RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 KAT2BQ92831 832 aa17.88■□□□□ 0.45
PRPF40B-201ENST00000261897 TUBE1Q9UJT0 475 aa17.88■□□□□ 0.45
PRPF40B-201ENST00000261897 KRT14P02533 472 aa17.88■□□□□ 0.45
PRPF40B-201ENST00000261897 CKAP4Q07065 602 aaKnown RBP17.88■□□□□ 0.45
PRPF40B-201ENST00000261897 RESP18Q5W5W9 173 aa17.88■□□□□ 0.45
PRPF40B-201ENST00000261897 MIGA1Q8NAN2 632 aa17.88■□□□□ 0.45
PRPF40B-201ENST00000261897 HPCAL4Q9UM19 191 aa17.88■□□□□ 0.45
PRPF40B-201ENST00000261897 DUSP10Q9Y6W6 482 aa17.88■□□□□ 0.45
PRPF40B-201ENST00000261897 CEP85LQ5SZL2 805 aa17.87■□□□□ 0.45
PRPF40B-201ENST00000261897 APOA5Q6Q788 366 aa17.87■□□□□ 0.45
PRPF40B-201ENST00000261897 CCDC121Q6ZUS5 278 aa17.87■□□□□ 0.45
PRPF40B-201ENST00000261897 OXER1Q8TDS5 423 aa17.87■□□□□ 0.45
PRPF40B-201ENST00000261897 CCDC42Q96M95 316 aa17.87■□□□□ 0.45
PRPF40B-201ENST00000261897 MYBL2P10244 700 aa17.87■□□□□ 0.45
PRPF40B-201ENST00000261897 XBP1P17861 261 aa17.87■□□□□ 0.45
PRPF40B-201ENST00000261897 SPATA1Q5VX52 437 aa17.87■□□□□ 0.45
PRPF40B-201ENST00000261897 IQCEQ6IPM2 695 aa17.87■□□□□ 0.45
PRPF40B-201ENST00000261897 CABS1Q96KC9 395 aa17.87■□□□□ 0.45
PRPF40B-201ENST00000261897 METTL22Q9BUU2 404 aaPredicted RBP17.87■□□□□ 0.45
PRPF40B-201ENST00000261897 BAZ2BQ9UIF8 2168 aaKnown RBP17.87■□□□□ 0.45
PRPF40B-201ENST00000261897 COG1Q8WTW3 980 aa17.87■□□□□ 0.45
PRPF40B-201ENST00000261897 ABCF2Q9UG63 623 aa17.87■□□□□ 0.45
PRPF40B-201ENST00000261897 BAIAP2L1Q9UHR4 511 aa17.87■□□□□ 0.45
PRPF40B-201ENST00000261897 CEP83Q9Y592 693 aa17.87■□□□□ 0.45
PRPF40B-201ENST00000261897 TRIM49BA6NDI0 452 aa17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 BUB1O43683 1085 aa17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 OPA1O60313 960 aa17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 GYPCP04921 128 aa17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 KRT31Q15323 416 aa17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 POTEDQ86YR6 584 aa17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 PROCA1Q8NCQ7 364 aaPredicted RBP17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 MMRN2Q9H8L6 949 aa17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 SLC4A4Q9Y6R1 1079 aa17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 ARHGEF28Q8N1W1 1705 aaKnown RBP17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 DLG5Q8TDM6 1919 aa17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 USP32Q8NFA0 1604 aa17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 RANBP6O60518 1105 aaKnown RBP17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 SKAP2O75563 359 aaPredicted RBP17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 APBA1Q02410 837 aa17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 NELFBQ8WX92 580 aa17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 ODF2LQ9ULJ1 636 aa17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 CEP131Q9UPN4 1083 aa17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 PPP1R12BO60237 982 aaPredicted RBP17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 NDUFA10O95299 355 aa17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 CCDC178Q5BJE1 867 aa17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 TYW1BQ6NUM6 668 aa17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 KRT26Q7Z3Y9 468 aa17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 PNMA8AQ86V59 439 aaPredicted RBP17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 SYMPKQ92797 1274 aaKnown RBP17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 ROBO2Q9HCK4 1378 aa17.86■□□□□ 0.45
PRPF40B-201ENST00000261897 KCNJ18B7U540 433 aa17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 ERVK-24P63145 666 aa17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 KCNJ12Q14500 433 aa17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 C8orf74Q6P047 294 aa17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 CYB5R4Q7L1T6 521 aa17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 ARHGEF25Q86VW2 580 aa17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 KLHL7Q8IXQ5 586 aa17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 XAGE2Q96GT9 111 aa17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 CCDC43Q96MW1 224 aaKnown RBP17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 PANX2Q96RD6 677 aa17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 SCARF1Q14162 830 aa17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 KSR1Q8IVT5 923 aa17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 HPS5Q9UPZ3 1129 aa17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 CYLC1P35663 651 aaPredicted RBP17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 USP14P54578 494 aa17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 WTAPQ15007 396 aa17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 TTF1Q15361 905 aaPredicted RBP17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 KANK3Q6NY19 840 aa17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 ZNF790Q6PG37 636 aa17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 HDAC7Q8WUI4 952 aa17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 FAM89AQ96GI7 184 aa17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 ALDH8A1Q9H2A2 487 aaPredicted RBP17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 COPRSQ9NQ92 184 aa17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 SEC31BQ9NQW1 1179 aa17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 FAM207AQ9NSI2 230 aaPredicted RBP17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 ABHD10Q9NUJ1 306 aa17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 GDAQ9Y2T3 454 aa17.85■□□□□ 0.45
PRPF40B-201ENST00000261897 CD44P16070 742 aaKnown RBP17.84■□□□□ 0.45
PRPF40B-201ENST00000261897 CABP4P57796 275 aa17.84■□□□□ 0.45
PRPF40B-201ENST00000261897 TBC1D8BQ0IIM8 1120 aa17.84■□□□□ 0.45
PRPF40B-201ENST00000261897 PPFIA1Q13136 1202 aa17.84■□□□□ 0.45
PRPF40B-201ENST00000261897 LDHAL6AQ6ZMR3 332 aa17.84■□□□□ 0.45
PRPF40B-201ENST00000261897 MICALCLQ6ZW33 695 aa17.84■□□□□ 0.45
PRPF40B-201ENST00000261897 ARL8AQ96BM9 186 aa17.84■□□□□ 0.45
PRPF40B-201ENST00000261897 TACO1Q9BSH4 297 aaKnown RBP17.84■□□□□ 0.45
PRPF40B-201ENST00000261897 KAT6BQ8WYB5 2073 aa17.84■□□□□ 0.45
PRPF40B-201ENST00000261897 COPB1P53618 953 aaKnown RBP17.84■□□□□ 0.45
PRPF40B-201ENST00000261897 NR1I3Q14994 352 aa17.84■□□□□ 0.45
PRPF40B-201ENST00000261897 OR8K1Q8NGG5 319 aa17.84■□□□□ 0.45
PRPF40B-201ENST00000261897 CLGNO14967 610 aa17.84■□□□□ 0.45
PRPF40B-201ENST00000261897 ANTXR2P58335 489 aa17.84■□□□□ 0.45
PRPF40B-201ENST00000261897 SF3B2Q13435 895 aaKnown RBP17.84■□□□□ 0.45
PRPF40B-201ENST00000261897 MORC3Q14149 939 aa17.84■□□□□ 0.45
PRPF40B-201ENST00000261897 KCND1Q9NSA2 647 aa17.84■□□□□ 0.45
PRPF40B-201ENST00000261897 NCK2O43639 380 aa17.83■□□□□ 0.45
PRPF40B-201ENST00000261897 PPP6R2O75170 966 aa17.83■□□□□ 0.45
PRPF40B-201ENST00000261897 VAV2P52735 878 aa17.83■□□□□ 0.45
PRPF40B-201ENST00000261897 NNTQ13423 1086 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms