RNA–Protein interactions for RNA: ENST00000261769.9

CDH1-201, Transcript of cadherin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH1, Length 4,889 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-201ENST00000261769 CNGA1P29973 690 aa15.64■□□□□ 0.09
CDH1-201ENST00000261769 DNA2P51530 1060 aa15.64■□□□□ 0.09
CDH1-201ENST00000261769 FAM160A1Q05DH4 1040 aa15.64■□□□□ 0.09
CDH1-201ENST00000261769 ANO6Q4KMQ2 910 aa15.64■□□□□ 0.09
CDH1-201ENST00000261769 NEK11Q8NG66 645 aa15.64■□□□□ 0.09
CDH1-201ENST00000261769 ADD2P35612 726 aa15.63■□□□□ 0.09
CDH1-201ENST00000261769 PDE4DQ08499 809 aa15.63■□□□□ 0.09
CDH1-201ENST00000261769 C2orf69Q8N8R5 385 aa15.63■□□□□ 0.09
CDH1-201ENST00000261769 MCM3P25205 808 aa15.63■□□□□ 0.09
CDH1-201ENST00000261769 CENPHQ9H3R5 247 aa15.63■□□□□ 0.09
CDH1-201ENST00000261769 SPATA31A5Q5VU36 1347 aa15.63■□□□□ 0.09
CDH1-201ENST00000261769 SPATA31A7Q8IWB4 1347 aa15.63■□□□□ 0.09
CDH1-201ENST00000261769 EZRP15311 586 aaKnown RBP15.63■□□□□ 0.09
CDH1-201ENST00000261769 PPM1FP49593 454 aaPredicted RBP15.63■□□□□ 0.09
CDH1-201ENST00000261769 FAM47CQ5HY64 1035 aa15.63■□□□□ 0.09
CDH1-201ENST00000261769 VPS54Q9P1Q0 977 aa15.63■□□□□ 0.09
CDH1-201ENST00000261769 KCNH3Q9ULD8 1083 aa15.63■□□□□ 0.09
CDH1-201ENST00000261769 PRPF4BQ13523 1007 aaKnown RBP15.63■□□□□ 0.09
CDH1-201ENST00000261769 NFIXQ14938 502 aa15.63■□□□□ 0.09
CDH1-201ENST00000261769 LRSAM1Q6UWE0 723 aa15.63■□□□□ 0.09
CDH1-201ENST00000261769 TICAM2Q86XR7 235 aa15.63■□□□□ 0.09
CDH1-201ENST00000261769 RNF181Q9P0P0 153 aa15.63■□□□□ 0.09
CDH1-201ENST00000261769 ADD3Q9UEY8 706 aaKnown RBP15.63■□□□□ 0.09
CDH1-201ENST00000261769 MED14O60244 1454 aa15.63■□□□□ 0.09
CDH1-201ENST00000261769 TRIM28Q13263 835 aaKnown RBP15.62■□□□□ 0.09
CDH1-201ENST00000261769 MIER3Q7Z3K6 550 aa15.62■□□□□ 0.09
CDH1-201ENST00000261769 ZSCAN30Q86W11 494 aa15.62■□□□□ 0.09
CDH1-201ENST00000261769 SLC16A10Q8TF71 515 aa15.62■□□□□ 0.09
CDH1-201ENST00000261769 URI1O94763 535 aaPredicted RBP15.62■□□□□ 0.09
CDH1-201ENST00000261769 CCDC117Q8IWD4 279 aaPredicted RBP15.62■□□□□ 0.09
CDH1-201ENST00000261769 FRMPD2Q68DX3 1309 aaPredicted RBP15.62■□□□□ 0.09
CDH1-201ENST00000261769 ABCA6Q8N139 1617 aa15.62■□□□□ 0.09
CDH1-201ENST00000261769 CETN3O15182 167 aa15.62■□□□□ 0.09
CDH1-201ENST00000261769 BLIDQ8IZY5 108 aa15.62■□□□□ 0.09
CDH1-201ENST00000261769 IWS1Q96ST2 819 aa15.62■□□□□ 0.09
CDH1-201ENST00000261769 PCDHA1Q9Y5I3 950 aa15.62■□□□□ 0.09
CDH1-201ENST00000261769 KDM2BQ8NHM5 1336 aa15.62■□□□□ 0.09
CDH1-201ENST00000261769 CROCC2H7BZ55 1655 aa15.62■□□□□ 0.09
CDH1-201ENST00000261769 ADCY5O95622 1261 aa15.62■□□□□ 0.09
CDH1-201ENST00000261769 ZNF771Q7L3S4 317 aaPredicted RBP15.62■□□□□ 0.09
CDH1-201ENST00000261769 PNMA3Q9UL41 463 aa15.62■□□□□ 0.09
CDH1-201ENST00000261769 IQCA1LA6NCM1 817 aa15.61■□□□□ 0.09
CDH1-201ENST00000261769 TRPC3Q13507 836 aa15.61■□□□□ 0.09
CDH1-201ENST00000261769 TAX1BP1Q86VP1 789 aa15.61■□□□□ 0.09
CDH1-201ENST00000261769 SYNE4Q8N205 404 aa15.61■□□□□ 0.09
CDH1-201ENST00000261769 AOPEPQ8N6M6 819 aa15.61■□□□□ 0.09
CDH1-201ENST00000261769 CEP170BQ9Y4F5 1589 aaPredicted RBP15.61■□□□□ 0.09
CDH1-201ENST00000261769 CALUO43852 315 aaPredicted RBP15.61■□□□□ 0.09
CDH1-201ENST00000261769 LPXNO60711 386 aa15.61■□□□□ 0.09
CDH1-201ENST00000261769 SCG2P13521 617 aa15.61■□□□□ 0.09
CDH1-201ENST00000261769 HERC4Q5GLZ8 1057 aaPredicted RBP15.61■□□□□ 0.09
CDH1-201ENST00000261769 CEP135Q66GS9 1140 aa15.61■□□□□ 0.09
CDH1-201ENST00000261769 DPH6Q7L8W6 267 aa15.61■□□□□ 0.09
CDH1-201ENST00000261769 MINPP1Q9UNW1 487 aa15.61■□□□□ 0.09
CDH1-201ENST00000261769 KCNJ14Q9UNX9 436 aa15.61■□□□□ 0.09
CDH1-201ENST00000261769 PTPRUQ92729 1446 aa15.61■□□□□ 0.09
CDH1-201ENST00000261769 GRIN3BO60391 1043 aa15.61■□□□□ 0.09
CDH1-201ENST00000261769 ZSCAN23Q3MJ62 389 aa15.61■□□□□ 0.09
CDH1-201ENST00000261769 MAP7D2Q96T17 732 aa15.61■□□□□ 0.09
CDH1-201ENST00000261769 ZNF521Q96K83 1311 aa15.61■□□□□ 0.09
CDH1-201ENST00000261769 KDM3AQ9Y4C1 1321 aa15.61■□□□□ 0.09
CDH1-201ENST00000261769 E9PCH4 1651 aa15.61■□□□□ 0.09
CDH1-201ENST00000261769 PPRC1Q5VV67 1664 aaKnown RBP15.61■□□□□ 0.09
CDH1-201ENST00000261769 ESPNB1AK53 854 aa15.61■□□□□ 0.09
CDH1-201ENST00000261769 MAP9Q49MG5 647 aa15.61■□□□□ 0.09
CDH1-201ENST00000261769 ISCA1Q9BUE6 129 aa15.61■□□□□ 0.09
CDH1-201ENST00000261769 OSBPL3Q9H4L5 887 aa15.61■□□□□ 0.09
CDH1-201ENST00000261769 RPAP1Q9BWH6 1393 aaPredicted RBP15.6■□□□□ 0.09
CDH1-201ENST00000261769 hCG_1642624A0A1W2PR95 340 aa15.6■□□□□ 0.09
CDH1-201ENST00000261769 PSDA5PKW4 1024 aaPredicted RBP15.6■□□□□ 0.09
CDH1-201ENST00000261769 ASNSP08243 561 aa15.6■□□□□ 0.09
CDH1-201ENST00000261769 SP8Q8IXZ3 490 aa15.6■□□□□ 0.09
CDH1-201ENST00000261769 MARCH10Q8NA82 808 aaPredicted RBP15.6■□□□□ 0.09
CDH1-201ENST00000261769 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.6■□□□□ 0.09
CDH1-201ENST00000261769 SETD1BQ9UPS6 1966 aaKnown RBP15.6■□□□□ 0.09
CDH1-201ENST00000261769 A0A1B0GVL5 298 aa15.6■□□□□ 0.09
CDH1-201ENST00000261769 STX17P56962 302 aa15.6■□□□□ 0.09
CDH1-201ENST00000261769 SLFN12Q8IYM2 578 aa15.6■□□□□ 0.09
CDH1-201ENST00000261769 LMBR1Q8WVP7 490 aa15.6■□□□□ 0.09
CDH1-201ENST00000261769 DNAJC25Q9H1X3 360 aa15.6■□□□□ 0.09
CDH1-201ENST00000261769 ZC3H13Q5T200 1668 aaKnown RBP15.6■□□□□ 0.09
CDH1-201ENST00000261769 DYNLL1P63167 89 aaKnown RBP15.6■□□□□ 0.09
CDH1-201ENST00000261769 RASGRF1Q13972 1273 aa15.6■□□□□ 0.09
CDH1-201ENST00000261769 R3HDM1Q15032 1099 aaKnown RBP15.6■□□□□ 0.09
CDH1-201ENST00000261769 GTF3C6Q969F1 213 aa15.6■□□□□ 0.09
CDH1-201ENST00000261769 PALD1Q9ULE6 856 aa15.6■□□□□ 0.09
CDH1-201ENST00000261769 ZMYM6O95789 1325 aa15.6■□□□□ 0.09
CDH1-201ENST00000261769 BMP3P12645 472 aa15.6■□□□□ 0.09
CDH1-201ENST00000261769 DCAF17Q5H9S7 520 aaPredicted RBP15.6■□□□□ 0.09
CDH1-201ENST00000261769 NBPF3Q9H094 633 aa15.6■□□□□ 0.09
CDH1-201ENST00000261769 CD209Q9NNX6 404 aa15.6■□□□□ 0.09
CDH1-201ENST00000261769 TRPC6Q9Y210 931 aa15.6■□□□□ 0.09
CDH1-201ENST00000261769 IGKV5-2P06315 115 aa15.59■□□□□ 0.09
CDH1-201ENST00000261769 DIXDC1Q155Q3 683 aa15.59■□□□□ 0.09
CDH1-201ENST00000261769 HSP90AA4PQ58FG1 418 aa15.59■□□□□ 0.09
CDH1-201ENST00000261769 GOLGA6L10A0A0M3HER8 536 aa15.59■□□□□ 0.09
CDH1-201ENST00000261769 PTH1RQ03431 593 aa15.59■□□□□ 0.09
CDH1-201ENST00000261769 TYRO3Q06418 890 aa15.59■□□□□ 0.09
CDH1-201ENST00000261769 CABP7Q86V35 215 aa15.59■□□□□ 0.09
CDH1-201ENST00000261769 ZNF354CQ86Y25 554 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms