RNA–Protein interactions for RNA: ENSMUST00000169486.8

Ebf3-204, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 4,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-204ENSMUST00000169486 Mt4P47945 62 aa5.34□□□□□ -1.55
Ebf3-204ENSMUST00000169486 Krtap31-1Q9D644 177 aa5.34□□□□□ -1.55
Ebf3-204ENSMUST00000169486 Hmcn2A2AJ76 5100 aa5.32□□□□□ -1.56
Ebf3-204ENSMUST00000169486 Sprr2dO70555 85 aa5.24□□□□□ -1.57
Ebf3-204ENSMUST00000169486 Gm11938Q9D3H4 131 aa5.24□□□□□ -1.57
Ebf3-204ENSMUST00000169486 Muc5bE9Q5I3 4800 aa5.18□□□□□ -1.58
Ebf3-204ENSMUST00000169486 Krtap4-1Q3UUY3 169 aa5.17□□□□□ -1.58
Ebf3-204ENSMUST00000169486 Sprr2hO70559 108 aa5.15□□□□□ -1.58
Ebf3-204ENSMUST00000169486 Sprr2fO70557 76 aa5.12□□□□□ -1.59
Ebf3-204ENSMUST00000169486 Gm11596B1AQB0 205 aa5.12□□□□□ -1.59
Ebf3-204ENSMUST00000169486 Gm11564A2A4L9 201 aa5.06□□□□□ -1.6
Ebf3-204ENSMUST00000169486 Gm11563B1AQ90 168 aa5.06□□□□□ -1.6
Ebf3-204ENSMUST00000169486 Gm11595B1AQA7 289 aa5.06□□□□□ -1.6
Ebf3-204ENSMUST00000169486 Krtap4-8B1AQA8 209 aa5.06□□□□□ -1.6
Ebf3-204ENSMUST00000169486 Krtap4-9B1AQA9 244 aa5.03□□□□□ -1.6
Ebf3-204ENSMUST00000169486 Gm11562A0PK51 136 aa4.99□□□□□ -1.61
Ebf3-204ENSMUST00000169486 2300003K06RikA2A4M0 262 aa4.97□□□□□ -1.61
Ebf3-204ENSMUST00000169486 Fsip2A2ARZ3 6995 aa4.95□□□□□ -1.62
Ebf3-204ENSMUST00000169486 Krtap4-16Q91W93 202 aa4.92□□□□□ -1.62
Ebf3-204ENSMUST00000169486 SspoQ8CG65 4998 aa4.91□□□□□ -1.62
Ebf3-204ENSMUST00000169486 Krtap4-7Q9D732 168 aa4.91□□□□□ -1.62
Ebf3-204ENSMUST00000169486 Krtap31-2Q8CAY5 177 aa4.88□□□□□ -1.63
Ebf3-204ENSMUST00000169486 Krtap4-13Q9D7P3 165 aa4.87□□□□□ -1.63
Ebf3-204ENSMUST00000169486 Lce1kJ3QP15 125 aa4.81□□□□□ -1.64
Ebf3-204ENSMUST00000169486 Syne2Q6ZWQ0 6874 aaKnown RBP4.78□□□□□ -1.64
Ebf3-204ENSMUST00000169486 ObscnA2AAJ9 8891 aaKnown RBP4.74□□□□□ -1.65
Ebf3-204ENSMUST00000169486 Lce1a1Q9CQH5 143 aa4.67□□□□□ -1.66
Ebf3-204ENSMUST00000169486 A0A1Y7VLE6 161 aa4.6□□□□□ -1.67
Ebf3-204ENSMUST00000169486 Mt3P28184 68 aa4.59□□□□□ -1.67
Ebf3-204ENSMUST00000169486 Krtap6-3A0A087WQL6 57 aa4.55□□□□□ -1.68
Ebf3-204ENSMUST00000169486 Macf1Q9QXZ0 7354 aaKnown RBP4.45□□□□□ -1.7
Ebf3-204ENSMUST00000169486 Mt1P02802 61 aaKnown RBP4.39□□□□□ -1.71
Ebf3-204ENSMUST00000169486 Krtap20-2E9Q0A8 60 aa4.3□□□□□ -1.72
Ebf3-204ENSMUST00000169486 Gm11554B1AQB2 190 aa4.29□□□□□ -1.72
Ebf3-204ENSMUST00000169486 A0A1Y7VJH8 109 aa4.28□□□□□ -1.72
Ebf3-204ENSMUST00000169486 Gm11555B1AQ89 175 aa4.26□□□□□ -1.73
Ebf3-204ENSMUST00000169486 A030003K21RikA0A1Y7VIM3 128 aa4.17□□□□□ -1.74
Ebf3-204ENSMUST00000169486 Krtap28-10A0A1Y7VP58 119 aa4.17□□□□□ -1.74
Ebf3-204ENSMUST00000169486 DstQ91ZU6 7393 aaKnown RBP4.1□□□□□ -1.75
Ebf3-204ENSMUST00000169486 Muc19Q6PZE0 7524 aa4.05□□□□□ -1.76
Ebf3-204ENSMUST00000169486 Krtap28-13A0A087WQP5 138 aa4.01□□□□□ -1.77
Ebf3-204ENSMUST00000169486 Kmt2dQ6PDK2 5588 aa4□□□□□ -1.77
Ebf3-204ENSMUST00000169486 Eppk1Q8R0W0 6548 aa3.99□□□□□ -1.77
Ebf3-204ENSMUST00000169486 Sprr2bO70554 98 aa3.99□□□□□ -1.77
Ebf3-204ENSMUST00000169486 NebE9Q1W3 7152 aa3.98□□□□□ -1.77
Ebf3-204ENSMUST00000169486 A030005K14RikA0A1Y7VNY1 122 aa3.93□□□□□ -1.78
Ebf3-204ENSMUST00000169486 Gm6217A0A1Y7VJK9 128 aa3.92□□□□□ -1.78
Ebf3-204ENSMUST00000169486 A030005L19RikA0A1Y7VIU2 113 aa3.86□□□□□ -1.79
Ebf3-204ENSMUST00000169486 Gm7544A0A1Y7VJ58 118 aa3.85□□□□□ -1.79
Ebf3-204ENSMUST00000169486 A0A1Y7VJ07 166 aa3.81□□□□□ -1.8
Ebf3-204ENSMUST00000169486 1110025L11RikO09048 78 aa3.62□□□□□ -1.83
Ebf3-204ENSMUST00000169486 Krtap6-5Q925H3 78 aa3.62□□□□□ -1.83
Ebf3-204ENSMUST00000169486 Gm11568A2A4M2 211 aa3.58□□□□□ -1.84
Ebf3-204ENSMUST00000169486 Krtap9-1Q64526 186 aa3.58□□□□□ -1.84
Ebf3-204ENSMUST00000169486 Gm11559Q9D3H7 191 aa3.57□□□□□ -1.84
Ebf3-204ENSMUST00000169486 A030014E15RikA0A1Y7VJV2 120 aa3.47□□□□□ -1.85
Ebf3-204ENSMUST00000169486 Gpr98Q8VHN7 6298 aaKnown RBP3.38□□□□□ -1.87
Ebf3-204ENSMUST00000169486 Gm10229O08631 77 aa3.38□□□□□ -1.87
Ebf3-204ENSMUST00000169486 Gm11639A0A1D5RLM8 5808 aa3.38□□□□□ -1.87
Ebf3-204ENSMUST00000169486 Krtap5-2Q9D5Z7 189 aa3.35□□□□□ -1.87
Ebf3-204ENSMUST00000169486 Phgr1Q8K0G7 91 aa3.31□□□□□ -1.88
Ebf3-204ENSMUST00000169486 Hmcn1D3YXG0 5634 aa3.23□□□□□ -1.89
Ebf3-204ENSMUST00000169486 Gm4553A0A1B0GSA9 284 aa3.16□□□□□ -1.9
Ebf3-204ENSMUST00000169486 Gm11567Q9D141 195 aa3.08□□□□□ -1.92
Ebf3-204ENSMUST00000169486 Gm10153A0A1B0GRL1 320 aa2.97□□□□□ -1.93
Ebf3-204ENSMUST00000169486 Gm2431E9Q8S1 172 aa2.96□□□□□ -1.94
Ebf3-204ENSMUST00000169486 AhnakE9Q616 5656 aaKnown RBP2.88□□□□□ -1.95
Ebf3-204ENSMUST00000169486 A0A286YCP9 139 aa2.86□□□□□ -1.95
Ebf3-204ENSMUST00000169486 Gm45337A0A1B0GS71 263 aa2.82□□□□□ -1.96
Ebf3-204ENSMUST00000169486 Gm40460A0A1B0GR10 244 aa2.77□□□□□ -1.97
Ebf3-204ENSMUST00000169486 Gm7579A0A1B0GRJ4 243 aa2.77□□□□□ -1.97
Ebf3-204ENSMUST00000169486 Krtap5-5Q2TA51 241 aa2.77□□□□□ -1.97
Ebf3-204ENSMUST00000169486 Krtap5-4Q62220 223 aa2.77□□□□□ -1.97
Ebf3-204ENSMUST00000169486 Krtap6-2O08884 159 aa2.73□□□□□ -1.97
Ebf3-204ENSMUST00000169486 Krtap21-1Q925H4 128 aa2.6□□□□□ -1.99
Ebf3-204ENSMUST00000169486 Gm39115A0A1B0GSH7 232 aa2.58□□□□□ -2
Ebf3-204ENSMUST00000169486 Gm45618A0A1B0GSA0 219 aa2.22□□□□□ -2.05
Ebf3-204ENSMUST00000169486 Gm29735A0A1B0GT06 219 aa2.09□□□□□ -2.08
Ebf3-204ENSMUST00000169486 Krtap5-1Q64507 230 aa1.57□□□□□ -2.16
Ebf3-204ENSMUST00000169486 Gm4559A4IF42 199 aa1.19□□□□□ -2.22
Retrieved 80 of 22,080 RNA–protein pairs in 84 ms