RNA–Protein interactions for RNA: ENST00000276241.10

CT55-201, Transcript of cancer/testis antigen 55, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CT55, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-201ENST00000276241 ANKRD13CQ8N6S4 541 aa16.28■□□□□ 0.2
CT55-201ENST00000276241 ACER1Q8TDN7 264 aa16.28■□□□□ 0.2
CT55-201ENST00000276241 BCRP11274 1271 aa16.28■□□□□ 0.2
CT55-201ENST00000276241 ARHGEF6Q15052 776 aa16.28■□□□□ 0.2
CT55-201ENST00000276241 GIMAP6Q6P9H5 292 aa16.28■□□□□ 0.2
CT55-201ENST00000276241 USP17L2Q6R6M4 530 aa16.28■□□□□ 0.2
CT55-201ENST00000276241 TMEM179Q6ZVK1 233 aa16.28■□□□□ 0.2
CT55-201ENST00000276241 NACAP1Q9BZK3 213 aa16.28■□□□□ 0.2
CT55-201ENST00000276241 ASCC2Q9H1I8 757 aaPredicted RBP16.28■□□□□ 0.2
CT55-201ENST00000276241 EMILIN3Q9NT22 766 aa16.28■□□□□ 0.2
CT55-201ENST00000276241 PTPN22Q9Y2R2 807 aa16.28■□□□□ 0.2
CT55-201ENST00000276241 ROBO3Q96MS0 1386 aa16.27■□□□□ 0.2
CT55-201ENST00000276241 A0A0D9SFI3 127 aa16.27■□□□□ 0.19
CT55-201ENST00000276241 PATL2C9JE40 543 aaKnown RBP16.27■□□□□ 0.19
CT55-201ENST00000276241 FMNL1O95466 1100 aaPredicted RBP16.27■□□□□ 0.19
CT55-201ENST00000276241 CTGFP29279 349 aa16.27■□□□□ 0.19
CT55-201ENST00000276241 PSMC4P43686 418 aa16.27■□□□□ 0.19
CT55-201ENST00000276241 SBK1Q52WX2 424 aa16.27■□□□□ 0.19
CT55-201ENST00000276241 IFNL3Q8IZI9 196 aa16.27■□□□□ 0.19
CT55-201ENST00000276241 FAM227BQ96M60 508 aa16.27■□□□□ 0.19
CT55-201ENST00000276241 NAPBQ9H115 298 aa16.27■□□□□ 0.19
CT55-201ENST00000276241 OSBPL3Q9H4L5 887 aa16.27■□□□□ 0.19
CT55-201ENST00000276241 PDE4AP27815 886 aa16.26■□□□□ 0.19
CT55-201ENST00000276241 USP14P54578 494 aa16.26■□□□□ 0.19
CT55-201ENST00000276241 ICA1Q05084 483 aa16.26■□□□□ 0.19
CT55-201ENST00000276241 NMIQ13287 307 aaPredicted RBP16.26■□□□□ 0.19
CT55-201ENST00000276241 KIAA1683Q9H0B3 1180 aa16.26■□□□□ 0.19
CT55-201ENST00000276241 TAOK2Q9UL54 1235 aa16.26■□□□□ 0.19
CT55-201ENST00000276241 PTCH2Q9Y6C5 1203 aa16.26■□□□□ 0.19
CT55-201ENST00000276241 FCGRTP55899 365 aa16.25■□□□□ 0.19
CT55-201ENST00000276241 SOX10P56693 466 aa16.25■□□□□ 0.19
CT55-201ENST00000276241 TRIM47Q96LD4 638 aa16.25■□□□□ 0.19
CT55-201ENST00000276241 CCDC17Q96LX7 622 aa16.25■□□□□ 0.19
CT55-201ENST00000276241 MKNK2Q9HBH9 465 aa16.25■□□□□ 0.19
CT55-201ENST00000276241 HELLSQ9NRZ9 838 aa16.25■□□□□ 0.19
CT55-201ENST00000276241 A0A1W2PRG0 241 aa16.24■□□□□ 0.19
CT55-201ENST00000276241 PRDM1O75626 825 aa16.24■□□□□ 0.19
CT55-201ENST00000276241 VCAM1P19320 739 aa16.24■□□□□ 0.19
CT55-201ENST00000276241 ATP2B2Q01814 1243 aa16.24■□□□□ 0.19
CT55-201ENST00000276241 FAM110CQ1W6H9 321 aa16.24■□□□□ 0.19
CT55-201ENST00000276241 VPS53Q5VIR6 699 aa16.24■□□□□ 0.19
CT55-201ENST00000276241 C12orf42Q96LP6 360 aa16.24■□□□□ 0.19
CT55-201ENST00000276241 ARHGEF10LQ9HCE6 1279 aa16.24■□□□□ 0.19
CT55-201ENST00000276241 MYPNQ86TC9 1320 aa16.24■□□□□ 0.19
CT55-201ENST00000276241 RASA1P20936 1047 aa16.23■□□□□ 0.19
CT55-201ENST00000276241 HOXA7P31268 230 aaPredicted RBP16.23■□□□□ 0.19
CT55-201ENST00000276241 GCLCP48506 637 aaPredicted RBP16.23■□□□□ 0.19
CT55-201ENST00000276241 HERVK_113P62684 666 aa16.23■□□□□ 0.19
CT55-201ENST00000276241 PPARAQ07869 468 aa16.23■□□□□ 0.19
CT55-201ENST00000276241 MCMDC2Q4G0Z9 681 aa16.23■□□□□ 0.19
CT55-201ENST00000276241 ZNF589Q86UQ0 364 aaPredicted RBP16.23■□□□□ 0.19
CT55-201ENST00000276241 TNPO2O14787 897 aaKnown RBP16.22■□□□□ 0.19
CT55-201ENST00000276241 FOXP2O15409 715 aa16.22■□□□□ 0.19
CT55-201ENST00000276241 PEX10O60683 326 aa16.22■□□□□ 0.19
CT55-201ENST00000276241 GNRH1P01148 92 aa16.22■□□□□ 0.19
CT55-201ENST00000276241 SDSP20132 328 aa16.22■□□□□ 0.19
CT55-201ENST00000276241 PRKCZQ05513 592 aa16.22■□□□□ 0.19
CT55-201ENST00000276241 P2RX7Q99572 595 aaKnown RBP16.22■□□□□ 0.19
CT55-201ENST00000276241 PAGR1Q9BTK6 254 aa16.22■□□□□ 0.19
CT55-201ENST00000276241 RPAP3Q9H6T3 665 aaPredicted RBP16.22■□□□□ 0.19
CT55-201ENST00000276241 SH2D4AQ9H788 454 aa16.22■□□□□ 0.19
CT55-201ENST00000276241 DIAPH3Q9NSV4 1193 aa16.22■□□□□ 0.19
CT55-201ENST00000276241 MGAMO43451 1857 aa16.21■□□□□ 0.19
CT55-201ENST00000276241 USP17L15C9J2P7 530 aa16.21■□□□□ 0.19
CT55-201ENST00000276241 USP17L13C9JLJ4 530 aa16.21■□□□□ 0.19
CT55-201ENST00000276241 USP17L11C9JVI0 530 aa16.21■□□□□ 0.19
CT55-201ENST00000276241 USP17L18D6R9N7 530 aa16.21■□□□□ 0.19
CT55-201ENST00000276241 USP17L22D6RA61 530 aa16.21■□□□□ 0.19
CT55-201ENST00000276241 USP17L17D6RBQ6 530 aa16.21■□□□□ 0.19
CT55-201ENST00000276241 USP17L19D6RCP7 530 aa16.21■□□□□ 0.19
CT55-201ENST00000276241 USP17L20D6RJB6 530 aa16.21■□□□□ 0.19
CT55-201ENST00000276241 RAD21O60216 631 aa16.21■□□□□ 0.19
CT55-201ENST00000276241 SLC3A2P08195 630 aaKnown RBP16.21■□□□□ 0.19
CT55-201ENST00000276241 HOXD10P28358 340 aa16.21■□□□□ 0.19
CT55-201ENST00000276241 USP17L24Q0WX57 530 aa16.21■□□□□ 0.19
CT55-201ENST00000276241 SLC9C1Q4G0N8 1177 aa16.21■□□□□ 0.19
CT55-201ENST00000276241 TTC22Q5TAA0 569 aa16.21■□□□□ 0.19
CT55-201ENST00000276241 SPICE1Q8N0Z3 855 aa16.21■□□□□ 0.19
CT55-201ENST00000276241 TANGO6Q9C0B7 1094 aa16.21■□□□□ 0.19
CT55-201ENST00000276241 ZNF287Q9HBT7 754 aa16.21■□□□□ 0.19
CT55-201ENST00000276241 SRRDQ9UH36 339 aa16.21■□□□□ 0.19
CT55-201ENST00000276241 CCDC171Q6TFL3 1326 aa16.21■□□□□ 0.19
CT55-201ENST00000276241 GREB1LQ9C091 1923 aaPredicted RBP16.21■□□□□ 0.19
CT55-201ENST00000276241 EEF2P13639 858 aaKnown RBP16.2■□□□□ 0.18
CT55-201ENST00000276241 GSPT1P15170 499 aaKnown RBP16.2■□□□□ 0.18
CT55-201ENST00000276241 CTDSPL2Q05D32 466 aa16.2■□□□□ 0.18
CT55-201ENST00000276241 CWC27Q6UX04 472 aaKnown RBP16.2■□□□□ 0.18
CT55-201ENST00000276241 RAET1EQ8TD07 263 aa16.2■□□□□ 0.18
CT55-201ENST00000276241 SH3TC2Q8TF17 1288 aa16.2■□□□□ 0.18
CT55-201ENST00000276241 KANSL2Q9H9L4 492 aa16.2■□□□□ 0.18
CT55-201ENST00000276241 TXNRD2Q9NNW7 524 aa16.2■□□□□ 0.18
CT55-201ENST00000276241 MYCP01106 439 aaPredicted RBP16.19■□□□□ 0.18
CT55-201ENST00000276241 PRMT2P55345 433 aa16.19■□□□□ 0.18
CT55-201ENST00000276241 PDE4BQ07343 736 aa16.19■□□□□ 0.18
CT55-201ENST00000276241 KIAA1755Q5JYT7 1200 aa16.19■□□□□ 0.18
CT55-201ENST00000276241 SAMD1Q6SPF0 538 aaPredicted RBP16.19■□□□□ 0.18
CT55-201ENST00000276241 CATSPERGQ6ZRH7 1159 aa16.19■□□□□ 0.18
CT55-201ENST00000276241 SIAH1Q8IUQ4 282 aa16.19■□□□□ 0.18
CT55-201ENST00000276241 ZNF444Q8N0Y2 327 aaPredicted RBP16.19■□□□□ 0.18
CT55-201ENST00000276241 GABRQQ9UN88 632 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms