RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 E2F5Q15329 346 aa15.35■□□□□ 0.05
HCFC2-201ENST00000229330 DENND2CQ68D51 928 aa15.35■□□□□ 0.05
HCFC2-201ENST00000229330 KCTD16Q68DU8 428 aa15.35■□□□□ 0.05
HCFC2-201ENST00000229330 FERMT2Q96AC1 680 aa15.35■□□□□ 0.05
HCFC2-201ENST00000229330 ZKSCAN3Q9BRR0 538 aa15.35■□□□□ 0.05
HCFC2-201ENST00000229330 EPN1Q9Y6I3 576 aaPredicted RBP15.35■□□□□ 0.05
HCFC2-201ENST00000229330 MAGI2Q86UL8 1455 aa15.35■□□□□ 0.05
HCFC2-201ENST00000229330 KCNJ18B7U540 433 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 KCNJ12Q14500 433 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 MUM1Q2TAK8 710 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 SARM1Q6SZW1 724 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 VCX3BQ9H321 246 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 FERP16591 822 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 TTC38Q5R3I4 469 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 CCDC63Q8NA47 563 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 RTEL1Q9NZ71 1219 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 CFAP74Q9C0B2 1584 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 C6orf229H3BNL8 230 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 RGS16O15492 202 aaPredicted RBP15.34■□□□□ 0.05
HCFC2-201ENST00000229330 TSPY3P0CV98 308 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 TSPY8P0CW00 308 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 SLC4A8Q2Y0W8 1093 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 CC2D1AQ6P1N0 951 aaPredicted RBP15.34■□□□□ 0.05
HCFC2-201ENST00000229330 ARHGAP24Q8N264 748 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 ABCB6Q9NP58 842 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 NOL3O60936 208 aaKnown RBP15.34■□□□□ 0.05
HCFC2-201ENST00000229330 LTKP29376 864 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 RASSF2P50749 326 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 ADCK5Q3MIX3 580 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 NBPF6Q5VWK0 638 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 SPATA1Q5VX52 437 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 CCDC84Q86UT8 332 aaPredicted RBP15.34■□□□□ 0.05
HCFC2-201ENST00000229330 NBPF5PQ86XG9 351 aaPredicted RBP15.34■□□□□ 0.05
HCFC2-201ENST00000229330 CRACR2BQ8N4Y2 399 aaPredicted RBP15.34■□□□□ 0.05
HCFC2-201ENST00000229330 NBPF4Q96M43 638 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 TSNARE1Q96NA8 513 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 ARID5BQ14865 1188 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 DSCC1Q9BVC3 393 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 BABAM1Q9NWV8 329 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 TTC37Q6PGP7 1564 aa15.34■□□□□ 0.05
HCFC2-201ENST00000229330 ZBTB22O15209 634 aa15.33■□□□□ 0.05
HCFC2-201ENST00000229330 CCDC110Q8TBZ0 833 aa15.33■□□□□ 0.05
HCFC2-201ENST00000229330 GJC1P36383 396 aa15.33■□□□□ 0.04
HCFC2-201ENST00000229330 PLCB3Q01970 1234 aa15.33■□□□□ 0.04
HCFC2-201ENST00000229330 CEP128Q6ZU80 1094 aa15.33■□□□□ 0.04
HCFC2-201ENST00000229330 EHMT1Q9H9B1 1298 aa15.33■□□□□ 0.04
HCFC2-201ENST00000229330 A0A0D9SFI3 127 aa15.33■□□□□ 0.04
HCFC2-201ENST00000229330 PLEKHG3A1L390 1219 aa15.33■□□□□ 0.04
HCFC2-201ENST00000229330 EEF2P13639 858 aaKnown RBP15.33■□□□□ 0.04
HCFC2-201ENST00000229330 ZNF827Q17R98 1081 aa15.33■□□□□ 0.04
HCFC2-201ENST00000229330 C2CD5Q86YS7 1000 aa15.33■□□□□ 0.04
HCFC2-201ENST00000229330 CLIC4Q9Y696 253 aa15.33■□□□□ 0.04
HCFC2-201ENST00000229330 PCDH11XQ9BZA7 1347 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 PCDH11YQ9BZA8 1340 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 LRRD1A4D1F6 860 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 BAG3O95817 575 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 ATP2A2P16615 1042 aaKnown RBP15.32■□□□□ 0.04
HCFC2-201ENST00000229330 MORC3Q14149 939 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 PIK3AP1Q6ZUJ8 805 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 SIRT1Q96EB6 747 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 RAB17Q9H0T7 212 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 BLZF1Q9H2G9 400 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 PHLDB2Q86SQ0 1253 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 MAGEB6Q8N7X4 407 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 STAMQ92783 540 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 PLXNC1O60486 1568 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 A0A087WWV3 80 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 TIMM10P62072 90 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 DCAF17Q5H9S7 520 aaPredicted RBP15.32■□□□□ 0.04
HCFC2-201ENST00000229330 KLHDC4Q8TBB5 520 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 ANKRD7Q92527 254 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 C8orf37Q96NL8 207 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 ANKRD65E5RJM6 399 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 LDHCP07864 332 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 CASP14P31944 242 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 EPHB4P54760 987 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 CCDC62Q6P9F0 684 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 VPS52Q8N1B4 723 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 APPBP2Q92624 585 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 KLHL14Q9P2G3 628 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 MAGEB6P1A0A0J9YX57 407 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 SH3BGRP55822 239 aaPredicted RBP15.32■□□□□ 0.04
HCFC2-201ENST00000229330 PLA2G4DQ86XP0 818 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 SYCE1Q8N0S2 351 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 RCOR1Q9UKL0 485 aa15.32■□□□□ 0.04
HCFC2-201ENST00000229330 RPL13P26373 211 aaKnown RBP15.31■□□□□ 0.04
HCFC2-201ENST00000229330 SFMBT2Q5VUG0 894 aa15.31■□□□□ 0.04
HCFC2-201ENST00000229330 RRAGAQ7L523 313 aa15.31■□□□□ 0.04
HCFC2-201ENST00000229330 SLF2Q8IX21 1173 aa15.31■□□□□ 0.04
HCFC2-201ENST00000229330 UBL4BQ8N7F7 174 aa15.31■□□□□ 0.04
HCFC2-201ENST00000229330 STAG1Q8WVM7 1258 aa15.31■□□□□ 0.04
HCFC2-201ENST00000229330 HINFPQ9BQA5 517 aa15.31■□□□□ 0.04
HCFC2-201ENST00000229330 NUCKS1Q9H1E3 243 aaKnown RBP15.31■□□□□ 0.04
HCFC2-201ENST00000229330 CLUL1Q15846 466 aa15.31■□□□□ 0.04
HCFC2-201ENST00000229330 PEX26Q7Z412 305 aa15.31■□□□□ 0.04
HCFC2-201ENST00000229330 UNC5CLQ8IV45 518 aa15.31■□□□□ 0.04
HCFC2-201ENST00000229330 VSTM4Q8IW00 320 aa15.31■□□□□ 0.04
HCFC2-201ENST00000229330 TRIM4Q9C037 500 aa15.31■□□□□ 0.04
HCFC2-201ENST00000229330 ACTR5Q9H9F9 607 aaPredicted RBP15.31■□□□□ 0.04
HCFC2-201ENST00000229330 HOMER3Q9NSC5 361 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms