RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 ADGRF5Q8IZF2 1346 aa9.6□□□□□ -0.87
SCUBE3-201ENST00000274938 XPO4Q9C0E2 1151 aaKnown RBP9.6□□□□□ -0.87
SCUBE3-201ENST00000274938 RAB20Q9NX57 234 aa9.6□□□□□ -0.87
SCUBE3-201ENST00000274938 PA2G4Q9UQ80 394 aaKnown RBP9.6□□□□□ -0.87
SCUBE3-201ENST00000274938 KRIT1O00522 736 aa9.6□□□□□ -0.87
SCUBE3-201ENST00000274938 RAD51AP2Q09MP3 1159 aa9.6□□□□□ -0.87
SCUBE3-201ENST00000274938 CASC4Q6P4E1 433 aa9.6□□□□□ -0.87
SCUBE3-201ENST00000274938 HAUS1Q96CS2 278 aa9.6□□□□□ -0.87
SCUBE3-201ENST00000274938 ACTR5Q9H9F9 607 aaPredicted RBP9.6□□□□□ -0.87
SCUBE3-201ENST00000274938 PARD3Q8TEW0 1356 aa9.6□□□□□ -0.87
SCUBE3-201ENST00000274938 LDHBP07195 334 aaKnown RBP9.6□□□□□ -0.87
SCUBE3-201ENST00000274938 MAN1A1P33908 653 aa9.6□□□□□ -0.87
SCUBE3-201ENST00000274938 CA8P35219 290 aa9.6□□□□□ -0.87
SCUBE3-201ENST00000274938 SNX29Q8TEQ0 813 aa9.6□□□□□ -0.87
SCUBE3-201ENST00000274938 RSAD2Q8WXG1 361 aa9.6□□□□□ -0.87
SCUBE3-201ENST00000274938 SETDB2Q96T68 719 aa9.6□□□□□ -0.87
SCUBE3-201ENST00000274938 EFCC1Q9HA90 598 aa9.6□□□□□ -0.87
SCUBE3-201ENST00000274938 XAB2Q9HCS7 855 aaKnown RBP9.6□□□□□ -0.87
SCUBE3-201ENST00000274938 SART1O43290 800 aaKnown RBP9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 VAMP4O75379 141 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 RNF8O76064 485 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 ANXA1P04083 346 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 GUCY2FP51841 1108 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 ESRRGP62508 458 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 PPARDQ03181 441 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 CTAGE3PQ8IX95 158 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 LRRC8CQ8TDW0 803 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 JARID2Q92833 1246 aaPredicted RBP9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 IWS1Q96ST2 819 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 MYO1AQ9UBC5 1043 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 ZBTB21Q9ULJ3 1066 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 DNM3Q9UQ16 869 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 USTQ9Y2C2 406 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 RRP15Q9Y3B9 282 aaKnown RBP9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 NUP160Q12769 1436 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 EXOC3O60645 756 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 IL9RQ01113 521 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 HERC4Q5GLZ8 1057 aaPredicted RBP9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 NT5C3AQ9H0P0 336 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 MBD4O95243 580 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 LONRF3Q496Y0 759 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 TYW1BQ6NUM6 668 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 RRAGAQ7L523 313 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 FBXO41Q8TF61 875 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 LRGUKQ96M69 825 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 TM6SF1Q9BZW5 370 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 CCNT1O60563 726 aaKnown RBP9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 N4BP1O75113 896 aaKnown RBP9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 BRD1O95696 1058 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 CLTAP09496 248 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 GARSP41250 739 aaKnown RBP9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 DNM2P50570 870 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 ZNF622Q969S3 477 aaKnown RBP eCLIP9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 SPZ1Q9BXG8 430 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 RXRAP19793 462 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 ADCY7P51828 1080 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 DIXDC1Q155Q3 683 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 TEKT1Q969V4 418 aa9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 ZNF215Q9UL58 517 aaPredicted RBP9.59□□□□□ -0.87
SCUBE3-201ENST00000274938 CDC25BP30305 580 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 PEX19P40855 299 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 STAT1P42224 750 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 PHEXP78562 749 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 KRT40Q6A162 431 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 ADALQ6DHV7 355 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 CABP7Q86V35 215 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 MIGA1Q8NAN2 632 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 SGSM2O43147 1006 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 P4HA1P13674 534 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 ADCY8P40145 1251 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 EYA3Q99504 573 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 ZNF219Q9P2Y4 722 aaPredicted RBP9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 SCOCQ9UIL1 159 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 KDM3AQ9Y4C1 1321 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 TXKP42681 527 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 HADHQ16836 314 aaKnown RBP9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 MIS12Q9H081 205 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 BABAM1Q9NWV8 329 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 PASKQ96RG2 1323 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 SERPINB6P35237 376 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 MUM1L1Q5H9M0 696 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 PDZD4Q76G19 769 aaPredicted RBP9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 CXorf38Q8TB03 319 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 APPBP2Q92624 585 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 WDR70Q9NW82 654 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 IQSEC3Q9UPP2 1182 aaPredicted RBP9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 PIK3C2GO75747 1445 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 KCNK3O14649 394 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 THAP12O43422 761 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 KRT28Q7Z3Y7 464 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 C2CD5Q86YS7 1000 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 PDZD8Q8NEN9 1154 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 U2AF1L4Q8WU68 220 aaKnown RBP9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 ZMAT2Q96NC0 199 aaKnown RBP9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 PFDN6O15212 129 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 JADE1Q6IE81 842 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 PSMB7Q99436 277 aa9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 V9GY48 417 aaPredicted RBP9.58□□□□□ -0.88
SCUBE3-201ENST00000274938 NOS1P29475 1434 aa9.57□□□□□ -0.88
SCUBE3-201ENST00000274938 KCNJ18B7U540 433 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms