RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 HAUS7Q99871 368 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 TCHPQ9BT92 498 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 TROVE2P10155 538 aaKnown RBP eCLIP5.31□□□□□ -1.56
RC3H1-201ENST00000258349 ZNF174Q15697 407 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 CHST3Q7LGC8 479 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 DDX27Q96GQ7 796 aaKnown RBP5.31□□□□□ -1.56
RC3H1-201ENST00000258349 PPP1R12CQ9BZL4 782 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 DENND2AQ9ULE3 1009 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 EIF3CLB5ME19 914 aaKnown RBP5.31□□□□□ -1.56
RC3H1-201ENST00000258349 DKC1O60832 514 aaKnown RBP eCLIP5.31□□□□□ -1.56
RC3H1-201ENST00000258349 KIF11P52732 1056 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 PDE4DQ08499 809 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 BIRC3Q13489 604 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 RASEFQ8IZ41 740 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 EIF3CQ99613 913 aaKnown RBP5.31□□□□□ -1.56
RC3H1-201ENST00000258349 TMOD4Q9NZQ9 345 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 RGS12O14924 1447 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 ZNF500O60304 480 aaPredicted RBP5.31□□□□□ -1.56
RC3H1-201ENST00000258349 C8orf58Q8NAV2 365 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 HAUS1Q96CS2 278 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 N4BP1O75113 896 aaKnown RBP5.31□□□□□ -1.56
RC3H1-201ENST00000258349 RNF40O75150 1001 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 KRT9P35527 623 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 ZBTB17Q13105 803 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 RASA3Q14644 834 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 CCDC105Q8IYK2 499 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 KLHL14Q9P2G3 628 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 ATP10BO94823 1461 aa5.31□□□□□ -1.56
RC3H1-201ENST00000258349 KRT28Q7Z3Y7 464 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 VSIG1Q86XK7 387 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 MAGEF1Q9HAY2 307 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 KCNG1Q9UIX4 513 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 AMFRQ9UKV5 643 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 SBNO1A3KN83 1393 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 ASXL2Q76L83 1435 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 MTX1Q13505 466 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 COPS6Q7L5N1 327 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 ZCRB1Q8TBF4 217 aaKnown RBP5.3□□□□□ -1.56
RC3H1-201ENST00000258349 MLH3Q9UHC1 1453 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 FMN2Q9NZ56 1722 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 KCNJ18B7U540 433 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 MAN1A1P33908 653 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 PICALMQ13492 652 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 KCNJ12Q14500 433 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 KRT71Q3SY84 523 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 LRCH2Q5VUJ6 765 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 KRT25Q7Z3Z0 450 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 PRPF31Q8WWY3 499 aaKnown RBP5.3□□□□□ -1.56
RC3H1-201ENST00000258349 NLRP3Q96P20 1036 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 CAPS2Q9BXY5 557 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 TSPYL2Q9H2G4 693 aaPredicted RBP5.3□□□□□ -1.56
RC3H1-201ENST00000258349 DDX41Q9UJV9 622 aaKnown RBP5.3□□□□□ -1.56
RC3H1-201ENST00000258349 NCAPGQ9BPX3 1015 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 HIP1RO75146 1068 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 APBA1Q02410 837 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 CUL4BQ13620 913 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 MORC3Q14149 939 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 NBPF14Q5TI25 921 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 CABS1Q96KC9 395 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 HOMER3Q9NSC5 361 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 HOXB7P09629 217 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 EIF4A2Q14240 407 aaKnown RBP5.3□□□□□ -1.56
RC3H1-201ENST00000258349 TRMT1LQ7Z2T5 733 aaKnown RBP5.3□□□□□ -1.56
RC3H1-201ENST00000258349 TTC16Q8NEE8 873 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 RSAD2Q8WXG1 361 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 VPS16Q9H269 839 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 EPS15L1Q9UBC2 864 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 RIPOR2Q9Y4F9 1068 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 ATP10DQ9P241 1426 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 DAPK3O43293 454 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 CTNNA1P35221 906 aaKnown RBP5.3□□□□□ -1.56
RC3H1-201ENST00000258349 DRC3Q9H069 523 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 ANKRD26Q9UPS8 1709 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 MED23Q9ULK4 1368 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 GABPAQ06546 454 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 PRR16Q569H4 304 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 CCDC13Q8IYE1 715 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 LMBRD1Q9NUN5 540 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 GCNT3O95395 438 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 KRT3P12035 628 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 CA8P35219 290 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 ADCY7P51828 1080 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 DMTNQ08495 405 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 DCUN1D2Q6PH85 259 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 CADPS2Q86UW7 1296 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 PNMA8AQ86V59 439 aaPredicted RBP5.3□□□□□ -1.56
RC3H1-201ENST00000258349 CARD6Q9BX69 1037 aa5.3□□□□□ -1.56
RC3H1-201ENST00000258349 ZMYM6O95789 1325 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 MROH5Q6ZUA9 1318 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 ARHGEF35A5YM69 484 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 DNAJC8O75937 253 aaPredicted RBP5.29□□□□□ -1.56
RC3H1-201ENST00000258349 LETM2Q2VYF4 491 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 CASC4Q6P4E1 433 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 RBM17Q96I25 401 aaKnown RBP5.29□□□□□ -1.56
RC3H1-201ENST00000258349 SPZ1Q9BXG8 430 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 NT5C3AQ9H0P0 336 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 CAPN7Q9Y6W3 813 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 E9PCH4 1651 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 MAST3O60307 1309 aa5.29□□□□□ -1.56
RC3H1-201ENST00000258349 PHLPP2Q6ZVD8 1323 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms