RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 ATG3Q9NT62 314 aa15.45■□□□□ 0.06
NCLN-201ENST00000246117 IMPACTQ9P2X3 320 aa15.45■□□□□ 0.06
NCLN-201ENST00000246117 PAFAH1B1P43034 410 aa15.45■□□□□ 0.06
NCLN-201ENST00000246117 TCP10Q12799 353 aa15.45■□□□□ 0.06
NCLN-201ENST00000246117 RTCBQ9Y3I0 505 aaKnown RBP15.45■□□□□ 0.06
NCLN-201ENST00000246117 MROH5Q6ZUA9 1318 aa15.45■□□□□ 0.06
NCLN-201ENST00000246117 CEMIPQ8WUJ3 1361 aa15.45■□□□□ 0.06
NCLN-201ENST00000246117 UFL1O94874 794 aa15.45■□□□□ 0.06
NCLN-201ENST00000246117 ARID4AP29374 1257 aaPredicted RBP15.45■□□□□ 0.06
NCLN-201ENST00000246117 PAK1Q13153 545 aa15.45■□□□□ 0.06
NCLN-201ENST00000246117 WWC2Q6AWC2 1192 aa15.45■□□□□ 0.06
NCLN-201ENST00000246117 PLA2G4DQ86XP0 818 aa15.45■□□□□ 0.06
NCLN-201ENST00000246117 NELFCDQ8IXH7 590 aa15.45■□□□□ 0.06
NCLN-201ENST00000246117 ACRBPQ8NEB7 543 aa15.45■□□□□ 0.06
NCLN-201ENST00000246117 NLRC4Q9NPP4 1024 aa15.45■□□□□ 0.06
NCLN-201ENST00000246117 BIN2Q9UBW5 565 aaPredicted RBP15.45■□□□□ 0.06
NCLN-201ENST00000246117 SRP68Q9UHB9 627 aaKnown RBP15.45■□□□□ 0.06
NCLN-201ENST00000246117 MAN1B1Q9UKM7 699 aa15.45■□□□□ 0.06
NCLN-201ENST00000246117 ADGRB2O60241 1585 aa15.45■□□□□ 0.06
NCLN-201ENST00000246117 CIAO1O76071 339 aa15.44■□□□□ 0.06
NCLN-201ENST00000246117 RBM6P78332 1123 aaKnown RBP15.44■□□□□ 0.06
NCLN-201ENST00000246117 IQCB1Q15051 598 aa15.44■□□□□ 0.06
NCLN-201ENST00000246117 DHX40Q8IX18 779 aaKnown RBP15.44■□□□□ 0.06
NCLN-201ENST00000246117 MB21D2Q8IYB1 491 aaPredicted RBP15.44■□□□□ 0.06
NCLN-201ENST00000246117 SMARCC2Q8TAQ2 1214 aa15.44■□□□□ 0.06
NCLN-201ENST00000246117 TAF4BQ92750 862 aa15.44■□□□□ 0.06
NCLN-201ENST00000246117 CCDC113Q9H0I3 377 aa15.44■□□□□ 0.06
NCLN-201ENST00000246117 PKD2L1Q9P0L9 805 aa15.44■□□□□ 0.06
NCLN-201ENST00000246117 DEPDC5O75140 1603 aa15.44■□□□□ 0.06
NCLN-201ENST00000246117 NPHP4O75161 1426 aaPredicted RBP15.44■□□□□ 0.06
NCLN-201ENST00000246117 LDHCP07864 332 aa15.44■□□□□ 0.06
NCLN-201ENST00000246117 USP17L8P0C7I0 530 aa15.44■□□□□ 0.06
NCLN-201ENST00000246117 USPL1Q5W0Q7 1092 aa15.44■□□□□ 0.06
NCLN-201ENST00000246117 SHC4Q6S5L8 630 aa15.44■□□□□ 0.06
NCLN-201ENST00000246117 ZCCHC17Q9NP64 241 aaKnown RBP15.44■□□□□ 0.06
NCLN-201ENST00000246117 FRMPD2Q68DX3 1309 aaPredicted RBP15.44■□□□□ 0.06
NCLN-201ENST00000246117 EXOSC10Q01780 885 aaKnown RBP15.44■□□□□ 0.06
NCLN-201ENST00000246117 ERFEQ4G0M1 354 aa15.44■□□□□ 0.06
NCLN-201ENST00000246117 C10orf67Q8IYJ2 551 aa15.44■□□□□ 0.06
NCLN-201ENST00000246117 NOC4LQ9BVI4 516 aaKnown RBP15.44■□□□□ 0.06
NCLN-201ENST00000246117 CARD10Q9BWT7 1032 aa15.44■□□□□ 0.06
NCLN-201ENST00000246117 GPR108Q9NPR9 543 aa15.44■□□□□ 0.06
NCLN-201ENST00000246117 ATP2C2O75185 946 aa15.43■□□□□ 0.06
NCLN-201ENST00000246117 CALM1P0DP23 149 aa15.43■□□□□ 0.06
NCLN-201ENST00000246117 CALM2P0DP24 149 aa15.43■□□□□ 0.06
NCLN-201ENST00000246117 CALM3P0DP25 149 aa15.43■□□□□ 0.06
NCLN-201ENST00000246117 ANTXR2P58335 489 aa15.43■□□□□ 0.06
NCLN-201ENST00000246117 KIF5AQ12840 1032 aa15.43■□□□□ 0.06
NCLN-201ENST00000246117 MTF1Q14872 753 aa15.43■□□□□ 0.06
NCLN-201ENST00000246117 RMND1Q9NWS8 449 aa15.43■□□□□ 0.06
NCLN-201ENST00000246117 MED23Q9ULK4 1368 aa15.43■□□□□ 0.06
NCLN-201ENST00000246117 CALML3P27482 149 aa15.43■□□□□ 0.06
NCLN-201ENST00000246117 RABL6Q3YEC7 729 aaPredicted RBP15.43■□□□□ 0.06
NCLN-201ENST00000246117 PNMA1Q8ND90 353 aa15.43■□□□□ 0.06
NCLN-201ENST00000246117 IFT81Q8WYA0 676 aa15.43■□□□□ 0.06
NCLN-201ENST00000246117 SPAG5Q96R06 1193 aa15.43■□□□□ 0.06
NCLN-201ENST00000246117 TSG101Q99816 390 aa15.43■□□□□ 0.06
NCLN-201ENST00000246117 OAS2P29728 719 aaKnown RBP15.43■□□□□ 0.06
NCLN-201ENST00000246117 PRDX5P30044 214 aa15.43■□□□□ 0.06
NCLN-201ENST00000246117 TECP42680 631 aa15.43■□□□□ 0.06
NCLN-201ENST00000246117 SPAG1Q07617 926 aa15.43■□□□□ 0.06
NCLN-201ENST00000246117 CNGA4Q8IV77 575 aa15.43■□□□□ 0.06
NCLN-201ENST00000246117 SLC44A5Q8NCS7 719 aa15.42■□□□□ 0.06
NCLN-201ENST00000246117 RAB34Q9BZG1 259 aa15.42■□□□□ 0.06
NCLN-201ENST00000246117 TRAF5O00463 557 aa15.42■□□□□ 0.06
NCLN-201ENST00000246117 BMP15O95972 392 aa15.42■□□□□ 0.06
NCLN-201ENST00000246117 CYLC1P35663 651 aaPredicted RBP15.42■□□□□ 0.06
NCLN-201ENST00000246117 ARMCX5Q6P1M9 558 aa15.42■□□□□ 0.06
NCLN-201ENST00000246117 SPTLC3Q9NUV7 552 aa15.42■□□□□ 0.06
NCLN-201ENST00000246117 RBL2Q08999 1139 aa15.42■□□□□ 0.06
NCLN-201ENST00000246117 LRRC47Q8N1G4 583 aaKnown RBP15.42■□□□□ 0.06
NCLN-201ENST00000246117 GOPCQ9HD26 462 aa15.42■□□□□ 0.06
NCLN-201ENST00000246117 CCNL1Q9UK58 526 aaPredicted RBP15.42■□□□□ 0.06
NCLN-201ENST00000246117 TMEM131LA2VDJ0 1609 aa15.42■□□□□ 0.06
NCLN-201ENST00000246117 DLC1Q96QB1 1528 aa15.42■□□□□ 0.06
NCLN-201ENST00000246117 PXDNQ92626 1479 aa15.42■□□□□ 0.06
NCLN-201ENST00000246117 ADGRL3Q9HAR2 1447 aa15.42■□□□□ 0.06
NCLN-201ENST00000246117 USP42Q9H9J4 1324 aaKnown RBP15.41■□□□□ 0.06
NCLN-201ENST00000246117 USP17L3A6NCW0 530 aa15.41■□□□□ 0.06
NCLN-201ENST00000246117 USP17L4A6NCW7 530 aa15.41■□□□□ 0.06
NCLN-201ENST00000246117 TEX33O43247 280 aa15.41■□□□□ 0.06
NCLN-201ENST00000246117 KCNQ2O43526 872 aa15.41■□□□□ 0.06
NCLN-201ENST00000246117 MMP1P03956 469 aa15.41■□□□□ 0.06
NCLN-201ENST00000246117 SSR1P43307 286 aaKnown RBP15.41■□□□□ 0.06
NCLN-201ENST00000246117 AMPD3Q01432 767 aa15.41■□□□□ 0.06
NCLN-201ENST00000246117 USP17L1Q7RTZ2 530 aa15.41■□□□□ 0.06
NCLN-201ENST00000246117 GBP3Q9H0R5 595 aa15.41■□□□□ 0.06
NCLN-201ENST00000246117 ZYXQ15942 572 aaKnown RBP15.41■□□□□ 0.06
NCLN-201ENST00000246117 PARP10Q53GL7 1025 aa15.41■□□□□ 0.06
NCLN-201ENST00000246117 FCHSD1Q86WN1 690 aa15.41■□□□□ 0.06
NCLN-201ENST00000246117 TIGD1Q96MW7 591 aa15.41■□□□□ 0.06
NCLN-201ENST00000246117 GTPBP4Q9BZE4 634 aaKnown RBP15.41■□□□□ 0.06
NCLN-201ENST00000246117 POLD4Q9HCU8 107 aa15.41■□□□□ 0.06
NCLN-201ENST00000246117 CALCOCO1Q9P1Z2 691 aa15.41■□□□□ 0.06
NCLN-201ENST00000246117 ANKARQ7Z5J8 1434 aa15.41■□□□□ 0.06
NCLN-201ENST00000246117 UBN2Q6ZU65 1347 aa15.41■□□□□ 0.06
NCLN-201ENST00000246117 SYCP1Q15431 976 aa15.41■□□□□ 0.06
NCLN-201ENST00000246117 ZNF710Q8N1W2 664 aa15.41■□□□□ 0.06
NCLN-201ENST00000246117 C6orf50Q9HD87 102 aa15.41■□□□□ 0.06
NCLN-201ENST00000246117 SLC39A2Q9NP94 309 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms