RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 RGPD1P0DJD0 1748 aa12.86□□□□□ -0.35
TRUB1-201ENST00000298746 A0A087WUV0 522 aaPredicted RBP12.86□□□□□ -0.35
TRUB1-201ENST00000298746 RANBP6O60518 1105 aaKnown RBP12.86□□□□□ -0.35
TRUB1-201ENST00000298746 IDEP14735 1019 aa12.86□□□□□ -0.35
TRUB1-201ENST00000298746 TRIM21P19474 475 aaKnown RBP12.86□□□□□ -0.35
TRUB1-201ENST00000298746 INPP5BP32019 993 aa12.86□□□□□ -0.35
TRUB1-201ENST00000298746 NOC3LQ8WTT2 800 aaKnown RBP12.86□□□□□ -0.35
TRUB1-201ENST00000298746 CHP1Q99653 195 aa12.86□□□□□ -0.35
TRUB1-201ENST00000298746 AXIN2Q9Y2T1 843 aa12.86□□□□□ -0.35
TRUB1-201ENST00000298746 GYPCP04921 128 aa12.85□□□□□ -0.35
TRUB1-201ENST00000298746 GNGT1P63211 74 aa12.85□□□□□ -0.35
TRUB1-201ENST00000298746 FOXO4P98177 505 aa12.85□□□□□ -0.35
TRUB1-201ENST00000298746 DHX37Q8IY37 1157 aaKnown RBP12.85□□□□□ -0.35
TRUB1-201ENST00000298746 OXER1Q8TDS5 423 aa12.85□□□□□ -0.35
TRUB1-201ENST00000298746 VPS54Q9P1Q0 977 aa12.85□□□□□ -0.35
TRUB1-201ENST00000298746 ZNF532Q9HCE3 1301 aa12.85□□□□□ -0.35
TRUB1-201ENST00000298746 CCDC196A0A1B0GTZ2 297 aa12.85□□□□□ -0.35
TRUB1-201ENST00000298746 KRT86O43790 486 aa12.85□□□□□ -0.35
TRUB1-201ENST00000298746 GPTP24298 496 aa12.85□□□□□ -0.35
TRUB1-201ENST00000298746 RDXP35241 583 aaKnown RBP12.85□□□□□ -0.35
TRUB1-201ENST00000298746 CKAP4Q07065 602 aaKnown RBP12.85□□□□□ -0.35
TRUB1-201ENST00000298746 IQUBQ8NA54 791 aa12.85□□□□□ -0.35
TRUB1-201ENST00000298746 HELBQ8NG08 1087 aaPredicted RBP12.85□□□□□ -0.35
TRUB1-201ENST00000298746 SYMPKQ92797 1274 aaKnown RBP12.85□□□□□ -0.35
TRUB1-201ENST00000298746 POLD4Q9HCU8 107 aa12.85□□□□□ -0.35
TRUB1-201ENST00000298746 ADD3Q9UEY8 706 aaKnown RBP12.85□□□□□ -0.35
TRUB1-201ENST00000298746 AGLP35573 1532 aa12.85□□□□□ -0.35
TRUB1-201ENST00000298746 NDUFAB1O14561 156 aa12.85□□□□□ -0.35
TRUB1-201ENST00000298746 MMP1P03956 469 aa12.85□□□□□ -0.35
TRUB1-201ENST00000298746 USP5P45974 858 aa12.85□□□□□ -0.35
TRUB1-201ENST00000298746 KRT31Q15323 416 aa12.85□□□□□ -0.35
TRUB1-201ENST00000298746 JAKMIP2Q96AA8 810 aa12.85□□□□□ -0.35
TRUB1-201ENST00000298746 MMS19Q96T76 1030 aa12.85□□□□□ -0.35
TRUB1-201ENST00000298746 ABHD10Q9NUJ1 306 aa12.85□□□□□ -0.35
TRUB1-201ENST00000298746 FBXO2Q9UK22 296 aaPredicted RBP12.85□□□□□ -0.35
TRUB1-201ENST00000298746 GUCY2CP25092 1073 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 SPAG1Q07617 926 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 IQCEQ6IPM2 695 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 CCDC91Q7Z6B0 441 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 CCDC51Q96ER9 411 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 ORAI2Q96SN7 254 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 CAPS2Q9BXY5 557 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 ZSWIM5Q9P217 1185 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 PLEKHG1Q9ULL1 1385 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 PRDM1O75626 825 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 CD44P16070 742 aaKnown RBP12.84□□□□□ -0.35
TRUB1-201ENST00000298746 ATP1A2P50993 1020 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 CCDC96Q2M329 555 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 FBXW10Q5XX13 1052 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 MMS22LQ6ZRQ5 1243 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 ANKRD18AQ8IVF6 992 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 OTUD6BQ8N6M0 293 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 GPR108Q9NPR9 543 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 SEC31BQ9NQW1 1179 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 ATG3Q9NT62 314 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 MTMR7Q9Y216 660 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 FAM169AQ9Y6X4 670 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 PXDNQ92626 1479 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.84□□□□□ -0.35
TRUB1-201ENST00000298746 NDUFA10O95299 355 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 ATP1A1P05023 1023 aaKnown RBP12.84□□□□□ -0.35
TRUB1-201ENST00000298746 COPB1P53618 953 aaKnown RBP12.84□□□□□ -0.35
TRUB1-201ENST00000298746 ERVK-24P63145 666 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 TTF1Q15361 905 aaPredicted RBP12.84□□□□□ -0.35
TRUB1-201ENST00000298746 TRIM47Q96LD4 638 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 PLIN2Q99541 437 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 NACAP1Q9BZK3 213 aa12.84□□□□□ -0.35
TRUB1-201ENST00000298746 FAM205CA6NFA0 338 aa12.83□□□□□ -0.36
TRUB1-201ENST00000298746 KCNJ18B7U540 433 aa12.83□□□□□ -0.36
TRUB1-201ENST00000298746 MBD4O95243 580 aa12.83□□□□□ -0.36
TRUB1-201ENST00000298746 TOB1P50616 345 aaPredicted RBP12.83□□□□□ -0.36
TRUB1-201ENST00000298746 C2orf54Q08AI8 447 aa12.83□□□□□ -0.36
TRUB1-201ENST00000298746 PAK1Q13153 545 aa12.83□□□□□ -0.36
TRUB1-201ENST00000298746 KCNJ12Q14500 433 aa12.83□□□□□ -0.36
TRUB1-201ENST00000298746 SPA17Q15506 151 aa12.83□□□□□ -0.36
TRUB1-201ENST00000298746 CHRNA2Q15822 529 aa12.83□□□□□ -0.36
TRUB1-201ENST00000298746 OR8K1Q8NGG5 319 aa12.83□□□□□ -0.36
TRUB1-201ENST00000298746 NELFBQ8WX92 580 aa12.83□□□□□ -0.36
TRUB1-201ENST00000298746 PAGE5Q96GU1 130 aa12.83□□□□□ -0.36
TRUB1-201ENST00000298746 KAT14Q9H8E8 782 aa12.83□□□□□ -0.36
TRUB1-201ENST00000298746 ARMT1Q9H993 441 aa12.83□□□□□ -0.36
TRUB1-201ENST00000298746 SRPRBQ9Y5M8 271 aaKnown RBP12.83□□□□□ -0.36
TRUB1-201ENST00000298746 CAPN7Q9Y6W3 813 aa12.83□□□□□ -0.36
TRUB1-201ENST00000298746 DEXIO95424 95 aa12.83□□□□□ -0.36
TRUB1-201ENST00000298746 USP14P54578 494 aa12.83□□□□□ -0.36
TRUB1-201ENST00000298746 KCTD16Q68DU8 428 aa12.83□□□□□ -0.36
TRUB1-201ENST00000298746 SELENOOQ9BVL4 669 aa12.83□□□□□ -0.36
TRUB1-201ENST00000298746 EHD4Q9H223 541 aa12.83□□□□□ -0.36
TRUB1-201ENST00000298746 H7C1W4 665 aa12.82□□□□□ -0.36
TRUB1-201ENST00000298746 ZNF185O15231 689 aa12.82□□□□□ -0.36
TRUB1-201ENST00000298746 MDM2Q00987 491 aaPredicted RBP12.82□□□□□ -0.36
TRUB1-201ENST00000298746 COG1Q8WTW3 980 aa12.82□□□□□ -0.36
TRUB1-201ENST00000298746 HAUS4Q9H6D7 363 aa12.82□□□□□ -0.36
TRUB1-201ENST00000298746 PHKG2P15735 406 aa12.82□□□□□ -0.36
TRUB1-201ENST00000298746 CYLC1P35663 651 aaPredicted RBP12.82□□□□□ -0.36
TRUB1-201ENST00000298746 MAP2K2P36507 400 aa12.82□□□□□ -0.36
TRUB1-201ENST00000298746 KRT83P78385 493 aa12.82□□□□□ -0.36
TRUB1-201ENST00000298746 CYP27A1Q02318 531 aa12.82□□□□□ -0.36
TRUB1-201ENST00000298746 KIF5AQ12840 1032 aa12.82□□□□□ -0.36
TRUB1-201ENST00000298746 MAGEB6Q8N7X4 407 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms