.38
EFCAB11-201ENST00000316738 PCDHB6Q9Y5E3 794 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms