RNA–Protein interactions for RNA: ENSMUST00000132214.7

Ccdc38-203, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc38, Length 2,222 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-203ENSMUST00000132214 Syne2Q6ZWQ0 6874 aaKnown RBP2.86□□□□□ -1.95
Ccdc38-203ENSMUST00000132214 Krtap1-4Q3V2D6 188 aa2.85□□□□□ -1.95
Ccdc38-203ENSMUST00000132214 Tnp1P10856 55 aa2.84□□□□□ -1.95
Ccdc38-203ENSMUST00000132214 Gm45337A0A1B0GS71 263 aa2.82□□□□□ -1.96
Ccdc38-203ENSMUST00000132214 Gm11596B1AQB0 205 aa2.8□□□□□ -1.96
Ccdc38-203ENSMUST00000132214 SspoQ8CG65 4998 aa2.8□□□□□ -1.96
Ccdc38-203ENSMUST00000132214 Krtap19-3Q925H6 87 aa2.78□□□□□ -1.96
Ccdc38-203ENSMUST00000132214 BC029722A0A0N4SW31 51 aa2.77□□□□□ -1.97
Ccdc38-203ENSMUST00000132214 Gm10318A0A1W2P728 225 aa2.77□□□□□ -1.97
Ccdc38-203ENSMUST00000132214 Krtap16-3Q8C1I6 86 aa2.77□□□□□ -1.97
Ccdc38-203ENSMUST00000132214 Krtap19-1Q925H2 87 aa2.77□□□□□ -1.97
Ccdc38-203ENSMUST00000132214 Krtap5-1Q64507 230 aa2.72□□□□□ -1.97
Ccdc38-203ENSMUST00000132214 Krtap4-6Q3V4B7 195 aa2.72□□□□□ -1.97
Ccdc38-203ENSMUST00000132214 2310046K23RikA0A0A6YVW6 87 aa2.71□□□□□ -1.98
Ccdc38-203ENSMUST00000132214 Muc5bE9Q5I3 4800 aa2.71□□□□□ -1.98
Ccdc38-203ENSMUST00000132214 Gm10153A0A1B0GRL1 320 aa2.7□□□□□ -1.98
Ccdc38-203ENSMUST00000132214 Krtap5-4Q62220 223 aa2.69□□□□□ -1.98
Ccdc38-203ENSMUST00000132214 4933428G20RikQ9D3X4 101 aa2.65□□□□□ -1.99
Ccdc38-203ENSMUST00000132214 Mdn1A2ANY6 5589 aaKnown RBP2.65□□□□□ -1.99
Ccdc38-203ENSMUST00000132214 Spink7Q6IE32 76 aa2.64□□□□□ -1.99
Ccdc38-203ENSMUST00000132214 Gm11564A2A4L9 201 aa2.62□□□□□ -1.99
Ccdc38-203ENSMUST00000132214 Krtap4-8B1AQA8 209 aa2.62□□□□□ -1.99
Ccdc38-203ENSMUST00000132214 Gm4559A4IF42 199 aa2.6□□□□□ -1.99
Ccdc38-203ENSMUST00000132214 Gm11568A2A4M2 211 aa2.57□□□□□ -2
Ccdc38-203ENSMUST00000132214 Krtap19-2Q925I0 141 aa2.53□□□□□ -2
Ccdc38-203ENSMUST00000132214 Krtap9-3Q3V2C1 136 aa2.53□□□□□ -2
Ccdc38-203ENSMUST00000132214 Krtap6-3A0A087WQL6 57 aa2.49□□□□□ -2.01
Ccdc38-203ENSMUST00000132214 Mt4P47945 62 aa2.48□□□□□ -2.01
Ccdc38-203ENSMUST00000132214 Gm4553A0A1B0GSA9 284 aa2.47□□□□□ -2.01
Ccdc38-203ENSMUST00000132214 Krtap19-9aF8WH65 55 aa2.46□□□□□ -2.02
Ccdc38-203ENSMUST00000132214 Fsip2A2ARZ3 6995 aa2.46□□□□□ -2.02
Ccdc38-203ENSMUST00000132214 Sprr2iO70560 76 aa2.45□□□□□ -2.02
Ccdc38-203ENSMUST00000132214 Lce1a2Q9D1K4 149 aa2.45□□□□□ -2.02
Ccdc38-203ENSMUST00000132214 Lce1iQ9D6P5 149 aa2.45□□□□□ -2.02
Ccdc38-203ENSMUST00000132214 Gm6358A0A087WPH4 74 aa2.44□□□□□ -2.02
Ccdc38-203ENSMUST00000132214 Sprr2kO70562 68 aa2.41□□□□□ -2.02
Ccdc38-203ENSMUST00000132214 Krtap5-5Q2TA51 241 aa2.37□□□□□ -2.03
Ccdc38-203ENSMUST00000132214 Sprr2gO70558 76 aa2.36□□□□□ -2.03
Ccdc38-203ENSMUST00000132214 Gpr98Q8VHN7 6298 aaKnown RBP2.35□□□□□ -2.03
Ccdc38-203ENSMUST00000132214 Krtap8-1O08633 61 aa2.32□□□□□ -2.04
Ccdc38-203ENSMUST00000132214 Lce3dE9Q8V1 98 aa2.3□□□□□ -2.04
Ccdc38-203ENSMUST00000132214 Lce3aQ497I5 98 aa2.3□□□□□ -2.04
Ccdc38-203ENSMUST00000132214 Sprr2fO70557 76 aa2.29□□□□□ -2.04
Ccdc38-203ENSMUST00000132214 Gm11938Q9D3H4 131 aa2.29□□□□□ -2.04
Ccdc38-203ENSMUST00000132214 Krtap20-2E9Q0A8 60 aa2.27□□□□□ -2.05
Ccdc38-203ENSMUST00000132214 Mt2P02798 61 aa2.27□□□□□ -2.05
Ccdc38-203ENSMUST00000132214 Sprr2dO70555 85 aa2.27□□□□□ -2.05
Ccdc38-203ENSMUST00000132214 Krtap19-9bQ99NG9 58 aa2.26□□□□□ -2.05
Ccdc38-203ENSMUST00000132214 Gm40460A0A1B0GR10 244 aa2.23□□□□□ -2.05
Ccdc38-203ENSMUST00000132214 Eppk1Q8R0W0 6548 aa2.21□□□□□ -2.06
Ccdc38-203ENSMUST00000132214 Krtap22-2J3QNX6 67 aa2.19□□□□□ -2.06
Ccdc38-203ENSMUST00000132214 Krtap5-2Q9D5Z7 189 aa2.18□□□□□ -2.06
Ccdc38-203ENSMUST00000132214 Sprr2eO70556 76 aa2.16□□□□□ -2.06
Ccdc38-203ENSMUST00000132214 Lce3fQ6PAI4 98 aa2.09□□□□□ -2.08
Ccdc38-203ENSMUST00000132214 Lce3cQ91V05 98 aa2.09□□□□□ -2.08
Ccdc38-203ENSMUST00000132214 Gm11639A0A1D5RLM8 5808 aa2.04□□□□□ -2.08
Ccdc38-203ENSMUST00000132214 Gm10024A0A0A0MQA4 119 aa2.03□□□□□ -2.08
Ccdc38-203ENSMUST00000132214 Gm7579A0A1B0GRJ4 243 aa2.03□□□□□ -2.08
Ccdc38-203ENSMUST00000132214 Gm10229O08631 77 aa2.01□□□□□ -2.09
Ccdc38-203ENSMUST00000132214 Sprr2hO70559 108 aa2□□□□□ -2.09
Ccdc38-203ENSMUST00000132214 Kmt2dQ6PDK2 5588 aa2□□□□□ -2.09
Ccdc38-203ENSMUST00000132214 Krtap19-4Q925H7 84 aa1.99□□□□□ -2.09
Ccdc38-203ENSMUST00000132214 Macf1Q9QXZ0 7354 aaKnown RBP1.95□□□□□ -2.1
Ccdc38-203ENSMUST00000132214 Syne1Q6ZWR6 8799 aa1.94□□□□□ -2.1
Ccdc38-203ENSMUST00000132214 Lce3eF8VQJ0 98 aa1.9□□□□□ -2.11
Ccdc38-203ENSMUST00000132214 Muc19Q6PZE0 7524 aa1.89□□□□□ -2.11
Ccdc38-203ENSMUST00000132214 Krtap4-16Q91W93 202 aa1.87□□□□□ -2.11
Ccdc38-203ENSMUST00000132214 Lce3bQ9CQM7 98 aa1.87□□□□□ -2.11
Ccdc38-203ENSMUST00000132214 DstQ91ZU6 7393 aaKnown RBP1.83□□□□□ -2.12
Ccdc38-203ENSMUST00000132214 ObscnA2AAJ9 8891 aaKnown RBP1.76□□□□□ -2.13
Ccdc38-203ENSMUST00000132214 NebE9Q1W3 7152 aa1.75□□□□□ -2.13
Ccdc38-203ENSMUST00000132214 Mt1P02802 61 aaKnown RBP1.7□□□□□ -2.14
Ccdc38-203ENSMUST00000132214 AhnakE9Q616 5656 aaKnown RBP1.65□□□□□ -2.15
Ccdc38-203ENSMUST00000132214 Krtap6-5Q925H3 78 aa1.48□□□□□ -2.17
Ccdc38-203ENSMUST00000132214 Muc16A0A140LJ72 8478 aa1.43□□□□□ -2.18
Ccdc38-203ENSMUST00000132214 Krtap21-1Q925H4 128 aa1.42□□□□□ -2.18
Ccdc38-203ENSMUST00000132214 1110025L11RikO09048 78 aa1.39□□□□□ -2.19
Ccdc38-203ENSMUST00000132214 Sprr2bO70554 98 aa1.38□□□□□ -2.19
Ccdc38-203ENSMUST00000132214 Krtap6-2O08884 159 aa1.31□□□□□ -2.2
Ccdc38-203ENSMUST00000132214 Phgr1Q8K0G7 91 aa1.16□□□□□ -2.22
Retrieved 80 of 22,080 RNA–protein pairs in 70.8 ms