RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 HAUS3Q68CZ6 603 aa10.5□□□□□ -0.73
PTPRE-202ENST00000306042 MCTP2Q6DN12 878 aa10.5□□□□□ -0.73
PTPRE-202ENST00000306042 DIS3L2Q8IYB7 885 aaKnown RBP10.5□□□□□ -0.73
PTPRE-202ENST00000306042 FANCBQ8NB91 859 aa10.5□□□□□ -0.73
PTPRE-202ENST00000306042 M0QZ92 97 aa10.5□□□□□ -0.73
PTPRE-202ENST00000306042 PSMD14O00487 310 aa10.5□□□□□ -0.73
PTPRE-202ENST00000306042 KDM6AO15550 1401 aaPredicted RBP10.5□□□□□ -0.73
PTPRE-202ENST00000306042 CYP2E1P05181 493 aaPredicted RBP10.5□□□□□ -0.73
PTPRE-202ENST00000306042 RDXP35241 583 aaKnown RBP10.5□□□□□ -0.73
PTPRE-202ENST00000306042 ASPRV1Q53RT3 343 aa10.5□□□□□ -0.73
PTPRE-202ENST00000306042 DDAH1O94760 285 aa10.5□□□□□ -0.73
PTPRE-202ENST00000306042 CSF1RP07333 972 aa10.5□□□□□ -0.73
PTPRE-202ENST00000306042 CDK8P49336 464 aa10.5□□□□□ -0.73
PTPRE-202ENST00000306042 TXLNBQ8N3L3 684 aa10.5□□□□□ -0.73
PTPRE-202ENST00000306042 AMNQ9BXJ7 453 aa10.5□□□□□ -0.73
PTPRE-202ENST00000306042 CNPY2Q9Y2B0 182 aa10.5□□□□□ -0.73
PTPRE-202ENST00000306042 PCDHA1Q9Y5I3 950 aa10.5□□□□□ -0.73
PTPRE-202ENST00000306042 MTIF2P46199 727 aaKnown RBP10.49□□□□□ -0.73
PTPRE-202ENST00000306042 ZNF397Q8NF99 534 aaPredicted RBP10.49□□□□□ -0.73
PTPRE-202ENST00000306042 BIN1O00499 593 aa10.49□□□□□ -0.73
PTPRE-202ENST00000306042 SRGNP10124 158 aa10.49□□□□□ -0.73
PTPRE-202ENST00000306042 CCT6AP40227 531 aaKnown RBP10.49□□□□□ -0.73
PTPRE-202ENST00000306042 STAT2P52630 851 aa10.49□□□□□ -0.73
PTPRE-202ENST00000306042 OTUD5Q96G74 571 aa10.49□□□□□ -0.73
PTPRE-202ENST00000306042 TMEM106CQ9BVX2 250 aa10.49□□□□□ -0.73
PTPRE-202ENST00000306042 TM6SF1Q9BZW5 370 aa10.49□□□□□ -0.73
PTPRE-202ENST00000306042 FHDC1Q9C0D6 1143 aaPredicted RBP10.49□□□□□ -0.73
PTPRE-202ENST00000306042 OSBPL3Q9H4L5 887 aa10.49□□□□□ -0.73
PTPRE-202ENST00000306042 ADD3Q9UEY8 706 aaKnown RBP10.49□□□□□ -0.73
PTPRE-202ENST00000306042 USP17L5A8MUK1 530 aa10.49□□□□□ -0.73
PTPRE-202ENST00000306042 TXKP42681 527 aa10.49□□□□□ -0.73
PTPRE-202ENST00000306042 CACNA2D4Q7Z3S7 1137 aa10.49□□□□□ -0.73
PTPRE-202ENST00000306042 GGA3Q9NZ52 723 aa10.49□□□□□ -0.73
PTPRE-202ENST00000306042 UBN2Q6ZU65 1347 aa10.49□□□□□ -0.73
PTPRE-202ENST00000306042 PHACTR2O75167 634 aa10.49□□□□□ -0.73
PTPRE-202ENST00000306042 F13A1P00488 732 aa10.49□□□□□ -0.73
PTPRE-202ENST00000306042 KCTD1Q719H9 257 aa10.49□□□□□ -0.73
PTPRE-202ENST00000306042 DHX58Q96C10 678 aa10.49□□□□□ -0.73
PTPRE-202ENST00000306042 PHLPP1O60346 1717 aa10.48□□□□□ -0.73
PTPRE-202ENST00000306042 CYP2D7A0A087X1C5 515 aa10.48□□□□□ -0.73
PTPRE-202ENST00000306042 DNM2P50570 870 aa10.48□□□□□ -0.73
PTPRE-202ENST00000306042 CCDC183Q5T5S1 534 aa10.48□□□□□ -0.73
PTPRE-202ENST00000306042 ANGEL2Q5VTE6 544 aaKnown RBP10.48□□□□□ -0.73
PTPRE-202ENST00000306042 NCAPH2Q6IBW4 605 aa10.48□□□□□ -0.73
PTPRE-202ENST00000306042 MRPS27Q92552 414 aaKnown RBP10.48□□□□□ -0.73
PTPRE-202ENST00000306042 SNX21Q969T3 373 aa10.48□□□□□ -0.73
PTPRE-202ENST00000306042 INTS4Q96HW7 963 aaKnown RBP10.48□□□□□ -0.73
PTPRE-202ENST00000306042 VWA3AA6NCI4 1184 aa10.48□□□□□ -0.73
PTPRE-202ENST00000306042 VPS54Q9P1Q0 977 aa10.48□□□□□ -0.73
PTPRE-202ENST00000306042 CAMTA1Q9Y6Y1 1673 aa10.48□□□□□ -0.73
PTPRE-202ENST00000306042 PXDNQ92626 1479 aa10.48□□□□□ -0.73
PTPRE-202ENST00000306042 RPAP1Q9BWH6 1393 aaPredicted RBP10.48□□□□□ -0.73
PTPRE-202ENST00000306042 KRT13P13646 458 aa10.48□□□□□ -0.73
