RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 ZMYM6O95789 1325 aa17.77■□□□□ 0.43
USP42-201ENST00000306177 TPCN1Q9ULQ1 816 aa17.77■□□□□ 0.43
USP42-201ENST00000306177 CDC42BPAQ5VT25 1732 aa17.77■□□□□ 0.43
USP42-201ENST00000306177 SMCO2A6NFE2 343 aa17.76■□□□□ 0.43
USP42-201ENST00000306177 CCDC25Q86WR0 208 aa17.76■□□□□ 0.43
USP42-201ENST00000306177 NOSTRINQ8IVI9 506 aa17.76■□□□□ 0.43
USP42-201ENST00000306177 TEKT1Q969V4 418 aa17.76■□□□□ 0.43
USP42-201ENST00000306177 PSMD1Q99460 953 aa17.76■□□□□ 0.43
USP42-201ENST00000306177 DBNLQ9UJU6 430 aaKnown RBP17.76■□□□□ 0.43
USP42-201ENST00000306177 CA8P35219 290 aa17.76■□□□□ 0.43
USP42-201ENST00000306177 IL6STP40189 918 aaPredicted RBP17.76■□□□□ 0.43
USP42-201ENST00000306177 MAP3K9P80192 1104 aa17.76■□□□□ 0.43
USP42-201ENST00000306177 CHRNDQ07001 517 aa17.76■□□□□ 0.43
USP42-201ENST00000306177 ARHGAP31Q2M1Z3 1444 aa17.76■□□□□ 0.43
USP42-201ENST00000306177 CFBP00751 764 aa17.76■□□□□ 0.43
USP42-201ENST00000306177 DLGAP5Q15398 846 aa17.76■□□□□ 0.43
USP42-201ENST00000306177 TIGD1Q96MW7 591 aa17.76■□□□□ 0.43
USP42-201ENST00000306177 PUS3Q9BZE2 481 aaKnown RBP17.76■□□□□ 0.43
USP42-201ENST00000306177 NT5C3AQ9H0P0 336 aa17.76■□□□□ 0.43
USP42-201ENST00000306177 TMEM63CQ9P1W3 806 aa17.76■□□□□ 0.43
USP42-201ENST00000306177 PDE8BO95263 885 aa17.76■□□□□ 0.43
USP42-201ENST00000306177 KRT9P35527 623 aa17.76■□□□□ 0.43
USP42-201ENST00000306177 SECISBP2LQ93073 1101 aaKnown RBP17.76■□□□□ 0.43
USP42-201ENST00000306177 NOX5Q96PH1 765 aa17.76■□□□□ 0.43
USP42-201ENST00000306177 SERTAD1Q9UHV2 236 aa17.76■□□□□ 0.43
USP42-201ENST00000306177 TLDC2A0PJX2 215 aa17.75■□□□□ 0.43
USP42-201ENST00000306177 TERF1P54274 439 aa17.75■□□□□ 0.43
USP42-201ENST00000306177 NBPF11Q86T75 865 aa17.75■□□□□ 0.43
USP42-201ENST00000306177 FANCBQ8NB91 859 aa17.75■□□□□ 0.43
USP42-201ENST00000306177 ATP2B4P23634 1241 aa17.75■□□□□ 0.43
USP42-201ENST00000306177 PPM1FP49593 454 aaPredicted RBP17.75■□□□□ 0.43
USP42-201ENST00000306177 USPL1Q5W0Q7 1092 aa17.75■□□□□ 0.43
USP42-201ENST00000306177 CPXCR1Q8N123 301 aa17.75■□□□□ 0.43
USP42-201ENST00000306177 OTUD6BQ8N6M0 293 aa17.75■□□□□ 0.43
USP42-201ENST00000306177 MAK16Q9BXY0 300 aaKnown RBP17.75■□□□□ 0.43
USP42-201ENST00000306177 ATP8A2Q9NTI2 1148 aa17.75■□□□□ 0.43
USP42-201ENST00000306177 DDX39AO00148 427 aaKnown RBP17.75■□□□□ 0.43
USP42-201ENST00000306177 FGAP02671 866 aa17.75■□□□□ 0.43
USP42-201ENST00000306177 MYCT1Q8N699 235 aa17.75■□□□□ 0.43
USP42-201ENST00000306177 CSRNP2Q9H175 543 aa17.75■□□□□ 0.43
USP42-201ENST00000306177 GPR108Q9NPR9 543 aa17.75■□□□□ 0.43
USP42-201ENST00000306177 RGS12O14924 1447 aa17.75■□□□□ 0.43
USP42-201ENST00000306177 CIAO1O76071 339 aa17.75■□□□□ 0.43
USP42-201ENST00000306177 CCDC84Q86UT8 332 aaPredicted RBP17.75■□□□□ 0.43
USP42-201ENST00000306177 NIM1KQ8IY84 436 aa17.75■□□□□ 0.43
USP42-201ENST00000306177 CCDC63Q8NA47 563 aa17.75■□□□□ 0.43
USP42-201ENST00000306177 ADCY9O60503 1353 aa17.74■□□□□ 0.43
USP42-201ENST00000306177 SMIM23A6NLE4 172 aa17.74■□□□□ 0.43
USP42-201ENST00000306177 PFKFB1P16118 471 aa17.74■□□□□ 0.43
USP42-201ENST00000306177 PNOCQ13519 176 aa17.74■□□□□ 0.43
USP42-201ENST00000306177 UBE3CQ15386 1083 aa17.74■□□□□ 0.43
USP42-201ENST00000306177 SDR42E1Q8WUS8 393 aa17.74■□□□□ 0.43
USP42-201ENST00000306177 PPM1EQ8WY54 764 aa17.74■□□□□ 0.43
USP42-201ENST00000306177 CEP63Q96MT8 703 aa17.74■□□□□ 0.43
USP42-201ENST00000306177 CCDC94Q9BW85 323 aaPredicted RBP17.74■□□□□ 0.43
USP42-201ENST00000306177 BLZF1Q9H2G9 400 aa17.74■□□□□ 0.43
USP42-201ENST00000306177 TNKSO95271 1327 aa17.74■□□□□ 0.43
USP42-201ENST00000306177 MAP3K4Q9Y6R4 1608 aa17.74■□□□□ 0.43
USP42-201ENST00000306177 NOP56O00567 594 aaKnown RBP17.74■□□□□ 0.43
USP42-201ENST00000306177 TRPC3Q13507 836 aa17.74■□□□□ 0.43
USP42-201ENST00000306177 MTMR6Q9Y217 621 aa17.74■□□□□ 0.43
USP42-201ENST00000306177 PHKA1P46020 1223 aa17.74■□□□□ 0.43
USP42-201ENST00000306177 LIN9Q5TKA1 542 aa17.74■□□□□ 0.43
USP42-201ENST00000306177 NSMFQ6X4W1 530 aa17.74■□□□□ 0.43
USP42-201ENST00000306177 BLIDQ8IZY5 108 aa17.74■□□□□ 0.43
USP42-201ENST00000306177 ZFP91Q96JP5 570 aaPredicted RBP17.74■□□□□ 0.43
USP42-201ENST00000306177 ZMYND15Q9H091 742 aa17.74■□□□□ 0.43
USP42-201ENST00000306177 OSBPL3Q9H4L5 887 aa17.74■□□□□ 0.43
USP42-201ENST00000306177 BIN2Q9UBW5 565 aaPredicted RBP17.74■□□□□ 0.43
USP42-201ENST00000306177 C8orf74Q6P047 294 aa17.74■□□□□ 0.43
USP42-201ENST00000306177 TLR7Q9NYK1 1049 aaKnown RBP17.74■□□□□ 0.43
USP42-201ENST00000306177 TXNDC16Q9P2K2 825 aa17.74■□□□□ 0.43
USP42-201ENST00000306177 ZHX1Q9UKY1 873 aaPredicted RBP17.74■□□□□ 0.43
USP42-201ENST00000306177 MED23Q9ULK4 1368 aa17.74■□□□□ 0.43
USP42-201ENST00000306177 PPIP5K2O43314 1243 aa17.73■□□□□ 0.43
USP42-201ENST00000306177 STAMQ92783 540 aa17.73■□□□□ 0.43
USP42-201ENST00000306177 USP28Q96RU2 1077 aa17.73■□□□□ 0.43
USP42-201ENST00000306177 TBC1D7Q9P0N9 293 aa17.73■□□□□ 0.43
USP42-201ENST00000306177 KIAA1468Q9P260 1216 aa17.73■□□□□ 0.43
USP42-201ENST00000306177 EXOC3O60645 756 aa17.73■□□□□ 0.43
USP42-201ENST00000306177 UBLCP1Q8WVY7 318 aaPredicted RBP17.73■□□□□ 0.43
USP42-201ENST00000306177 ARAP3Q8WWN8 1544 aa17.73■□□□□ 0.43
USP42-201ENST00000306177 KDM3AQ9Y4C1 1321 aa17.73■□□□□ 0.43
USP42-201ENST00000306177 GCNT3O95395 438 aa17.73■□□□□ 0.43
USP42-201ENST00000306177 ADORA1P30542 326 aa17.73■□□□□ 0.43
USP42-201ENST00000306177 MXRA7P84157 204 aa17.73■□□□□ 0.43
USP42-201ENST00000306177 MAEAQ7L5Y9 396 aa17.73■□□□□ 0.43
USP42-201ENST00000306177 FAM76AQ8TAV0 307 aa17.73■□□□□ 0.43
USP42-201ENST00000306177 MRPL44Q9H9J2 332 aaKnown RBP17.73■□□□□ 0.43
USP42-201ENST00000306177 ECM2O94769 699 aaPredicted RBP17.73■□□□□ 0.43
USP42-201ENST00000306177 TRMT44Q8IYL2 757 aaKnown RBP17.73■□□□□ 0.43
USP42-201ENST00000306177 UBL4BQ8N7F7 174 aa17.73■□□□□ 0.43
USP42-201ENST00000306177 IQCDQ96DY2 449 aa17.73■□□□□ 0.43
USP42-201ENST00000306177 LSG1Q9H089 658 aaKnown RBP17.73■□□□□ 0.43
USP42-201ENST00000306177 ADD1P35611 737 aaKnown RBP17.72■□□□□ 0.43
USP42-201ENST00000306177 BRDTQ58F21 947 aaPredicted RBP17.72■□□□□ 0.43
USP42-201ENST00000306177 UNC5CLQ8IV45 518 aa17.72■□□□□ 0.43
USP42-201ENST00000306177 NELFCDQ8IXH7 590 aa17.72■□□□□ 0.43
USP42-201ENST00000306177 KIAA1524Q8TCG1 905 aa17.72■□□□□ 0.43
USP42-201ENST00000306177 EBAG9O00559 213 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms