RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 AK2P54819 239 aa11.46□□□□□ -0.57
CLIP1-201ENST00000302528 PAK1Q13153 545 aa11.46□□□□□ -0.57
CLIP1-201ENST00000302528 LONRF2Q1L5Z9 754 aa11.46□□□□□ -0.57
CLIP1-201ENST00000302528 MED10Q9BTT4 135 aa11.46□□□□□ -0.57
CLIP1-201ENST00000302528 BEGAINQ9BUH8 593 aa11.46□□□□□ -0.57
CLIP1-201ENST00000302528 ANKRD2Q9GZV1 360 aa11.46□□□□□ -0.57
CLIP1-201ENST00000302528 JAG2Q9Y219 1238 aa11.46□□□□□ -0.57
CLIP1-201ENST00000302528 PPP1R12AO14974 1030 aaPredicted RBP11.46□□□□□ -0.57
CLIP1-201ENST00000302528 IFNB1P01574 187 aa11.46□□□□□ -0.57
CLIP1-201ENST00000302528 SESN3P58005 492 aa11.46□□□□□ -0.57
CLIP1-201ENST00000302528 YWHAEP62258 255 aaKnown RBP11.46□□□□□ -0.57
CLIP1-201ENST00000302528 PPP2R5AQ15172 486 aa11.46□□□□□ -0.57
CLIP1-201ENST00000302528 PIK3AP1Q6ZUJ8 805 aa11.46□□□□□ -0.57
CLIP1-201ENST00000302528 CCDC13Q8IYE1 715 aa11.46□□□□□ -0.57
CLIP1-201ENST00000302528 MYCT1Q8N699 235 aa11.46□□□□□ -0.57
CLIP1-201ENST00000302528 GOLGA8CPA6NN73 597 aa11.46□□□□□ -0.58
CLIP1-201ENST00000302528 SYF2O95926 243 aaKnown RBP11.46□□□□□ -0.58
CLIP1-201ENST00000302528 HS1BP3Q53T59 392 aa11.46□□□□□ -0.58
CLIP1-201ENST00000302528 NLRP7Q8WX94 980 aa11.46□□□□□ -0.58
CLIP1-201ENST00000302528 TRPC6Q9Y210 931 aa11.46□□□□□ -0.58
CLIP1-201ENST00000302528 BZW2Q9Y6E2 419 aaKnown RBP11.46□□□□□ -0.58
CLIP1-201ENST00000302528 SPDYE2BA6NHP3 402 aa11.46□□□□□ -0.58
CLIP1-201ENST00000302528 SPDYE6P0CI01 402 aa11.46□□□□□ -0.58
CLIP1-201ENST00000302528 GPIHBP1Q8IV16 184 aa11.46□□□□□ -0.58
CLIP1-201ENST00000302528 DISP3Q9P2K9 1392 aa11.46□□□□□ -0.58
CLIP1-201ENST00000302528 S100BP04271 92 aaPredicted RBP11.45□□□□□ -0.58
CLIP1-201ENST00000302528 HERC4Q5GLZ8 1057 aaPredicted RBP11.45□□□□□ -0.58
CLIP1-201ENST00000302528 RASIP1Q5U651 963 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 TEX11Q8IYF3 940 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 HELBQ8NG08 1087 aaPredicted RBP11.45□□□□□ -0.58
CLIP1-201ENST00000302528 ZNF277Q9NRM2 450 aaPredicted RBP11.45□□□□□ -0.58
CLIP1-201ENST00000302528 NUB1Q9Y5A7 615 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 FAM83GA6ND36 823 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 HNRNPCL2B2RXH8 293 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 CAPN9O14815 690 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 HNRNPCL1O60812 293 aaKnown RBP11.45□□□□□ -0.58
CLIP1-201ENST00000302528 SAT1P21673 171 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 CREB3L3Q68CJ9 461 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 ATL3Q6DD88 541 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 SCYL2Q6P3W7 929 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 DCLK2Q8N568 766 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 EIF2AQ9BY44 585 aaKnown RBP11.45□□□□□ -0.58
CLIP1-201ENST00000302528 NUCKS1Q9H1E3 243 aaKnown RBP11.45□□□□□ -0.58
CLIP1-201ENST00000302528 ALDH1L1O75891 902 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 MEIS3Q99687 375 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 AMOTL2Q9Y2J4 779 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 RIPOR2Q9Y4F9 1068 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 PFDN1O60925 122 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 CHRNA2Q15822 529 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 SFMBT2Q5VUG0 894 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 PARD3BQ8TEW8 1205 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 RAB20Q9NX57 234 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 SUFUQ9UMX1 484 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 PARD3Q8TEW0 1356 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 GPATCH8Q9UKJ3 1502 aaKnown RBP11.45□□□□□ -0.58