PTPRE-202ENST00000306042 RASA3Q14644 834 aa10.48□□□□□ -0.73
PTPRE-202ENST00000306042 HS2ST1Q7LGA3 356 aa10.48□□□□□ -0.73
PTPRE-202ENST00000306042 SIRT2Q8IXJ6 389 aa10.48□□□□□ -0.73
PTPRE-202ENST00000306042 POTEB2H3BUK9 544 aa10.48□□□□□ -0.73
PTPRE-202ENST00000306042 MYCP01106 439 aaPredicted RBP10.48□□□□□ -0.73
PTPRE-202ENST00000306042 FAM114A1Q8IWE2 563 aa10.48□□□□□ -0.73
PTPRE-202ENST00000306042 POLRMTO00411 1230 aaKnown RBP10.47□□□□□ -0.73
PTPRE-202ENST00000306042 PRKCSHP14314 528 aaPredicted RBP10.47□□□□□ -0.73
PTPRE-202ENST00000306042 YY1P25490 414 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 ZNF827Q17R98 1081 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 SLC10A5Q5PT55 438 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 FAM160B2Q86V87 743 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 IFT74Q96LB3 600 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 PLIN2Q99541 437 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 RTN4Q9NQC3 1192 aaKnown RBP10.47□□□□□ -0.73
PTPRE-202ENST00000306042 STK24Q9Y6E0 443 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 MAP2P11137 1827 aaKnown RBP10.47□□□□□ -0.73
PTPRE-202ENST00000306042 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.47□□□□□ -0.73
PTPRE-202ENST00000306042 ARHGEF35A5YM69 484 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 SCARF1Q14162 830 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 CMTR1Q8N1G2 835 aaKnown RBP10.47□□□□□ -0.73
PTPRE-202ENST00000306042 FAM212AQ96EL1 285 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 TRIM47Q96LD4 638 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 STRBPQ96SI9 672 aaKnown RBP10.47□□□□□ -0.73
PTPRE-202ENST00000306042 FAM196BA6NMK8 535 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 GAS7O60861 476 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 MRE11P49959 708 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 ZNF157P51786 506 aaPredicted RBP10.47□□□□□ -0.73
PTPRE-202ENST00000306042 SMTNP53814 917 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 UBE2HP62256 183 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 SPP2Q13103 211 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 TTC38Q5R3I4 469 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 ZNF589Q86UQ0 364 aaPredicted RBP10.47□□□□□ -0.73
PTPRE-202ENST00000306042 AGBL3Q8NEM8 1001 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 AP5M1Q9H0R1 490 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 USP17L10C9JJH3 530 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 USP8P40818 1118 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 GIMAP6Q6P9H5 292 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 VPS36Q86VN1 386 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 IQUBQ8NA54 791 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 MAP4K1Q92918 833 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 ZNF274Q96GC6 653 aaPredicted RBP10.47□□□□□ -0.73
PTPRE-202ENST00000306042 NBPF3Q9H094 633 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 KCNJ14Q9UNX9 436 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 KIF20BQ96Q89 1820 aa10.47□□□□□ -0.73
PTPRE-202ENST00000306042 VEGFAP15692 232 aaPredicted RBP10.46□□□□□ -0.73
PTPRE-202ENST00000306042 PLCD1P51178 756 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms