RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 ZNF622Q969S3 477 aaKnown RBP eCLIP13.96□□□□□ -0.171e-6■■□□□ 11.5
TM9SF4-201ENST00000217315 TSG101Q99816 390 aa13.96□□□□□ -0.17
TM9SF4-201ENST00000217315 LUC7LQ9NQ29 371 aaKnown RBP13.96□□□□□ -0.17
TM9SF4-201ENST00000217315 ARPP21Q9UBL0 812 aaPredicted RBP13.96□□□□□ -0.17
TM9SF4-201ENST00000217315 UBN2Q6ZU65 1347 aa13.96□□□□□ -0.17
TM9SF4-201ENST00000217315 AP5Z1O43299 807 aa13.96□□□□□ -0.17
TM9SF4-201ENST00000217315 KCNQ2O43526 872 aa13.96□□□□□ -0.17
TM9SF4-201ENST00000217315 HLA-DOAP06340 250 aa13.96□□□□□ -0.17
TM9SF4-201ENST00000217315 EVCP57679 992 aa13.96□□□□□ -0.17
TM9SF4-201ENST00000217315 IQCB1Q15051 598 aa13.96□□□□□ -0.17
TM9SF4-201ENST00000217315 AXDND1Q5T1B0 1012 aaPredicted RBP13.96□□□□□ -0.17
TM9SF4-201ENST00000217315 CNGA4Q8IV77 575 aa13.96□□□□□ -0.17
TM9SF4-201ENST00000217315 SMYD4Q8IYR2 804 aaPredicted RBP13.96□□□□□ -0.17
TM9SF4-201ENST00000217315 GUCA1BQ9UMX6 200 aa13.96□□□□□ -0.17
TM9SF4-201ENST00000217315 MST1RQ04912 1400 aa13.96□□□□□ -0.17
TM9SF4-201ENST00000217315 ZNF804BA4D1E1 1349 aa13.96□□□□□ -0.18
TM9SF4-201ENST00000217315 IKBKBO14920 756 aa13.96□□□□□ -0.18
TM9SF4-201ENST00000217315 GOLGA8HP0CJ92 632 aa13.96□□□□□ -0.18
TM9SF4-201ENST00000217315 PLCG2P16885 1265 aa13.96□□□□□ -0.18
TM9SF4-201ENST00000217315 CDC25AP30304 524 aa13.96□□□□□ -0.18
TM9SF4-201ENST00000217315 ETF1P62495 437 aaKnown RBP13.96□□□□□ -0.18
TM9SF4-201ENST00000217315 ERCC6LQ2NKX8 1250 aa13.96□□□□□ -0.18
TM9SF4-201ENST00000217315 EEF2KMTQ96G04 330 aa13.96□□□□□ -0.18
TM9SF4-201ENST00000217315 ARFGAP3Q9NP61 516 aa13.96□□□□□ -0.18
TM9SF4-201ENST00000217315 RGPD8O14715 1765 aaPredicted RBP13.96□□□□□ -0.18
TM9SF4-201ENST00000217315 PAK1Q13153 545 aa13.95□□□□□ -0.18
TM9SF4-201ENST00000217315 CCDC40Q4G0X9 1142 aa13.95□□□□□ -0.18
TM9SF4-201ENST00000217315 IL17RAQ96F46 866 aa13.95□□□□□ -0.18
TM9SF4-201ENST00000217315 PLEKHA8P1O95397 391 aa13.95□□□□□ -0.18
TM9SF4-201ENST00000217315 GUCY1A2P33402 732 aa13.95□□□□□ -0.18
TM9SF4-201ENST00000217315 RASGRP4Q8TDF6 673 aa13.95□□□□□ -0.18
TM9SF4-201ENST00000217315 EPSTI1Q96J88 318 aa13.95□□□□□ -0.18
TM9SF4-201ENST00000217315 FEZ1Q99689 392 aa13.95□□□□□ -0.18
TM9SF4-201ENST00000217315 SPTLC3Q9NUV7 552 aa13.95□□□□□ -0.18
TM9SF4-201ENST00000217315 LUC7L2Q9Y383 392 aaKnown RBP13.95□□□□□ -0.18
TM9SF4-201ENST00000217315 AKR1B10O60218 316 aa13.95□□□□□ -0.18
TM9SF4-201ENST00000217315 FAM114A1Q8IWE2 563 aa13.95□□□□□ -0.18
TM9SF4-201ENST00000217315 OXER1Q8TDS5 423 aa13.95□□□□□ -0.18
TM9SF4-201ENST00000217315 STAG1Q8WVM7 1258 aa13.95□□□□□ -0.18
TM9SF4-201ENST00000217315 GPCPD1Q9NPB8 672 aa13.95□□□□□ -0.18
TM9SF4-201ENST00000217315 HPS5Q9UPZ3 1129 aa13.95□□□□□ -0.18
TM9SF4-201ENST00000217315 CCNT1O60563 726 aaKnown RBP13.94□□□□□ -0.18
TM9SF4-201ENST00000217315 FGFR1OPO95684 399 aaKnown RBP13.94□□□□□ -0.18
TM9SF4-201ENST00000217315 MCM6Q14566 821 aa13.94□□□□□ -0.18
TM9SF4-201ENST00000217315 CELF1Q92879 486 aaKnown RBP13.94□□□□□ -0.18
TM9SF4-201ENST00000217315 MMRN2Q9H8L6 949 aa13.94□□□□□ -0.18
TM9SF4-201ENST00000217315 CPDO75976 1380 aa13.94□□□□□ -0.18
TM9SF4-201ENST00000217315 WDR19Q8NEZ3 1342 aa13.94□□□□□ -0.18
TM9SF4-201ENST00000217315 CTAGE9A4FU28 777 aa13.94□□□□□ -0.18
TM9SF4-201ENST00000217315 KRT9P35527 623 aa13.94□□□□□ -0.18
TM9SF4-201ENST00000217315 SHC4Q6S5L8 630 aa13.94□□□□□ -0.18
TM9SF4-201ENST00000217315 BLIDQ8IZY5 108 aa13.94□□□□□ -0.18
TM9SF4-201ENST00000217315 JADE2Q9NQC1 790 aa13.94□□□□□ -0.18
TM9SF4-201ENST00000217315 MAN1B1Q9UKM7 699 aa13.94□□□□□ -0.18
TM9SF4-201ENST00000217315 PRDX5P30044 214 aa13.94□□□□□ -0.18
TM9SF4-201ENST00000217315 TXKP42681 527 aa13.94□□□□□ -0.18
TM9SF4-201ENST00000217315 ALX1Q15699 326 aa13.94□□□□□ -0.18
TM9SF4-201ENST00000217315 INF2Q27J81 1249 aa13.94□□□□□ -0.18
TM9SF4-201ENST00000217315 SGMS1Q86VZ5 419 aa13.94□□□□□ -0.18
TM9SF4-201ENST00000217315 DHX40Q8IX18 779 aaKnown RBP13.94□□□□□ -0.18
TM9SF4-201ENST00000217315 IGDCC4Q8TDY8 1250 aa13.94□□□□□ -0.18
TM9SF4-201ENST00000217315 DRC1Q96MC2 740 aa13.94□□□□□ -0.18
TM9SF4-201ENST00000217315 GGA1Q9UJY5 639 aa13.94□□□□□ -0.18
TM9SF4-201ENST00000217315 USO1O60763 962 aaKnown RBP13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 ERCC3P19447 782 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 MECOMQ03112 1051 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 PDE4DQ08499 809 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 PPP1R13BQ96KQ4 1090 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 UIMC1Q96RL1 719 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 SAMSN1Q9NSI8 373 aaKnown RBP13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 ATP8A2Q9NTI2 1148 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 OGFRQ9NZT2 677 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 ABCC12Q96J65 1359 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 USP17L8P0C7I0 530 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 MINPP1Q9UNW1 487 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 USP27XA6NNY8 438 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 CASP1P29466 404 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 KRT79Q5XKE5 535 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 ZNF34Q8IZ26 560 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 NELFBQ8WX92 580 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 GBP3Q9H0R5 595 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 UBE2Q2LH0YL09 131 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 FOXN1O15353 648 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 PTPREP23469 700 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 TBC1D8BQ0IIM8 1120 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 NAA30Q147X3 362 aaPredicted RBP13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 DIXDC1Q155Q3 683 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 MFSD14BQ5SR56 506 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 RESP18Q5W5W9 173 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 TRIML1Q8N9V2 468 aa13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 EPB41L4AQ9HCS5 686 aaPredicted RBP13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 BSDC1Q9NW68 430 aaPredicted RBP13.93□□□□□ -0.18
TM9SF4-201ENST00000217315 CTAGE15A4D2H0 777 aa13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 DDAH1O94760 285 aa13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 CTAGE8P0CG41 777 aa13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 CYLC1P35663 651 aaPredicted RBP13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 PLCD1P51178 756 aa13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 PPP2R3AQ06190 1150 aa13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 CTAGE6Q86UF2 777 aa13.92□□□□□ -0.18
TM9SF4-201ENST00000217315 CTAGE4Q8IX94 777 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms