RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 GUCY1A2P33402 732 aa20.47■□□□□ 0.87
HMGCLL1-202ENST00000308161 MTFR1Q15390 333 aa20.47■□□□□ 0.87
HMGCLL1-202ENST00000308161 APPBP2Q92624 585 aa20.47■□□□□ 0.87
HMGCLL1-202ENST00000308161 PAGR1Q9BTK6 254 aa20.47■□□□□ 0.87
HMGCLL1-202ENST00000308161 SWAP70Q9UH65 585 aa20.47■□□□□ 0.87
HMGCLL1-202ENST00000308161 ELNP15502 786 aa20.46■□□□□ 0.87
HMGCLL1-202ENST00000308161 USP14P54578 494 aa20.46■□□□□ 0.87
HMGCLL1-202ENST00000308161 C12orf60Q5U649 245 aa20.46■□□□□ 0.87
HMGCLL1-202ENST00000308161 STK11IPQ8N1F8 1099 aa20.46■□□□□ 0.87
HMGCLL1-202ENST00000308161 PI4K2BQ8TCG2 481 aa20.46■□□□□ 0.87
HMGCLL1-202ENST00000308161 OSBP2Q969R2 916 aa20.46■□□□□ 0.87
HMGCLL1-202ENST00000308161 STRBPQ96SI9 672 aaKnown RBP20.46■□□□□ 0.87
HMGCLL1-202ENST00000308161 FSD1Q9BTV5 496 aa20.46■□□□□ 0.87
HMGCLL1-202ENST00000308161 ADCY3O60266 1144 aa20.45■□□□□ 0.86
HMGCLL1-202ENST00000308161 AKR1B1P15121 316 aa20.45■□□□□ 0.86
HMGCLL1-202ENST00000308161 CLEC10AQ8IUN9 316 aa20.45■□□□□ 0.86
HMGCLL1-202ENST00000308161 SLAIN1Q8ND83 568 aa20.45■□□□□ 0.86
HMGCLL1-202ENST00000308161 KIAA1683Q9H0B3 1180 aa20.45■□□□□ 0.86
HMGCLL1-202ENST00000308161 MKI67P46013 3256 aaKnown RBP20.44■□□□□ 0.86
HMGCLL1-202ENST00000308161 M0R2C6 588 aa20.44■□□□□ 0.86
HMGCLL1-202ENST00000308161 ZFYP08048 801 aaPredicted RBP20.44■□□□□ 0.86
HMGCLL1-202ENST00000308161 VCAM1P19320 739 aa20.44■□□□□ 0.86
HMGCLL1-202ENST00000308161 CDK8P49336 464 aa20.44■□□□□ 0.86
HMGCLL1-202ENST00000308161 UBXN2AP68543 259 aa20.44■□□□□ 0.86
HMGCLL1-202ENST00000308161 HDAC1Q13547 482 aaPredicted RBP20.44■□□□□ 0.86
HMGCLL1-202ENST00000308161 LRRFIP1Q32MZ4 808 aaKnown RBP20.44■□□□□ 0.86
HMGCLL1-202ENST00000308161 CTR9Q6PD62 1173 aa20.44■□□□□ 0.86
HMGCLL1-202ENST00000308161 TMEM179Q6ZVK1 233 aa20.44■□□□□ 0.86
HMGCLL1-202ENST00000308161 CCAR1Q8IX12 1150 aaKnown RBP20.44■□□□□ 0.86
HMGCLL1-202ENST00000308161 GCC1Q96CN9 775 aa20.44■□□□□ 0.86
HMGCLL1-202ENST00000308161 C12orf42Q96LP6 360 aa20.44■□□□□ 0.86
HMGCLL1-202ENST00000308161 TXNRD2Q9NNW7 524 aa20.44■□□□□ 0.86
HMGCLL1-202ENST00000308161 MORF4L1Q9UBU8 362 aa20.44■□□□□ 0.86
HMGCLL1-202ENST00000308161 PDE4DIPQ5VU43 2346 aa20.44■□□□□ 0.86
HMGCLL1-202ENST00000308161 USP17L15C9J2P7 530 aa20.43■□□□□ 0.86
HMGCLL1-202ENST00000308161 USP17L13C9JLJ4 530 aa20.43■□□□□ 0.86
HMGCLL1-202ENST00000308161 USP17L11C9JVI0 530 aa20.43■□□□□ 0.86
HMGCLL1-202ENST00000308161 USP17L18D6R9N7 530 aa20.43■□□□□ 0.86
HMGCLL1-202ENST00000308161 USP17L22D6RA61 530 aa20.43■□□□□ 0.86
HMGCLL1-202ENST00000308161 USP17L17D6RBQ6 530 aa20.43■□□□□ 0.86
HMGCLL1-202ENST00000308161 USP17L19D6RCP7 530 aa20.43■□□□□ 0.86
HMGCLL1-202ENST00000308161 USP17L20D6RJB6 530 aa20.43■□□□□ 0.86
HMGCLL1-202ENST00000308161 GPAA1O43292 621 aa20.43■□□□□ 0.86
HMGCLL1-202ENST00000308161 APPP05067 770 aa20.43■□□□□ 0.86
HMGCLL1-202ENST00000308161 USP17L24Q0WX57 530 aa20.43■□□□□ 0.86
HMGCLL1-202ENST00000308161 GPRC5AQ8NFJ5 357 aa20.43■□□□□ 0.86
HMGCLL1-202ENST00000308161 ARPP21Q9UBL0 812 aaPredicted RBP20.43■□□□□ 0.86
HMGCLL1-202ENST00000308161 MYH8P13535 1937 aa20.43■□□□□ 0.86
HMGCLL1-202ENST00000308161 RBBP6Q7Z6E9 1792 aaKnown RBP20.43■□□□□ 0.86
HMGCLL1-202ENST00000308161 A0A1W2PRG0 241 aa20.42■□□□□ 0.86
HMGCLL1-202ENST00000308161 MINDY4BA8MYZ0 360 aa20.42■□□□□ 0.86
HMGCLL1-202ENST00000308161 CCL5P13501 91 aa20.42■□□□□ 0.86
HMGCLL1-202ENST00000308161 ATP2B2Q01814 1243 aa20.42■□□□□ 0.86
HMGCLL1-202ENST00000308161 ICA1Q05084 483 aa20.42■□□□□ 0.86
HMGCLL1-202ENST00000308161 C16orf86Q6ZW13 317 aa20.42■□□□□ 0.86
HMGCLL1-202ENST00000308161 EXOC6Q8TAG9 804 aa20.42■□□□□ 0.86
HMGCLL1-202ENST00000308161 RNF208Q9H0X6 261 aa20.42■□□□□ 0.86
HMGCLL1-202ENST00000308161 RPAP3Q9H6T3 665 aaPredicted RBP20.42■□□□□ 0.86
HMGCLL1-202ENST00000308161 CWC22Q9HCG8 908 aaKnown RBP20.42■□□□□ 0.86
HMGCLL1-202ENST00000308161 RBPJLQ9UBG7 517 aa20.42■□□□□ 0.86
HMGCLL1-202ENST00000308161 GSG1L2A8MUP6 293 aa20.41■□□□□ 0.86
HMGCLL1-202ENST00000308161 INHAP05111 366 aa20.41■□□□□ 0.86
HMGCLL1-202ENST00000308161 TDO2P48775 406 aa20.41■□□□□ 0.86
HMGCLL1-202ENST00000308161 ERVK-9P63128 1117 aa20.41■□□□□ 0.86
HMGCLL1-202ENST00000308161 ERVK-24P63145 666 aa20.41■□□□□ 0.86
HMGCLL1-202ENST00000308161 B4GALNT3Q6L9W6 998 aa20.41■□□□□ 0.86
HMGCLL1-202ENST00000308161 SEC62Q99442 399 aaKnown RBP20.41■□□□□ 0.86
HMGCLL1-202ENST00000308161 IRF5Q13568 498 aa20.4■□□□□ 0.86
HMGCLL1-202ENST00000308161 CATSPERGQ6ZRH7 1159 aa20.4■□□□□ 0.86
HMGCLL1-202ENST00000308161 GTF3C2Q8WUA4 911 aaPredicted RBP20.4■□□□□ 0.86
HMGCLL1-202ENST00000308161 CCDC17Q96LX7 622 aa20.4■□□□□ 0.86
HMGCLL1-202ENST00000308161 TANGO6Q9C0B7 1094 aa20.4■□□□□ 0.86
HMGCLL1-202ENST00000308161 LNPKQ9C0E8 428 aa20.4■□□□□ 0.86
HMGCLL1-202ENST00000308161 ARHGEF10LQ9HCE6 1279 aa20.4■□□□□ 0.86
HMGCLL1-202ENST00000308161 DOCK3Q8IZD9 2030 aa20.39■□□□□ 0.86
HMGCLL1-202ENST00000308161 Q3C1V9 767 aa20.39■□□□□ 0.85
HMGCLL1-202ENST00000308161 WDR78Q5VTH9 848 aa20.39■□□□□ 0.85
HMGCLL1-202ENST00000308161 SAMD1Q6SPF0 538 aaPredicted RBP20.39■□□□□ 0.85
HMGCLL1-202ENST00000308161 SPICE1Q8N0Z3 855 aa20.39■□□□□ 0.85
HMGCLL1-202ENST00000308161 UNC93B1Q9H1C4 597 aa20.39■□□□□ 0.85
HMGCLL1-202ENST00000308161 PORCNQ9H237 461 aa20.39■□□□□ 0.85
HMGCLL1-202ENST00000308161 RWDD1Q9H446 243 aaPredicted RBP20.39■□□□□ 0.85
HMGCLL1-202ENST00000308161 EPB41L4AQ9HCS5 686 aaPredicted RBP20.39■□□□□ 0.85
HMGCLL1-202ENST00000308161 SUPT16HQ9Y5B9 1047 aaKnown RBP20.39■□□□□ 0.85
HMGCLL1-202ENST00000308161 SALL3Q9BXA9 1300 aa20.39■□□□□ 0.85
HMGCLL1-202ENST00000308161 RAD21O60216 631 aa20.38■□□□□ 0.85
HMGCLL1-202ENST00000308161 GNAT2P19087 354 aa20.38■□□□□ 0.85
HMGCLL1-202ENST00000308161 CYP2B6P20813 491 aa20.38■□□□□ 0.85
HMGCLL1-202ENST00000308161 AAMPQ13685 434 aa20.38■□□□□ 0.85
HMGCLL1-202ENST00000308161 PXYLP1Q8TE99 480 aa20.38■□□□□ 0.85
HMGCLL1-202ENST00000308161 MKNK2Q9HBH9 465 aa20.38■□□□□ 0.85
HMGCLL1-202ENST00000308161 MAPK4P31152 587 aa20.37■□□□□ 0.85
HMGCLL1-202ENST00000308161 PDE1AP54750 535 aa20.37■□□□□ 0.85
HMGCLL1-202ENST00000308161 SBK1Q52WX2 424 aa20.37■□□□□ 0.85
HMGCLL1-202ENST00000308161 GIMAP6Q6P9H5 292 aa20.37■□□□□ 0.85
HMGCLL1-202ENST00000308161 POTEEQ6S8J3 1075 aa20.37■□□□□ 0.85
HMGCLL1-202ENST00000308161 SH2D4AQ9H788 454 aa20.37■□□□□ 0.85
HMGCLL1-202ENST00000308161 RABGAP1Q9Y3P9 1069 aa20.37■□□□□ 0.85
HMGCLL1-202ENST00000308161 SPDYE16A6NNV3 312 aaPredicted RBP20.36■□□□□ 0.85
HMGCLL1-202ENST00000308161 EEF2P13639 858 aaKnown RBP20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms