RNA–Protein interactions for RNA: ENSMUST00000126429.7

Ccdc171-204, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc171, Length 1,388 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-204ENSMUST00000126429 Lce1a2Q9D1K4 149 aa6.06□□□□□ -1.44
Ccdc171-204ENSMUST00000126429 Gm3880A0A1B0GSB3 72 aa6.06□□□□□ -1.44
Ccdc171-204ENSMUST00000126429 Gm11554B1AQB2 190 aa6.04□□□□□ -1.44
Ccdc171-204ENSMUST00000126429 Gm17402F6Z0L5 76 aa6□□□□□ -1.45
Ccdc171-204ENSMUST00000126429 2300003K06RikA2A4M0 262 aa5.99□□□□□ -1.45
Ccdc171-204ENSMUST00000126429 Gm11567Q9D141 195 aa5.99□□□□□ -1.45
Ccdc171-204ENSMUST00000126429 Gm45618A0A1B0GSA0 219 aa5.96□□□□□ -1.45
Ccdc171-204ENSMUST00000126429 Mt2P02798 61 aa5.96□□□□□ -1.45
Ccdc171-204ENSMUST00000126429 Sprr2a3Q4KL71 83 aa5.96□□□□□ -1.45
Ccdc171-204ENSMUST00000126429 Sprr2a1Q9CQK8 83 aa5.96□□□□□ -1.45
Ccdc171-204ENSMUST00000126429 Gm12216A0A1W2P827 62 aa5.94□□□□□ -1.46
Ccdc171-204ENSMUST00000126429 Gm39115A0A1B0GSH7 232 aa5.93□□□□□ -1.46
Ccdc171-204ENSMUST00000126429 Romo1P60603 79 aa5.9□□□□□ -1.47
Ccdc171-204ENSMUST00000126429 Krtap8-1O08633 61 aa5.83□□□□□ -1.48
Ccdc171-204ENSMUST00000126429 Krtap20-2E9Q0A8 60 aa5.81□□□□□ -1.48
Ccdc171-204ENSMUST00000126429 Gm29735A0A1B0GT06 219 aa5.79□□□□□ -1.48
Ccdc171-204ENSMUST00000126429 Sprr2gO70558 76 aa5.76□□□□□ -1.49
Ccdc171-204ENSMUST00000126429 Krtap22-2J3QNX6 67 aa5.67□□□□□ -1.5
Ccdc171-204ENSMUST00000126429 2310046K23RikA0A0A6YVW6 87 aa5.64□□□□□ -1.51
Ccdc171-204ENSMUST00000126429 Gm10142J3KMP7 120 aa5.5□□□□□ -1.53
Ccdc171-204ENSMUST00000126429 Krtap19-9bQ99NG9 58 aa5.48□□□□□ -1.53
Ccdc171-204ENSMUST00000126429 Gm40193A0A1B0GT39 78 aa5.47□□□□□ -1.53
Ccdc171-204ENSMUST00000126429 Camk2n1Q6QWF9 78 aa5.45□□□□□ -1.54
Ccdc171-204ENSMUST00000126429 Eppk1Q8R0W0 6548 aa5.42□□□□□ -1.54
Ccdc171-204ENSMUST00000126429 Mp68P56379 58 aa5.33□□□□□ -1.56
Ccdc171-204ENSMUST00000126429 Krtap7-1Q9D3I6 87 aa5.32□□□□□ -1.56
Ccdc171-204ENSMUST00000126429 Gm10153A0A1B0GRL1 320 aa5.24□□□□□ -1.57
Ccdc171-204ENSMUST00000126429 Gm11639A0A1D5RLM8 5808 aa5.16□□□□□ -1.58
Ccdc171-204ENSMUST00000126429 Krtap5-2Q9D5Z7 189 aa5.16□□□□□ -1.58
Ccdc171-204ENSMUST00000126429 Gm20538F6Z9R1 75 aa5.1□□□□□ -1.59
Ccdc171-204ENSMUST00000126429 Tnp1P10856 55 aa5.08□□□□□ -1.6
Ccdc171-204ENSMUST00000126429 Sprr2iO70560 76 aa5.06□□□□□ -1.6
Ccdc171-204ENSMUST00000126429 Mt3P28184 68 aa5.06□□□□□ -1.6
Ccdc171-204ENSMUST00000126429 Gm10272F7CZ33 110 aa5.05□□□□□ -1.6
Ccdc171-204ENSMUST00000126429 Kmt2dQ6PDK2 5588 aa5.02□□□□□ -1.61
Ccdc171-204ENSMUST00000126429 Gm4553A0A1B0GSA9 284 aa5□□□□□ -1.61
Ccdc171-204ENSMUST00000126429 Macf1Q9QXZ0 7354 aaKnown RBP4.99□□□□□ -1.61
Ccdc171-204ENSMUST00000126429 Krtap5-4Q62220 223 aa4.96□□□□□ -1.62
Ccdc171-204ENSMUST00000126429 Gpr98Q8VHN7 6298 aaKnown RBP4.93□□□□□ -1.62
Ccdc171-204ENSMUST00000126429 Gm45337A0A1B0GS71 263 aa4.89□□□□□ -1.63
Ccdc171-204ENSMUST00000126429 Gm11568A2A4M2 211 aa4.89□□□□□ -1.63
Ccdc171-204ENSMUST00000126429 Krtap9-1Q64526 186 aa4.89□□□□□ -1.63
Ccdc171-204ENSMUST00000126429 Syne1Q6ZWR6 8799 aa4.87□□□□□ -1.63
Ccdc171-204ENSMUST00000126429 Muc19Q6PZE0 7524 aa4.84□□□□□ -1.63
Ccdc171-204ENSMUST00000126429 Lce3bQ9CQM7 98 aa4.83□□□□□ -1.64
Ccdc171-204ENSMUST00000126429 Ndufaf8A2AMZ4 74 aa4.78□□□□□ -1.64
Ccdc171-204ENSMUST00000126429 Krtap4-16Q91W93 202 aa4.56□□□□□ -1.68
Ccdc171-204ENSMUST00000126429 Hmcn1D3YXG0 5634 aa4.55□□□□□ -1.68
Ccdc171-204ENSMUST00000126429 Gm11938Q9D3H4 131 aa4.54□□□□□ -1.68
Ccdc171-204ENSMUST00000126429 Krtap19-4Q925H7 84 aa4.53□□□□□ -1.69
Ccdc171-204ENSMUST00000126429 Gm40460A0A1B0GR10 244 aa4.51□□□□□ -1.69
Ccdc171-204ENSMUST00000126429 Gm7579A0A1B0GRJ4 243 aa4.51□□□□□ -1.69
Ccdc171-204ENSMUST00000126429 Krtap5-5Q2TA51 241 aa4.51□□□□□ -1.69
Ccdc171-204ENSMUST00000126429 Mt1P02802 61 aaKnown RBP4.48□□□□□ -1.69
Ccdc171-204ENSMUST00000126429 NebE9Q1W3 7152 aa4.44□□□□□ -1.7
Ccdc171-204ENSMUST00000126429 DstQ91ZU6 7393 aaKnown RBP4.43□□□□□ -1.7
Ccdc171-204ENSMUST00000126429 Sprr2fO70557 76 aa4.39□□□□□ -1.71
Ccdc171-204ENSMUST00000126429 Lce3cQ91V05 98 aa4.36□□□□□ -1.71
Ccdc171-204ENSMUST00000126429 Lce3dE9Q8V1 98 aa4.29□□□□□ -1.72
Ccdc171-204ENSMUST00000126429 Sprr2dO70555 85 aa4.27□□□□□ -1.73
Ccdc171-204ENSMUST00000126429 4933428G20RikQ9D3X4 101 aa4.23□□□□□ -1.73
Ccdc171-204ENSMUST00000126429 Gm9112A2AI92 75 aa4.22□□□□□ -1.73
Ccdc171-204ENSMUST00000126429 Lce3eF8VQJ0 98 aa4.18□□□□□ -1.74
Ccdc171-204ENSMUST00000126429 Lce3fQ6PAI4 98 aa4.18□□□□□ -1.74
Ccdc171-204ENSMUST00000126429 ObscnA2AAJ9 8891 aaKnown RBP4.16□□□□□ -1.74
Ccdc171-204ENSMUST00000126429 AhnakE9Q616 5656 aaKnown RBP4.12□□□□□ -1.75
Ccdc171-204ENSMUST00000126429 Krtap5-1Q64507 230 aa4.04□□□□□ -1.76
Ccdc171-204ENSMUST00000126429 Lce3aQ497I5 98 aa4□□□□□ -1.77
Ccdc171-204ENSMUST00000126429 Gm4559A4IF42 199 aa3.81□□□□□ -1.8
Ccdc171-204ENSMUST00000126429 Sprr2hO70559 108 aa3.67□□□□□ -1.82
Ccdc171-204ENSMUST00000126429 Sprr2eO70556 76 aa3.62□□□□□ -1.83
Ccdc171-204ENSMUST00000126429 Gm10024A0A0A0MQA4 119 aa3.52□□□□□ -1.85
Ccdc171-204ENSMUST00000126429 Muc16A0A140LJ72 8478 aa3.27□□□□□ -1.89
Ccdc171-204ENSMUST00000126429 1110025L11RikO09048 78 aa3.23□□□□□ -1.89
Ccdc171-204ENSMUST00000126429 Krtap6-5Q925H3 78 aa3.23□□□□□ -1.89
Ccdc171-204ENSMUST00000126429 Gm10229O08631 77 aa2.97□□□□□ -1.93
Ccdc171-204ENSMUST00000126429 Sprr2bO70554 98 aa2.72□□□□□ -1.97
Ccdc171-204ENSMUST00000126429 Krtap21-1Q925H4 128 aa2.62□□□□□ -1.99
Ccdc171-204ENSMUST00000126429 Krtap6-2O08884 159 aa2.57□□□□□ -2
Ccdc171-204ENSMUST00000126429 Phgr1Q8K0G7 91 aa2.17□□□□□ -2.06
Retrieved 80 of 22,080 RNA–protein pairs in 93.2 ms