RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 CFAP61Q8NHU2 1237 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 Q9H521 79 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 TXNDC16Q9P2K2 825 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 MYCNP04198 464 aaPredicted RBP11.56□□□□□ -0.56
VCL-201ENST00000211998 PNOCQ13519 176 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 CASP8Q14790 479 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 MTHFSDQ2M296 383 aaKnown RBP11.56□□□□□ -0.56
VCL-201ENST00000211998 VWA3BQ502W6 1294 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 CSGALNACT2Q8N6G5 542 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 RRP36Q96EU6 259 aaKnown RBP11.56□□□□□ -0.56
VCL-201ENST00000211998 EYA3Q99504 573 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 ASIC3Q9UHC3 531 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 HYOU1Q9Y4L1 999 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 PCDH11XQ9BZA7 1347 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 PCDH11YQ9BZA8 1340 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 TTC36A6NLP5 189 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 SPOPO43791 374 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 ZMYND10O75800 440 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 POSTNQ15063 836 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 INF2Q27J81 1249 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 KMT5BQ4FZB7 885 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 SIRT1Q96EB6 747 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 EPSTI1Q96J88 318 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 NAP1L4Q99733 375 aaKnown RBP11.56□□□□□ -0.56
VCL-201ENST00000211998 C19orf44Q9H6X5 657 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 POLKQ9UBT6 870 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 PIK3C2GO75747 1445 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 VAMP4O75379 141 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 OTUD7BQ6GQQ9 843 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 SBNO2Q9Y2G9 1366 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 SUN1O94901 812 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 ZSCAN20P17040 1043 aaPredicted RBP11.56□□□□□ -0.56
VCL-201ENST00000211998 ASIC2Q16515 512 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 SLC4A8Q2Y0W8 1093 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 FAM133BQ5BKY9 247 aaKnown RBP11.56□□□□□ -0.56
VCL-201ENST00000211998 KLHL29Q96CT2 875 aa11.56□□□□□ -0.56
VCL-201ENST00000211998 XAB2Q9HCS7 855 aaKnown RBP11.56□□□□□ -0.56
VCL-201ENST00000211998 I3L4J1 428 aa11.55□□□□□ -0.56
VCL-201ENST00000211998 TRPC3Q13507 836 aa11.55□□□□□ -0.56
VCL-201ENST00000211998 SPDL1Q96EA4 605 aa11.55□□□□□ -0.56
VCL-201ENST00000211998 ACSBG1Q96GR2 724 aa11.55□□□□□ -0.56
VCL-201ENST00000211998 RAB17Q9H0T7 212 aa11.55□□□□□ -0.56
VCL-201ENST00000211998 YY1AP1Q9H869 796 aa11.55□□□□□ -0.56
VCL-201ENST00000211998 RTCBQ9Y3I0 505 aaKnown RBP11.55□□□□□ -0.56
VCL-201ENST00000211998 STX10O60499 249 aa11.55□□□□□ -0.56
VCL-201ENST00000211998 ACTN3Q08043 901 aaPredicted RBP11.55□□□□□ -0.56
VCL-201ENST00000211998 TRMT1LQ7Z2T5 733 aaKnown RBP11.55□□□□□ -0.56
VCL-201ENST00000211998 TSPYL6Q8N831 410 aa11.55□□□□□ -0.56
VCL-201ENST00000211998 NCOA5Q9HCD5 579 aaKnown RBP11.55□□□□□ -0.56
VCL-201ENST00000211998 NOP53Q9NZM5 478 aaKnown RBP11.55□□□□□ -0.56
VCL-201ENST00000211998 THEGQ9P2T0 379 aa11.55□□□□□ -0.56
VCL-201ENST00000211998 ARL1P40616 181 aaPredicted RBP11.55□□□□□ -0.56
VCL-201ENST00000211998 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.55□□□□□ -0.56
VCL-201ENST00000211998 PRR16Q569H4 304 aa11.55□□□□□ -0.56
VCL-201ENST00000211998 NBPF14Q5TI25 921 aa11.55□□□□□ -0.56
VCL-201ENST00000211998 SLC35F6Q8N357 371 aa11.55□□□□□ -0.56
VCL-201ENST00000211998 UBL4BQ8N7F7 174 aa11.55□□□□□ -0.56
VCL-201ENST00000211998 HAUS1Q96CS2 278 aa11.55□□□□□ -0.56
VCL-201ENST00000211998 ABCB6Q9NP58 842 aa11.55□□□□□ -0.56
VCL-201ENST00000211998 PA2G4Q9UQ80 394 aaKnown RBP11.55□□□□□ -0.56
VCL-201ENST00000211998 PABPN1LA6NDY0 278 aaKnown RBP11.55□□□□□ -0.56
VCL-201ENST00000211998 ZNF174Q15697 407 aa11.55□□□□□ -0.56
VCL-201ENST00000211998 KRT79Q5XKE5 535 aa11.55□□□□□ -0.56
VCL-201ENST00000211998 TYW1BQ6NUM6 668 aa11.55□□□□□ -0.56
VCL-201ENST00000211998 DTHD1Q6ZMT9 781 aa11.55□□□□□ -0.56
VCL-201ENST00000211998 RILPQ96NA2 401 aa11.55□□□□□ -0.56
VCL-201ENST00000211998 ZC3H12CQ9C0D7 883 aaKnown RBP11.55□□□□□ -0.56
VCL-201ENST00000211998 SPDYE3A6NKU9 549 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 UBAP1LF5GYI3 381 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 SPECC1L-ADORA2AF8WAN1 911 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 IRS4O14654 1257 aaPredicted RBP11.54□□□□□ -0.56
VCL-201ENST00000211998 RILPL1Q5EBL4 403 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 CXorf38Q8TB03 319 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 FBXO41Q8TF61 875 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 IMPG2Q9BZV3 1241 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 BABAM1Q9NWV8 329 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 SBNO1A3KN83 1393 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 TRAF5O00463 557 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 JAK2O60674 1132 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 GNA11P29992 359 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 PICALMQ13492 652 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 NAA30Q147X3 362 aaPredicted RBP11.54□□□□□ -0.56
VCL-201ENST00000211998 SLFNL1Q499Z3 407 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 IRX1P78414 480 aaPredicted RBP11.54□□□□□ -0.56
VCL-201ENST00000211998 DCAF17Q5H9S7 520 aaPredicted RBP11.54□□□□□ -0.56
VCL-201ENST00000211998 MAP3K21Q5TCX8 1036 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 OR8K1Q8NGG5 319 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 HAUS4Q9H6D7 363 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 ZCCHC17Q9NP64 241 aaKnown RBP11.54□□□□□ -0.56
VCL-201ENST00000211998 PARP3Q9Y6F1 533 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 NDC80O14777 642 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 TRIM66O15016 1216 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 GMNNO75496 209 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 GUCY2DQ02846 1103 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 PEX26Q7Z412 305 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 CCDC105Q8IYK2 499 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 CDCA7Q9BWT1 371 aaPredicted RBP11.54□□□□□ -0.56
VCL-201ENST00000211998 MTMR6Q9Y217 621 aa11.54□□□□□ -0.56
VCL-201ENST00000211998 SGSM2O43147 1006 aa11.53□□□□□ -0.56
VCL-201ENST00000211998 STMN1P16949 149 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms