RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 FEZ1Q99689 392 aa11.8□□□□□ -0.52
CCDC58-201ENST00000291458 GPHNQ9NQX3 736 aaPredicted RBP11.8□□□□□ -0.52
CCDC58-201ENST00000291458 ZBTB21Q9ULJ3 1066 aa11.8□□□□□ -0.52
CCDC58-201ENST00000291458 PTCH2Q9Y6C5 1203 aa11.8□□□□□ -0.52
CCDC58-201ENST00000291458 ADGRA2Q96PE1 1338 aa11.8□□□□□ -0.52
CCDC58-201ENST00000291458 CYP2D7A0A087X1C5 515 aa11.79□□□□□ -0.52
CCDC58-201ENST00000291458 C2orf72A6NCS6 295 aa11.79□□□□□ -0.52
CCDC58-201ENST00000291458 MPHOSPH10O00566 681 aaKnown RBP11.79□□□□□ -0.52
CCDC58-201ENST00000291458 PLCD1P51178 756 aa11.79□□□□□ -0.52
CCDC58-201ENST00000291458 LACTBP83111 547 aaPredicted RBP11.79□□□□□ -0.52
CCDC58-201ENST00000291458 RAB3GAP1Q15042 981 aa11.79□□□□□ -0.52
CCDC58-201ENST00000291458 CERS3Q8IU89 383 aa11.79□□□□□ -0.52
CCDC58-201ENST00000291458 STK11IPQ8N1F8 1099 aa11.79□□□□□ -0.52
CCDC58-201ENST00000291458 SLC44A5Q8NCS7 719 aa11.79□□□□□ -0.52
CCDC58-201ENST00000291458 AS3MTQ9HBK9 375 aa11.79□□□□□ -0.52
CCDC58-201ENST00000291458 ZCCHC17Q9NP64 241 aaKnown RBP11.79□□□□□ -0.52
CCDC58-201ENST00000291458 SERPINB13Q9UIV8 391 aa11.79□□□□□ -0.52
CCDC58-201ENST00000291458 AGTPBP1Q9UPW5 1226 aa11.79□□□□□ -0.52
CCDC58-201ENST00000291458 PTPN22Q9Y2R2 807 aa11.79□□□□□ -0.52
CCDC58-201ENST00000291458 SMIM22K7EJ46 135 aa11.78□□□□□ -0.52
CCDC58-201ENST00000291458 FMNL1O95466 1100 aaPredicted RBP11.78□□□□□ -0.52
CCDC58-201ENST00000291458 CTGFP29279 349 aa11.78□□□□□ -0.52
CCDC58-201ENST00000291458 PSMC4P43686 418 aa11.78□□□□□ -0.52
CCDC58-201ENST00000291458 ANKRD45Q5TZF3 282 aa11.78□□□□□ -0.52
CCDC58-201ENST00000291458 TTC6Q86TZ1 520 aa11.78□□□□□ -0.52
CCDC58-201ENST00000291458 FOXP4Q8IVH2 680 aaPredicted RBP11.78□□□□□ -0.52
CCDC58-201ENST00000291458 ANKRD13CQ8N6S4 541 aa11.78□□□□□ -0.52
CCDC58-201ENST00000291458 EXOC6Q8TAG9 804 aa11.78□□□□□ -0.52
CCDC58-201ENST00000291458 DYNLL2Q96FJ2 89 aa11.78□□□□□ -0.52
CCDC58-201ENST00000291458 DCP1AQ9NPI6 582 aaPredicted RBP11.78□□□□□ -0.52
CCDC58-201ENST00000291458 SLC4A4Q9Y6R1 1079 aa11.78□□□□□ -0.52
CCDC58-201ENST00000291458 PEX10O60683 326 aa11.77□□□□□ -0.53
CCDC58-201ENST00000291458 IGSF3O75054 1194 aa11.77□□□□□ -0.53
CCDC58-201ENST00000291458 ASNSP08243 561 aa11.77□□□□□ -0.53
CCDC58-201ENST00000291458 IRX3P78415 501 aaPredicted RBP11.77□□□□□ -0.53
CCDC58-201ENST00000291458 MLLT1Q03111 559 aaPredicted RBP11.77□□□□□ -0.53
CCDC58-201ENST00000291458 ABCB5Q2M3G0 1257 aa11.77□□□□□ -0.53
CCDC58-201ENST00000291458 CERKLQ49MI3 558 aaPredicted RBP11.77□□□□□ -0.53
CCDC58-201ENST00000291458 SLC9C1Q4G0N8 1177 aa11.77□□□□□ -0.53
CCDC58-201ENST00000291458 C17orf99Q6UX52 265 aa11.77□□□□□ -0.53
CCDC58-201ENST00000291458 CLEC10AQ8IUN9 316 aa11.77□□□□□ -0.53
CCDC58-201ENST00000291458 SH3TC2Q8TF17 1288 aa11.77□□□□□ -0.53
CCDC58-201ENST00000291458 TRIM47Q96LD4 638 aa11.77□□□□□ -0.53
CCDC58-201ENST00000291458 FSD1Q9BTV5 496 aa11.77□□□□□ -0.53
CCDC58-201ENST00000291458 PUS7LQ9H0K6 701 aaKnown RBP11.77□□□□□ -0.53
CCDC58-201ENST00000291458 TMOD4Q9NZQ9 345 aa11.77□□□□□ -0.53
CCDC58-201ENST00000291458 SUPT16HQ9Y5B9 1047 aaKnown RBP11.77□□□□□ -0.53
CCDC58-201ENST00000291458 M0R2C6 588 aa11.76□□□□□ -0.53
CCDC58-201ENST00000291458 MX1P20591 662 aa11.76□□□□□ -0.53
CCDC58-201ENST00000291458 SHMT1P34896 483 aa11.76□□□□□ -0.53
CCDC58-201ENST00000291458 ARHGEF6Q15052 776 aa11.76□□□□□ -0.53
CCDC58-201ENST00000291458 B4GALNT3Q6L9W6 998 aa11.76□□□□□ -0.53
CCDC58-201ENST00000291458 ZSCAN25Q6NSZ9 544 aa11.76□□□□□ -0.53
CCDC58-201ENST00000291458 KBTBD3Q8NAB2 608 aa11.76□□□□□ -0.53
CCDC58-201ENST00000291458 PROCA1Q8NCQ7 364 aaPredicted RBP11.76□□□□□ -0.53
CCDC58-201ENST00000291458 EHD4Q9H223 541 aa11.76□□□□□ -0.53
CCDC58-201ENST00000291458 PNMA3Q9UL41 463 aa11.76□□□□□ -0.53
CCDC58-201ENST00000291458 MYPNQ86TC9 1320 aa11.76□□□□□ -0.53
CCDC58-201ENST00000291458 ERC2O15083 957 aa11.75□□□□□ -0.53
CCDC58-201ENST00000291458 BCRP11274 1271 aa11.75□□□□□ -0.53
CCDC58-201ENST00000291458 OSBPP22059 807 aa11.75□□□□□ -0.53
CCDC58-201ENST00000291458 FCGRTP55899 365 aa11.75□□□□□ -0.53
CCDC58-201ENST00000291458 BACE1P56817 501 aa11.75□□□□□ -0.53
CCDC58-201ENST00000291458 FOXK1P85037 733 aa11.75□□□□□ -0.53
CCDC58-201ENST00000291458 PRKCZQ05513 592 aa11.75□□□□□ -0.53
CCDC58-201ENST00000291458 SEPT2Q15019 361 aa11.75□□□□□ -0.53
CCDC58-201ENST00000291458 UBE3CQ15386 1083 aa11.75□□□□□ -0.53
CCDC58-201ENST00000291458 AMOTL1Q8IY63 956 aa11.75□□□□□ -0.53
CCDC58-201ENST00000291458 PI4K2BQ8TCG2 481 aa11.75□□□□□ -0.53
CCDC58-201ENST00000291458 RAET1EQ8TD07 263 aa11.75□□□□□ -0.53
CCDC58-201ENST00000291458 ACER1Q8TDN7 264 aa11.75□□□□□ -0.53
CCDC58-201ENST00000291458 DDRGK1Q96HY6 314 aa11.75□□□□□ -0.53
CCDC58-201ENST00000291458 PAGR1Q9BTK6 254 aa11.75□□□□□ -0.53
CCDC58-201ENST00000291458 LNPKQ9C0E8 428 aa11.75□□□□□ -0.53
CCDC58-201ENST00000291458 ASCC2Q9H1I8 757 aaPredicted RBP11.75□□□□□ -0.53
CCDC58-201ENST00000291458 CABP5Q9NP86 173 aa11.75□□□□□ -0.53
CCDC58-201ENST00000291458 TTC41PQ6P2S7 1318 aa11.75□□□□□ -0.53
CCDC58-201ENST00000291458 RBBP6Q7Z6E9 1792 aaKnown RBP11.74□□□□□ -0.53
CCDC58-201ENST00000291458 DOCK3Q8IZD9 2030 aa11.74□□□□□ -0.53
CCDC58-201ENST00000291458 USP17L10C9JJH3 530 aa11.74□□□□□ -0.53
CCDC58-201ENST00000291458 USP17L12C9JPN9 530 aa11.74□□□□□ -0.53
CCDC58-201ENST00000291458 USP17L21D6R901 530 aa11.74□□□□□ -0.53
CCDC58-201ENST00000291458 TNPO2O14787 897 aaKnown RBP11.74□□□□□ -0.53
CCDC58-201ENST00000291458 RNF113AO15541 343 aaKnown RBP11.74□□□□□ -0.53
CCDC58-201ENST00000291458 GLRX3O76003 335 aaKnown RBP11.74□□□□□ -0.53
CCDC58-201ENST00000291458 ATP2B2Q01814 1243 aa11.74□□□□□ -0.53
CCDC58-201ENST00000291458 PABPC4Q13310 644 aaKnown RBP eCLIP11.74□□□□□ -0.535e-11■■■■□ 19.3
CCDC58-201ENST00000291458 TATDN1Q6P1N9 297 aa11.74□□□□□ -0.53
CCDC58-201ENST00000291458 TMED8Q6PL24 325 aaPredicted RBP11.74□□□□□ -0.53
CCDC58-201ENST00000291458 METTL16Q86W50 562 aaKnown RBP11.74□□□□□ -0.53
CCDC58-201ENST00000291458 APPBP2Q92624 585 aa11.74□□□□□ -0.53
CCDC58-201ENST00000291458 OSBP2Q969R2 916 aa11.74□□□□□ -0.53
CCDC58-201ENST00000291458 LARP6Q9BRS8 491 aaKnown RBP11.74□□□□□ -0.53
CCDC58-201ENST00000291458 WDR18Q9BV38 432 aa11.74□□□□□ -0.53
CCDC58-201ENST00000291458 TBC1D2Q9BYX2 928 aa11.74□□□□□ -0.53
CCDC58-201ENST00000291458 BIN2Q9UBW5 565 aaPredicted RBP11.74□□□□□ -0.53
CCDC58-201ENST00000291458 GABRQQ9UN88 632 aa11.74□□□□□ -0.53
CCDC58-201ENST00000291458 MINDY4BA8MYZ0 360 aa11.73□□□□□ -0.53
CCDC58-201ENST00000291458 GPAA1O43292 621 aa11.73□□□□□ -0.53
CCDC58-201ENST00000291458 RAD21O60216 631 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms