RNA–Protein interactions for RNA: ENSMUST00000001818.4

Crnkl1-201, Transcript of Crooked neck-like protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Crnkl1, Length 3,428 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1-201ENSMUST00000001818 Myh15E9Q264 1925 aa8.63□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Tcof1O08784 1320 aaKnown RBP8.63□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Aox1O54754 1333 aa8.63□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Zscan20B2KFW1 1030 aa8.63□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 CebpzP53569 1052 aaKnown RBP8.63□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Ano6Q6P9J9 911 aa8.63□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Acot9Q9R0X4 439 aaKnown RBP8.63□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 IkQ9Z1M8 557 aaKnown RBP8.63□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Dnai2A2AC93 623 aa8.63□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Cfap58B2RW38 873 aa8.63□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Gm20425E9Q035 978 aaKnown RBP8.63□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Nfil3O08750 462 aa8.63□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 SrprbP47758 269 aa8.63□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Clic6Q8BHB9 596 aa8.63□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Rtn1Q8K0T0 780 aa8.63□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Serpina10Q8R121 448 aa8.63□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Ccdc112A0AUP1 442 aa8.62□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Brpf3B2KF05 1204 aaKnown RBP8.62□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Rsph10bE9PYQ0 876 aa8.62□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Qrich1Q3UA37 777 aa8.62□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Klrg2Q3UM83 387 aa8.62□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Klhdc9Q3USL1 350 aa8.62□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Tigd5Q499M4 642 aa8.62□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Tbc1d9bQ5SVR0 1263 aa8.62□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Frmd3Q8BHD4 595 aa8.62□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Ranbp6Q8BIV3 1105 aa8.62□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Phf14Q9D4H9 881 aa8.62□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Trmt112Q9DCG9 125 aa8.62□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 PdcQ9QW08 244 aa8.62□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Nup98Q6PFD9 1816 aaKnown RBP8.62□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Mex3cQ05A36 652 aaKnown RBP8.62□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 CbarpQ66L44 698 aa8.62□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Ift122Q6NWV3 1182 aa8.62□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Rrp12Q6P5B0 1295 aaKnown RBP8.62□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Senp6Q6P7W0 1132 aa8.62□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Spon1Q8VCC9 807 aa8.62□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Ascc2Q91WR3 749 aa8.62□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Nrbp1Q99J45 535 aa8.62□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Sel1lQ9Z2G6 790 aa8.62□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Zscan18E9PUD6 809 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Lmod3E9QA62 571 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Alppl2P24823 529 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Sptlc2P97363 560 aaKnown RBP8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Sap30bpQ02614 308 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Prr7Q3V0I2 269 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Sp4Q62445 782 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Tmc4Q7TQ65 694 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Cep120Q7TSG1 988 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Hps6Q8BLY7 805 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Gimap7Q8R379 293 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Ndufb9Q9CQJ8 179 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Cdca7Q9D0M2 382 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Galntl5Q9D4M9 431 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Wdr33Q8K4P0 1330 aaKnown RBP8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 A430078G23RikE9Q7Y4 484 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Atp2b1G5E829 1220 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Sept2P42208 361 aaKnown RBP8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Cdkl5Q3UTQ8 938 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Glra4Q61603 456 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Ube2oQ6ZPJ3 1288 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Ctdspl2Q8BG15 465 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Rbm10Q99KG3 930 aaKnown RBP8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Ftl1P29391 183 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Grin1P35438 938 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Fdx1P46656 188 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Exoc8Q6PGF7 716 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Iqca1Q9CUL5 857 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Ppil2Q9D787 521 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Cnpy3Q9DAU1 276 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Cfap44E9Q5M6 1843 aa8.61□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Npr3P70180 536 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 PcQ05920 1178 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Lgr6Q3UVD5 967 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Krt82Q99M74 516 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Gm10134F6ZQC6 126 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Rps12P63323 132 aaKnown RBP8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Gtpbp6Q3U6U5 514 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Pex1Q5BL07 1284 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 ErmnQ5EBJ4 281 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Smarcc2Q6PDG5 1213 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Tbc1d5Q80XQ2 815 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Stac3Q8BZ71 360 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Ppp1r11Q8K1L5 131 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Trex1Q91XB0 314 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Akap8Q9DBR0 687 aaKnown RBP8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Col4a3bpQ9EQG9 624 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Tmem47Q9JJG6 181 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 A0A1W2P6Q8 802 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Gm9048A0A1W2P7H4 802 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 A0A1W2P7Z8 802 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Gm9046A0A1W2P855 802 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Zkscan7E9PVW1 718 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Arid5bQ8BM75 1188 aaKnown RBP8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Mtmr3Q8K296 1196 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Paf1Q8K2T8 535 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Nod2Q8K3Z0 1020 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Tmem79Q9D709 391 aa8.6□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Akr1c19G3X9Y6 323 aa8.59□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Nbr1P97432 988 aa8.59□□□□□ -1.03
Crnkl1-201ENSMUST00000001818 Thrap3Q569Z6 951 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 21.8 ms