RNA–Protein interactions for RNA: ENSMUST00000164052.4

Vps50-202, Transcript of Syndetin, mousemouse

TSL 1 (best) BASIC

Gene Vps50, Length 4,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50-202ENSMUST00000164052 Eppk1Q8R0W0 6548 aa1.93□□□□□ -2.1
Vps50-202ENSMUST00000164052 Syne2Q6ZWQ0 6874 aaKnown RBP1.93□□□□□ -2.1
Vps50-202ENSMUST00000164052 Krtap6-3A0A087WQL6 57 aa1.92□□□□□ -2.1
Vps50-202ENSMUST00000164052 Krtap19-2Q925I0 141 aa1.92□□□□□ -2.1
Vps50-202ENSMUST00000164052 Sprr2fO70557 76 aa1.91□□□□□ -2.1
Vps50-202ENSMUST00000164052 Lce1lQ9D1G7 135 aa1.91□□□□□ -2.1
Vps50-202ENSMUST00000164052 Mt3P28184 68 aa1.91□□□□□ -2.1
Vps50-202ENSMUST00000164052 Gm10100J3QK64 120 aa1.9□□□□□ -2.11
Vps50-202ENSMUST00000164052 Lce1iQ9D6P5 149 aa1.9□□□□□ -2.11
Vps50-202ENSMUST00000164052 Lce1a2Q9D1K4 149 aa1.89□□□□□ -2.11
Vps50-202ENSMUST00000164052 Gm11564A2A4L9 201 aa1.89□□□□□ -2.11
Vps50-202ENSMUST00000164052 Gm11595B1AQA7 289 aa1.89□□□□□ -2.11
Vps50-202ENSMUST00000164052 Krtap4-8B1AQA8 209 aa1.89□□□□□ -2.11
Vps50-202ENSMUST00000164052 Lce3bQ9CQM7 98 aa1.88□□□□□ -2.11
Vps50-202ENSMUST00000164052 Gm10142J3KMP7 120 aa1.88□□□□□ -2.11
Vps50-202ENSMUST00000164052 Mt2P02798 61 aa1.87□□□□□ -2.11
Vps50-202ENSMUST00000164052 Mt4P47945 62 aa1.87□□□□□ -2.11
Vps50-202ENSMUST00000164052 Muc5bE9Q5I3 4800 aa1.84□□□□□ -2.11
Vps50-202ENSMUST00000164052 Krtap4-9B1AQA9 244 aa1.84□□□□□ -2.12
Vps50-202ENSMUST00000164052 Krtap19-4Q925H7 84 aa1.82□□□□□ -2.12
Vps50-202ENSMUST00000164052 Lce3cQ91V05 98 aa1.8□□□□□ -2.12
Vps50-202ENSMUST00000164052 Gpr98Q8VHN7 6298 aaKnown RBP1.79□□□□□ -2.12
Vps50-202ENSMUST00000164052 Lce3dE9Q8V1 98 aa1.79□□□□□ -2.12
Vps50-202ENSMUST00000164052 Sprr2eO70556 76 aa1.79□□□□□ -2.12
Vps50-202ENSMUST00000164052 ZanO88799 5376 aa1.78□□□□□ -2.12
Vps50-202ENSMUST00000164052 Fat4Q2PZL6 4981 aa1.78□□□□□ -2.12
Vps50-202ENSMUST00000164052 Lce1cQ9D1C5 147 aa1.78□□□□□ -2.13
Vps50-202ENSMUST00000164052 Mdn1A2ANY6 5589 aaKnown RBP1.77□□□□□ -2.13
Vps50-202ENSMUST00000164052 Lce3eF8VQJ0 98 aa1.76□□□□□ -2.13
Vps50-202ENSMUST00000164052 Lce3fQ6PAI4 98 aa1.76□□□□□ -2.13
Vps50-202ENSMUST00000164052 2300003K06RikA2A4M0 262 aa1.75□□□□□ -2.13
Vps50-202ENSMUST00000164052 Krtap4-13Q9D7P3 165 aa1.75□□□□□ -2.13
Vps50-202ENSMUST00000164052 Lce1fB9EJP6 147 aa1.75□□□□□ -2.13
Vps50-202ENSMUST00000164052 Lce3aQ497I5 98 aa1.74□□□□□ -2.13
Vps50-202ENSMUST00000164052 Sprr2hO70559 108 aa1.73□□□□□ -2.13
Vps50-202ENSMUST00000164052 Ush2AQ2QI47 5193 aa1.72□□□□□ -2.13
Vps50-202ENSMUST00000164052 Krtap20-2E9Q0A8 60 aa1.71□□□□□ -2.13
Vps50-202ENSMUST00000164052 Gm2431E9Q8S1 172 aa1.7□□□□□ -2.14
Vps50-202ENSMUST00000164052 Fsip2A2ARZ3 6995 aa1.7□□□□□ -2.14
Vps50-202ENSMUST00000164052 Rnf213E9Q555 5152 aaKnown RBP1.7□□□□□ -2.14
Vps50-202ENSMUST00000164052 Krtap4-16Q91W93 202 aa1.66□□□□□ -2.14
Vps50-202ENSMUST00000164052 DstQ91ZU6 7393 aaKnown RBP1.64□□□□□ -2.15
Vps50-202ENSMUST00000164052 SspoQ8CG65 4998 aa1.63□□□□□ -2.15
Vps50-202ENSMUST00000164052 Gm45618A0A1B0GSA0 219 aa1.62□□□□□ -2.15
Vps50-202ENSMUST00000164052 Macf1Q9QXZ0 7354 aaKnown RBP1.61□□□□□ -2.15
Vps50-202ENSMUST00000164052 Gm10024A0A0A0MQA4 119 aa1.59□□□□□ -2.15
Vps50-202ENSMUST00000164052 Syne1Q6ZWR6 8799 aa1.58□□□□□ -2.16
Vps50-202ENSMUST00000164052 Gm39115A0A1B0GSH7 232 aa1.56□□□□□ -2.16
Vps50-202ENSMUST00000164052 Gm11554B1AQB2 190 aa1.56□□□□□ -2.16
Vps50-202ENSMUST00000164052 Lce1kJ3QP15 125 aa1.55□□□□□ -2.16
Vps50-202ENSMUST00000164052 NebE9Q1W3 7152 aa1.52□□□□□ -2.17
Vps50-202ENSMUST00000164052 Gm29735A0A1B0GT06 219 aa1.51□□□□□ -2.17
Vps50-202ENSMUST00000164052 Krtap9-1Q64526 186 aa1.51□□□□□ -2.17
Vps50-202ENSMUST00000164052 Gm11567Q9D141 195 aa1.5□□□□□ -2.17
Vps50-202ENSMUST00000164052 Gm10153A0A1B0GRL1 320 aa1.5□□□□□ -2.17
Vps50-202ENSMUST00000164052 ObscnA2AAJ9 8891 aaKnown RBP1.48□□□□□ -2.17
Vps50-202ENSMUST00000164052 Gm45337A0A1B0GS71 263 aa1.47□□□□□ -2.17
Vps50-202ENSMUST00000164052 Gm11639A0A1D5RLM8 5808 aa1.46□□□□□ -2.18
Vps50-202ENSMUST00000164052 Mt1P02802 61 aaKnown RBP1.39□□□□□ -2.19
Vps50-202ENSMUST00000164052 Kmt2dQ6PDK2 5588 aa1.37□□□□□ -2.19
Vps50-202ENSMUST00000164052 Gm11568A2A4M2 211 aa1.37□□□□□ -2.19
Vps50-202ENSMUST00000164052 Krtap5-2Q9D5Z7 189 aa1.36□□□□□ -2.19
Vps50-202ENSMUST00000164052 Krtap5-4Q62220 223 aa1.34□□□□□ -2.19
Vps50-202ENSMUST00000164052 Hmcn1D3YXG0 5634 aa1.32□□□□□ -2.2
Vps50-202ENSMUST00000164052 Sprr2bO70554 98 aa1.31□□□□□ -2.2
Vps50-202ENSMUST00000164052 Muc16A0A140LJ72 8478 aa1.31□□□□□ -2.2
Vps50-202ENSMUST00000164052 Gm4553A0A1B0GSA9 284 aa1.28□□□□□ -2.21
Vps50-202ENSMUST00000164052 Krtap5-1Q64507 230 aa1.27□□□□□ -2.21
Vps50-202ENSMUST00000164052 Gm4559A4IF42 199 aa1.27□□□□□ -2.21
Vps50-202ENSMUST00000164052 Muc19Q6PZE0 7524 aa1.13□□□□□ -2.23
Vps50-202ENSMUST00000164052 AhnakE9Q616 5656 aaKnown RBP1.12□□□□□ -2.23
Vps50-202ENSMUST00000164052 1110025L11RikO09048 78 aa1.12□□□□□ -2.23
Vps50-202ENSMUST00000164052 Krtap6-5Q925H3 78 aa1.12□□□□□ -2.23
Vps50-202ENSMUST00000164052 Gm40460A0A1B0GR10 244 aa1.11□□□□□ -2.23
Vps50-202ENSMUST00000164052 Gm7579A0A1B0GRJ4 243 aa1.11□□□□□ -2.23
Vps50-202ENSMUST00000164052 Krtap5-5Q2TA51 241 aa1.11□□□□□ -2.23
Vps50-202ENSMUST00000164052 Phgr1Q8K0G7 91 aa1.05□□□□□ -2.24
Vps50-202ENSMUST00000164052 Gm10229O08631 77 aa1.03□□□□□ -2.25
Vps50-202ENSMUST00000164052 Krtap21-1Q925H4 128 aa0.9□□□□□ -2.26
Vps50-202ENSMUST00000164052 Krtap6-2O08884 159 aa0.87□□□□□ -2.27
Retrieved 80 of 22,080 RNA–protein pairs in 86.5 ms