RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Fsip2A2ARZ3 6995 aa5.3□□□□□ -1.56
Pcdh1-203ENSMUST00000160721 Lce1a2Q9D1K4 149 aa5.3□□□□□ -1.56
Pcdh1-203ENSMUST00000160721 Krtap4-9B1AQA9 244 aa5.28□□□□□ -1.56
Pcdh1-203ENSMUST00000160721 Sprr2fO70557 76 aa5.28□□□□□ -1.56
Pcdh1-203ENSMUST00000160721 Krtap17-1A2A5X6 109 aa5.28□□□□□ -1.56
Pcdh1-203ENSMUST00000160721 Muc5bE9Q5I3 4800 aa5.27□□□□□ -1.57
Pcdh1-203ENSMUST00000160721 Lce1eQ9D139 143 aa5.26□□□□□ -1.57
Pcdh1-203ENSMUST00000160721 Syne2Q6ZWQ0 6874 aaKnown RBP5.23□□□□□ -1.57
Pcdh1-203ENSMUST00000160721 Sprr2eO70556 76 aa5.2□□□□□ -1.58
Pcdh1-203ENSMUST00000160721 2300003K06RikA2A4M0 262 aa5.19□□□□□ -1.58
Pcdh1-203ENSMUST00000160721 Krtap4-13Q9D7P3 165 aa5.16□□□□□ -1.58
Pcdh1-203ENSMUST00000160721 Krtap19-4Q925H7 84 aa5.15□□□□□ -1.58
Pcdh1-203ENSMUST00000160721 Krtap4-7Q9D732 168 aa5.13□□□□□ -1.59
Pcdh1-203ENSMUST00000160721 Hmcn2A2AJ76 5100 aa5.08□□□□□ -1.6
Pcdh1-203ENSMUST00000160721 Syne1Q6ZWR6 8799 aa4.95□□□□□ -1.62
Pcdh1-203ENSMUST00000160721 Gm11562A0PK51 136 aa4.9□□□□□ -1.62
Pcdh1-203ENSMUST00000160721 Lce1kJ3QP15 125 aa4.87□□□□□ -1.63
Pcdh1-203ENSMUST00000160721 SspoQ8CG65 4998 aa4.86□□□□□ -1.63
Pcdh1-203ENSMUST00000160721 Krtap31-1Q9D644 177 aa4.83□□□□□ -1.64
Pcdh1-203ENSMUST00000160721 Lce1a1Q9CQH5 143 aa4.78□□□□□ -1.64
Pcdh1-203ENSMUST00000160721 Krtap6-3A0A087WQL6 57 aa4.74□□□□□ -1.65
Pcdh1-203ENSMUST00000160721 Sprr2hO70559 108 aa4.73□□□□□ -1.65
Pcdh1-203ENSMUST00000160721 Sprr2dO70555 85 aa4.67□□□□□ -1.66
Pcdh1-203ENSMUST00000160721 Gm11938Q9D3H4 131 aa4.64□□□□□ -1.67
Pcdh1-203ENSMUST00000160721 Gm11554B1AQB2 190 aa4.58□□□□□ -1.68
Pcdh1-203ENSMUST00000160721 Macf1Q9QXZ0 7354 aaKnown RBP4.53□□□□□ -1.68
Pcdh1-203ENSMUST00000160721 Krtap4-16Q91W93 202 aa4.51□□□□□ -1.69
Pcdh1-203ENSMUST00000160721 Mt3P28184 68 aa4.49□□□□□ -1.69
Pcdh1-203ENSMUST00000160721 Krtap20-2E9Q0A8 60 aa4.44□□□□□ -1.7
Pcdh1-203ENSMUST00000160721 Muc16A0A140LJ72 8478 aa4.4□□□□□ -1.71
Pcdh1-203ENSMUST00000160721 Gm11555B1AQ89 175 aa4.36□□□□□ -1.71
Pcdh1-203ENSMUST00000160721 Krtap31-2Q8CAY5 177 aa4.33□□□□□ -1.72
Pcdh1-203ENSMUST00000160721 Mt1P02802 61 aaKnown RBP4.19□□□□□ -1.74
Pcdh1-203ENSMUST00000160721 NebE9Q1W3 7152 aa4.17□□□□□ -1.74
Pcdh1-203ENSMUST00000160721 Eppk1Q8R0W0 6548 aa4.16□□□□□ -1.74
Pcdh1-203ENSMUST00000160721 DstQ91ZU6 7393 aaKnown RBP4.12□□□□□ -1.75
Pcdh1-203ENSMUST00000160721 ObscnA2AAJ9 8891 aaKnown RBP4.05□□□□□ -1.76
Pcdh1-203ENSMUST00000160721 Sprr2bO70554 98 aa3.96□□□□□ -1.77
Pcdh1-203ENSMUST00000160721 Kmt2dQ6PDK2 5588 aa3.92□□□□□ -1.78
Pcdh1-203ENSMUST00000160721 Muc19Q6PZE0 7524 aa3.84□□□□□ -1.8
Pcdh1-203ENSMUST00000160721 Gm11559Q9D3H7 191 aa3.65□□□□□ -1.82
Pcdh1-203ENSMUST00000160721 Gm11568A2A4M2 211 aa3.57□□□□□ -1.84
Pcdh1-203ENSMUST00000160721 Krtap9-1Q64526 186 aa3.57□□□□□ -1.84
Pcdh1-203ENSMUST00000160721 Gm11639A0A1D5RLM8 5808 aa3.53□□□□□ -1.84
Pcdh1-203ENSMUST00000160721 Gpr98Q8VHN7 6298 aaKnown RBP3.52□□□□□ -1.85
Pcdh1-203ENSMUST00000160721 1110025L11RikO09048 78 aa3.37□□□□□ -1.87
Pcdh1-203ENSMUST00000160721 Krtap6-5Q925H3 78 aa3.37□□□□□ -1.87
Pcdh1-203ENSMUST00000160721 Hmcn1D3YXG0 5634 aa3.28□□□□□ -1.88
Pcdh1-203ENSMUST00000160721 Krtap5-2Q9D5Z7 189 aa3.25□□□□□ -1.89
Pcdh1-203ENSMUST00000160721 Gm10229O08631 77 aa3.18□□□□□ -1.9
Pcdh1-203ENSMUST00000160721 Gm4553A0A1B0GSA9 284 aa3.09□□□□□ -1.92
Pcdh1-203ENSMUST00000160721 Phgr1Q8K0G7 91 aa3.07□□□□□ -1.92
Pcdh1-203ENSMUST00000160721 Gm2431E9Q8S1 172 aa2.98□□□□□ -1.93
Pcdh1-203ENSMUST00000160721 A030005L19RikA0A1Y7VIU2 113 aa2.91□□□□□ -1.94
Pcdh1-203ENSMUST00000160721 AhnakE9Q616 5656 aaKnown RBP2.9□□□□□ -1.94
Pcdh1-203ENSMUST00000160721 Gm10153A0A1B0GRL1 320 aa2.76□□□□□ -1.97
Pcdh1-203ENSMUST00000160721 Gm45337A0A1B0GS71 263 aa2.68□□□□□ -1.98
Pcdh1-203ENSMUST00000160721 Krtap6-2O08884 159 aa2.62□□□□□ -1.99
Pcdh1-203ENSMUST00000160721 Gm40460A0A1B0GR10 244 aa2.61□□□□□ -1.99
Pcdh1-203ENSMUST00000160721 Gm7579A0A1B0GRJ4 243 aa2.61□□□□□ -1.99
Pcdh1-203ENSMUST00000160721 Krtap5-5Q2TA51 241 aa2.61□□□□□ -1.99
Pcdh1-203ENSMUST00000160721 Krtap5-4Q62220 223 aa2.61□□□□□ -1.99
Pcdh1-203ENSMUST00000160721 A0A1Y7VJH8 109 aa2.61□□□□□ -1.99
Pcdh1-203ENSMUST00000160721 Gm39115A0A1B0GSH7 232 aa2.49□□□□□ -2.01
Pcdh1-203ENSMUST00000160721 Gm11567Q9D141 195 aa2.46□□□□□ -2.02
Pcdh1-203ENSMUST00000160721 Krtap21-1Q925H4 128 aa2.41□□□□□ -2.02
Pcdh1-203ENSMUST00000160721 Gm45618A0A1B0GSA0 219 aa2.34□□□□□ -2.04
Pcdh1-203ENSMUST00000160721 A0A1Y7VLE6 161 aa1.96□□□□□ -2.1
Pcdh1-203ENSMUST00000160721 Gm29735A0A1B0GT06 219 aa1.93□□□□□ -2.1
Pcdh1-203ENSMUST00000160721 Krtap5-1Q64507 230 aa1.69□□□□□ -2.14
Pcdh1-203ENSMUST00000160721 A0A1Y7VJ07 166 aa1.43□□□□□ -2.18
Pcdh1-203ENSMUST00000160721 A030003K21RikA0A1Y7VIM3 128 aa1.23□□□□□ -2.21
Pcdh1-203ENSMUST00000160721 A0A286YCP9 139 aa1.13□□□□□ -2.23
Pcdh1-203ENSMUST00000160721 Gm4559A4IF42 199 aa1.05□□□□□ -2.24
Pcdh1-203ENSMUST00000160721 Gm6217A0A1Y7VJK9 128 aa0.93□□□□□ -2.26
Pcdh1-203ENSMUST00000160721 Krtap28-10A0A1Y7VP58 119 aa0.91□□□□□ -2.26
Pcdh1-203ENSMUST00000160721 A030014E15RikA0A1Y7VJV2 120 aa0.67□□□□□ -2.3
Pcdh1-203ENSMUST00000160721 Krtap28-13A0A087WQP5 138 aa0.59□□□□□ -2.32
Pcdh1-203ENSMUST00000160721 A030005K14RikA0A1Y7VNY1 122 aa0.58□□□□□ -2.32
Pcdh1-203ENSMUST00000160721 Gm7544A0A1Y7VJ58 118 aa0.47□□□□□ -2.33
Retrieved 80 of 22,080 RNA–protein pairs in 147.1 ms