CLIP1-201ENST00000302528 GPC4O75487 556 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 GCNT3O95395 438 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 ATXN8OSP0DMR3 200 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 TNNI1P19237 187 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 TMTC1Q8IUR5 882 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 GLT8D2Q9H1C3 349 aa11.45□□□□□ -0.58
CLIP1-201ENST00000302528 GNGT2O14610 69 aa11.44□□□□□ -0.58
CLIP1-201ENST00000302528 EIF6P56537 245 aaKnown RBP11.44□□□□□ -0.58
CLIP1-201ENST00000302528 ZYXQ15942 572 aaKnown RBP11.44□□□□□ -0.58
CLIP1-201ENST00000302528 ARHGAP44Q17R89 818 aa11.44□□□□□ -0.58
CLIP1-201ENST00000302528 SNX29Q8TEQ0 813 aa11.44□□□□□ -0.58
CLIP1-201ENST00000302528 HOMER3Q9NSC5 361 aa11.44□□□□□ -0.58
CLIP1-201ENST00000302528 TFCP2L1Q9NZI6 479 aa11.44□□□□□ -0.58
CLIP1-201ENST00000302528 TBC1D7Q9P0N9 293 aa11.44□□□□□ -0.58
CLIP1-201ENST00000302528 DNM3Q9UQ16 869 aa11.44□□□□□ -0.58
CLIP1-201ENST00000302528 KIF14Q15058 1648 aa11.44□□□□□ -0.58
CLIP1-201ENST00000302528 CTNNA1P35221 906 aaKnown RBP11.44□□□□□ -0.58
CLIP1-201ENST00000302528 HSP90AA5PQ58FG0 334 aa11.44□□□□□ -0.58
CLIP1-201ENST00000302528 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.44□□□□□ -0.58
CLIP1-201ENST00000302528 DZIP3Q86Y13 1208 aaKnown RBP11.44□□□□□ -0.58
CLIP1-201ENST00000302528 DDX41Q9UJV9 622 aaKnown RBP11.44□□□□□ -0.58
CLIP1-201ENST00000302528 KCNH3Q9ULD8 1083 aa11.44□□□□□ -0.58
CLIP1-201ENST00000302528 RSBN1LQ6PCB5 846 aaPredicted RBP11.44□□□□□ -0.58
CLIP1-201ENST00000302528 PDZD4Q76G19 769 aaPredicted RBP11.44□□□□□ -0.58
CLIP1-201ENST00000302528 ZCRB1Q8TBF4 217 aaKnown RBP11.44□□□□□ -0.58
CLIP1-201ENST00000302528 HAUS1Q96CS2 278 aa11.44□□□□□ -0.58
CLIP1-201ENST00000302528 ZC4H2Q9NQZ6 224 aa11.44□□□□□ -0.58
CLIP1-201ENST00000302528 THEGQ9P2T0 379 aa11.44□□□□□ -0.58
CLIP1-201ENST00000302528 FAM8A1Q9UBU6 413 aa11.44□□□□□ -0.58
CLIP1-201ENST00000302528 ORC6Q9Y5N6 252 aa11.44□□□□□ -0.58
CLIP1-201ENST00000302528 DEXIO95424 95 aa11.44□□□□□ -0.58
CLIP1-201ENST00000302528 TRIM4Q9C037 500 aa11.44□□□□□ -0.58
CLIP1-201ENST00000302528 RNF123Q5XPI4 1314 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 VPS41P49754 854 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 ASPHQ12797 758 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 FNBP4Q8N3X1 1017 aaPredicted RBP11.43□□□□□ -0.58
CLIP1-201ENST00000302528 CCDC124Q96CT7 223 aaKnown RBP11.43□□□□□ -0.58
CLIP1-201ENST00000302528 MRPL44Q9H9J2 332 aaKnown RBP11.43□□□□□ -0.58
CLIP1-201ENST00000302528 ANGPTL3Q9Y5C1 460 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 CAPN7Q9Y6W3 813 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 ARHGAP6O43182 974 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 RAPGEF3O95398 923 aa11.43□□□□□ -0.58
CLIP1-201ENST00000302528 OAS2P29728 719 aaKnown RBP11.43□□□□□ -0.58
CLIP1-201ENST00000302528 NOP14P78316 857 aaKnown RBP11.43□□□□□ -0.58
CLIP1-201ENST00000302528 FANCCQ00597 558 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms