RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 RPS6KC1Q96S38 1066 aa7.71□□□□□ -1.17
GAPVD1-202ENST00000297933 RNF216Q9NWF9 866 aaPredicted RBP7.71□□□□□ -1.17
GAPVD1-202ENST00000297933 NOC2LQ9Y3T9 749 aaKnown RBP7.71□□□□□ -1.17
GAPVD1-202ENST00000297933 NDUFB9Q9Y6M9 179 aa7.71□□□□□ -1.17
GAPVD1-202ENST00000297933 ARHGEF12Q9NZN5 1544 aa7.71□□□□□ -1.18
GAPVD1-202ENST00000297933 AOX1Q06278 1338 aa7.71□□□□□ -1.18
GAPVD1-202ENST00000297933 TMEM232C9JQI7 657 aa7.71□□□□□ -1.18
GAPVD1-202ENST00000297933 GIGYF1O75420 1035 aaPredicted RBP7.71□□□□□ -1.18
GAPVD1-202ENST00000297933 OATP04181 439 aa7.71□□□□□ -1.18
GAPVD1-202ENST00000297933 PSMC4P43686 418 aa7.71□□□□□ -1.18
GAPVD1-202ENST00000297933 SLFN13Q68D06 897 aa7.71□□□□□ -1.18
GAPVD1-202ENST00000297933 DIS3L2Q8IYB7 885 aaKnown RBP7.71□□□□□ -1.18
GAPVD1-202ENST00000297933 FAM227BQ96M60 508 aa7.71□□□□□ -1.18
GAPVD1-202ENST00000297933 ZNF830Q96NB3 372 aaPredicted RBP7.71□□□□□ -1.18
GAPVD1-202ENST00000297933 SUGCTQ9HAC7 445 aa7.71□□□□□ -1.18
GAPVD1-202ENST00000297933 ERBB4Q15303 1308 aa7.71□□□□□ -1.18
GAPVD1-202ENST00000297933 ERCC5P28715 1186 aaPredicted RBP7.71□□□□□ -1.18
GAPVD1-202ENST00000297933 RAD51AP2Q09MP3 1159 aa7.71□□□□□ -1.18
GAPVD1-202ENST00000297933 XKR9Q5GH70 373 aa7.71□□□□□ -1.18
GAPVD1-202ENST00000297933 TEKT3Q9BXF9 490 aa7.71□□□□□ -1.18
GAPVD1-202ENST00000297933 DISP1Q96F81 1524 aa7.71□□□□□ -1.18
GAPVD1-202ENST00000297933 KDM3AQ9Y4C1 1321 aa7.71□□□□□ -1.18
GAPVD1-202ENST00000297933 CTAGE9A4FU28 777 aa7.71□□□□□ -1.18
GAPVD1-202ENST00000297933 TNNC2P02585 160 aa7.71□□□□□ -1.18
GAPVD1-202ENST00000297933 DCUN1D2Q6PH85 259 aa7.71□□□□□ -1.18
GAPVD1-202ENST00000297933 ZSCAN10Q96SZ4 725 aaPredicted RBP7.71□□□□□ -1.18
GAPVD1-202ENST00000297933 NSRP1Q9H0G5 558 aaKnown RBP7.71□□□□□ -1.18
GAPVD1-202ENST00000297933 CFAP65Q6ZU64 1925 aaKnown RBP7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 BLMP54132 1417 aaPredicted RBP7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 CFAP43Q8NDM7 1665 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 ERICH4A6NGS2 130 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 ZBTB7BO15156 539 aaPredicted RBP7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 NPR1P16066 1061 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 LIG4P49917 911 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 GEN1Q17RS7 908 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 ANO1Q5XXA6 986 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 IWS1Q96ST2 819 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 LLPHQ9BRT6 129 aaKnown RBP7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 NT5C3AQ9H0P0 336 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 MTRF1LQ9UGC7 380 aaKnown RBP7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 SWAP70Q9UH65 585 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 KCNQ3O43525 872 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 FMNL1O95466 1100 aaPredicted RBP7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 PRR16Q569H4 304 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 GUCA1BQ9UMX6 200 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 WDR17Q8IZU2 1322 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 SEMA3EO15041 775 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 KCNQ4P56696 695 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 IFRD2Q12894 506 aaPredicted RBP7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 CFAP157Q5JU67 520 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 CC2D2BQ6DHV5 1058 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 CCDC25Q86WR0 208 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 SMC1BQ8NDV3 1235 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 NCOA5Q9HCD5 579 aaKnown RBP7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 H0YCG3 227 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 RIOK3O14730 519 aaKnown RBP7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 CPA1P15085 419 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 POLGP54098 1239 aaPredicted RBP7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 CALCOCO2Q13137 446 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 TFDP1Q14186 410 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 KRT26Q7Z3Y9 468 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 SLFN12Q8IYM2 578 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 PHKBQ93100 1093 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 MMS19Q96T76 1030 aa7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 ADD3Q9UEY8 706 aaKnown RBP7.7□□□□□ -1.18
GAPVD1-202ENST00000297933 A0A1B0GVL5 298 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 hCG_1642624A0A1W2PR95 340 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 TBC1D8BQ0IIM8 1120 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 POLA2Q14181 598 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 KLHL40Q2TBA0 621 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 CDC37L1Q7L3B6 337 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 SDR42E1Q8WUS8 393 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 CAPZA3Q96KX2 299 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 PPP1R9BQ96SB3 815 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 USTQ9Y2C2 406 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 CSPG5O95196 566 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 BCRP11274 1271 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 SND1Q7KZF4 910 aaKnown RBP eCLIP7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 NELFCDQ8IXH7 590 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 CSGALNACT2Q8N6G5 542 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 IPO4Q8TEX9 1081 aaKnown RBP7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 KDM5CP41229 1560 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 POLR3GO15318 223 aaPredicted RBP7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 RLBP1P12271 317 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 SKILP12757 684 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 IFNL3Q8IZI9 196 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 GREM2Q9H772 168 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.69□□□□□ -1.189e-7■■□□□ 13.5
GAPVD1-202ENST00000297933 KCNH3Q9ULD8 1083 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 TTLL3Q9Y4R7 772 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 INSRP06213 1382 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 KDM5DQ9BY66 1539 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 CUTAO60888 179 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 ATP5JP18859 108 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 UAP1Q16222 522 aaPredicted RBP7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 SEPT14Q6ZU15 432 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 PLA2G4DQ86XP0 818 aa7.69□□□□□ -1.18
GAPVD1-202ENST00000297933 TBC1D31Q96DN5 1066 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms