RNA–Protein interactions for RNA: ENSMUST00000159592.7

Ssh1-204, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ssh1, Length 8,436 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-204ENSMUST00000159592 Mdn1A2ANY6 5589 aaKnown RBP3.9□□□□□ -1.79
Ssh1-204ENSMUST00000159592 Krtap4-16Q91W93 202 aa3.89□□□□□ -1.79
Ssh1-204ENSMUST00000159592 Gm11562A0PK51 136 aa3.88□□□□□ -1.79
Ssh1-204ENSMUST00000159592 4932415D10RikA0A1W2P6U8 4986 aa3.86□□□□□ -1.79
Ssh1-204ENSMUST00000159592 Krtap4-2B1AQ85 167 aa3.83□□□□□ -1.8
Ssh1-204ENSMUST00000159592 Krtap4-1Q3UUY3 169 aa3.78□□□□□ -1.8
Ssh1-204ENSMUST00000159592 2300003K06RikA2A4M0 262 aa3.75□□□□□ -1.81
Ssh1-204ENSMUST00000159592 Syne2Q6ZWQ0 6874 aaKnown RBP3.73□□□□□ -1.81
Ssh1-204ENSMUST00000159592 Lce1kJ3QP15 125 aa3.72□□□□□ -1.81
Ssh1-204ENSMUST00000159592 Fat4Q2PZL6 4981 aa3.7□□□□□ -1.82
Ssh1-204ENSMUST00000159592 Fsip2A2ARZ3 6995 aa3.69□□□□□ -1.82
Ssh1-204ENSMUST00000159592 Krtap4-7Q9D732 168 aa3.68□□□□□ -1.82
Ssh1-204ENSMUST00000159592 Krtap4-9B1AQA9 244 aa3.68□□□□□ -1.82
Ssh1-204ENSMUST00000159592 Gm11564A2A4L9 201 aa3.67□□□□□ -1.82
Ssh1-204ENSMUST00000159592 Gm11563B1AQ90 168 aa3.67□□□□□ -1.82
Ssh1-204ENSMUST00000159592 Gm11595B1AQA7 289 aa3.67□□□□□ -1.82
Ssh1-204ENSMUST00000159592 Krtap4-8B1AQA8 209 aa3.67□□□□□ -1.82
Ssh1-204ENSMUST00000159592 Lce1a1Q9CQH5 143 aa3.65□□□□□ -1.83
Ssh1-204ENSMUST00000159592 Gm11596B1AQB0 205 aa3.64□□□□□ -1.83
Ssh1-204ENSMUST00000159592 Krtap4-13Q9D7P3 165 aa3.61□□□□□ -1.83
Ssh1-204ENSMUST00000159592 Mt3P28184 68 aa3.56□□□□□ -1.84
Ssh1-204ENSMUST00000159592 Muc16A0A140LJ72 8478 aa3.55□□□□□ -1.84
Ssh1-204ENSMUST00000159592 Rnf213E9Q555 5152 aaKnown RBP3.53□□□□□ -1.84
Ssh1-204ENSMUST00000159592 Ush2AQ2QI47 5193 aa3.51□□□□□ -1.85
Ssh1-204ENSMUST00000159592 Muc5bE9Q5I3 4800 aa3.51□□□□□ -1.85
Ssh1-204ENSMUST00000159592 Mt1P02802 61 aaKnown RBP3.37□□□□□ -1.87
Ssh1-204ENSMUST00000159592 Sprr2bO70554 98 aa3.3□□□□□ -1.88
Ssh1-204ENSMUST00000159592 SspoQ8CG65 4998 aa3.27□□□□□ -1.89
Ssh1-204ENSMUST00000159592 Krtap31-2Q8CAY5 177 aa3.22□□□□□ -1.89
Ssh1-204ENSMUST00000159592 Gm11554B1AQB2 190 aa3.22□□□□□ -1.89
Ssh1-204ENSMUST00000159592 Krtap20-2E9Q0A8 60 aa3.17□□□□□ -1.9
Ssh1-204ENSMUST00000159592 ObscnA2AAJ9 8891 aaKnown RBP3.16□□□□□ -1.9
Ssh1-204ENSMUST00000159592 Krtap6-3A0A087WQL6 57 aa3.09□□□□□ -1.91
Ssh1-204ENSMUST00000159592 Macf1Q9QXZ0 7354 aaKnown RBP2.87□□□□□ -1.95
Ssh1-204ENSMUST00000159592 Muc19Q6PZE0 7524 aa2.86□□□□□ -1.95
Ssh1-204ENSMUST00000159592 1110025L11RikO09048 78 aa2.8□□□□□ -1.96
Ssh1-204ENSMUST00000159592 Krtap6-5Q925H3 78 aa2.8□□□□□ -1.96
Ssh1-204ENSMUST00000159592 Gm11555B1AQ89 175 aa2.76□□□□□ -1.97
Ssh1-204ENSMUST00000159592 DstQ91ZU6 7393 aaKnown RBP2.73□□□□□ -1.97
Ssh1-204ENSMUST00000159592 NebE9Q1W3 7152 aa2.69□□□□□ -1.98
Ssh1-204ENSMUST00000159592 Gm10229O08631 77 aa2.64□□□□□ -1.99
Ssh1-204ENSMUST00000159592 Gm11568A2A4M2 211 aa2.63□□□□□ -1.99
Ssh1-204ENSMUST00000159592 Krtap9-1Q64526 186 aa2.63□□□□□ -1.99
Ssh1-204ENSMUST00000159592 Phgr1Q8K0G7 91 aa2.61□□□□□ -1.99
Ssh1-204ENSMUST00000159592 Gm11559Q9D3H7 191 aa2.45□□□□□ -2.02
Ssh1-204ENSMUST00000159592 Kmt2dQ6PDK2 5588 aa2.44□□□□□ -2.02
Ssh1-204ENSMUST00000159592 Krtap5-2Q9D5Z7 189 aa2.23□□□□□ -2.05
Ssh1-204ENSMUST00000159592 Eppk1Q8R0W0 6548 aa2.15□□□□□ -2.07
Ssh1-204ENSMUST00000159592 Krtap6-2O08884 159 aa2.1□□□□□ -2.07
Ssh1-204ENSMUST00000159592 Hmcn1D3YXG0 5634 aa2.09□□□□□ -2.08
Ssh1-204ENSMUST00000159592 Gm11567Q9D141 195 aa2.05□□□□□ -2.08
Ssh1-204ENSMUST00000159592 Gm4553A0A1B0GSA9 284 aa2.03□□□□□ -2.08
Ssh1-204ENSMUST00000159592 Krtap21-1Q925H4 128 aa2.02□□□□□ -2.09
Ssh1-204ENSMUST00000159592 Gm10153A0A1B0GRL1 320 aa1.99□□□□□ -2.09
Ssh1-204ENSMUST00000159592 Gm2431E9Q8S1 172 aa1.94□□□□□ -2.1
Ssh1-204ENSMUST00000159592 Gm11639A0A1D5RLM8 5808 aa1.81□□□□□ -2.12
Ssh1-204ENSMUST00000159592 Gm45337A0A1B0GS71 263 aa1.79□□□□□ -2.12
Ssh1-204ENSMUST00000159592 Gm40460A0A1B0GR10 244 aa1.72□□□□□ -2.13
Ssh1-204ENSMUST00000159592 Gm7579A0A1B0GRJ4 243 aa1.72□□□□□ -2.13
Ssh1-204ENSMUST00000159592 Krtap5-5Q2TA51 241 aa1.72□□□□□ -2.13
Ssh1-204ENSMUST00000159592 Krtap5-4Q62220 223 aa1.72□□□□□ -2.13
Ssh1-204ENSMUST00000159592 AhnakE9Q616 5656 aaKnown RBP1.68□□□□□ -2.14
Ssh1-204ENSMUST00000159592 Gpr98Q8VHN7 6298 aaKnown RBP1.68□□□□□ -2.14
Ssh1-204ENSMUST00000159592 A030005L19RikA0A1Y7VIU2 113 aa1.68□□□□□ -2.14
Ssh1-204ENSMUST00000159592 A0A1Y7VJH8 109 aa1.63□□□□□ -2.15
Ssh1-204ENSMUST00000159592 Gm39115A0A1B0GSH7 232 aa1.6□□□□□ -2.15
Ssh1-204ENSMUST00000159592 A0A1Y7VLE6 161 aa1.48□□□□□ -2.17
Ssh1-204ENSMUST00000159592 Krtap28-10A0A1Y7VP58 119 aa1.44□□□□□ -2.18
Ssh1-204ENSMUST00000159592 A030003K21RikA0A1Y7VIM3 128 aa1.4□□□□□ -2.18
Ssh1-204ENSMUST00000159592 Krtap28-13A0A087WQP5 138 aa1.39□□□□□ -2.19
Ssh1-204ENSMUST00000159592 A0A1Y7VJ07 166 aa1.33□□□□□ -2.2
Ssh1-204ENSMUST00000159592 A030005K14RikA0A1Y7VNY1 122 aa1.33□□□□□ -2.2
Ssh1-204ENSMUST00000159592 Gm6217A0A1Y7VJK9 128 aa1.32□□□□□ -2.2
Ssh1-204ENSMUST00000159592 Gm29735A0A1B0GT06 219 aa1.31□□□□□ -2.2
Ssh1-204ENSMUST00000159592 A030014E15RikA0A1Y7VJV2 120 aa1.29□□□□□ -2.2
Ssh1-204ENSMUST00000159592 Gm45618A0A1B0GSA0 219 aa1.21□□□□□ -2.22
Ssh1-204ENSMUST00000159592 Gm7544A0A1Y7VJ58 118 aa1.19□□□□□ -2.22
Ssh1-204ENSMUST00000159592 A0A286YCP9 139 aa1.04□□□□□ -2.24
Ssh1-204ENSMUST00000159592 Krtap5-1Q64507 230 aa1.04□□□□□ -2.24
Ssh1-204ENSMUST00000159592 Gm4559A4IF42 199 aa0.63□□□□□ -2.31
Retrieved 80 of 22,080 RNA–protein pairs in 51.8 ms