RNA–Protein interactions for RNA: ENSMUST00000118242.7

Limch1-204, Transcript of LIM and calponin homology domains-containing protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Limch1, Length 5,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1-204ENSMUST00000118242 Gm11569B1AQB1 180 aa3.26□□□□□ -1.89
Limch1-204ENSMUST00000118242 Abca13Q5SSE9 5034 aa3.24□□□□□ -1.89
Limch1-204ENSMUST00000118242 4932415D10RikA0A1W2P6U8 4986 aa3.17□□□□□ -1.9
Limch1-204ENSMUST00000118242 Mt4P47945 62 aa3.17□□□□□ -1.9
Limch1-204ENSMUST00000118242 Mt1P02802 61 aaKnown RBP3.16□□□□□ -1.9
Limch1-204ENSMUST00000118242 2300003K06RikA2A4M0 262 aa3.13□□□□□ -1.91
Limch1-204ENSMUST00000118242 Mt3P28184 68 aa3.13□□□□□ -1.91
Limch1-204ENSMUST00000118242 Fat4Q2PZL6 4981 aa3.13□□□□□ -1.91
Limch1-204ENSMUST00000118242 ZanO88799 5376 aa3.11□□□□□ -1.91
Limch1-204ENSMUST00000118242 Krtap4-6Q3V4B7 195 aa3.07□□□□□ -1.92
Limch1-204ENSMUST00000118242 Lce1kJ3QP15 125 aa3.06□□□□□ -1.92
Limch1-204ENSMUST00000118242 Muc5bE9Q5I3 4800 aa3.06□□□□□ -1.92
Limch1-204ENSMUST00000118242 Rnf213E9Q555 5152 aaKnown RBP3.05□□□□□ -1.92
Limch1-204ENSMUST00000118242 Muc16A0A140LJ72 8478 aa3.02□□□□□ -1.93
Limch1-204ENSMUST00000118242 Sprr2bO70554 98 aa3.02□□□□□ -1.93
Limch1-204ENSMUST00000118242 Krtap4-2B1AQ85 167 aa2.98□□□□□ -1.93
Limch1-204ENSMUST00000118242 Krtap4-1Q3UUY3 169 aa2.92□□□□□ -1.94
Limch1-204ENSMUST00000118242 ObscnA2AAJ9 8891 aaKnown RBP2.92□□□□□ -1.94
Limch1-204ENSMUST00000118242 Krtap4-7Q9D732 168 aa2.88□□□□□ -1.95
Limch1-204ENSMUST00000118242 Krtap4-9B1AQA9 244 aa2.86□□□□□ -1.95
Limch1-204ENSMUST00000118242 Fsip2A2ARZ3 6995 aa2.86□□□□□ -1.95
Limch1-204ENSMUST00000118242 Gm11564A2A4L9 201 aa2.85□□□□□ -1.95
Limch1-204ENSMUST00000118242 Gm11563B1AQ90 168 aa2.85□□□□□ -1.95
Limch1-204ENSMUST00000118242 Gm11595B1AQA7 289 aa2.85□□□□□ -1.95
Limch1-204ENSMUST00000118242 Krtap4-8B1AQA8 209 aa2.85□□□□□ -1.95
Limch1-204ENSMUST00000118242 Ush2AQ2QI47 5193 aa2.84□□□□□ -1.95
Limch1-204ENSMUST00000118242 SspoQ8CG65 4998 aa2.83□□□□□ -1.96
Limch1-204ENSMUST00000118242 Gm11596B1AQB0 205 aa2.82□□□□□ -1.96
Limch1-204ENSMUST00000118242 Krtap4-13Q9D7P3 165 aa2.8□□□□□ -1.96
Limch1-204ENSMUST00000118242 Syne2Q6ZWQ0 6874 aaKnown RBP2.74□□□□□ -1.97
Limch1-204ENSMUST00000118242 1110025L11RikO09048 78 aa2.53□□□□□ -2
Limch1-204ENSMUST00000118242 Krtap6-5Q925H3 78 aa2.53□□□□□ -2
Limch1-204ENSMUST00000118242 Gm11554B1AQB2 190 aa2.52□□□□□ -2.01
Limch1-204ENSMUST00000118242 Krtap20-2E9Q0A8 60 aa2.51□□□□□ -2.01
Limch1-204ENSMUST00000118242 Macf1Q9QXZ0 7354 aaKnown RBP2.5□□□□□ -2.01
Limch1-204ENSMUST00000118242 Krtap6-3A0A087WQL6 57 aa2.45□□□□□ -2.02
Limch1-204ENSMUST00000118242 Phgr1Q8K0G7 91 aa2.41□□□□□ -2.02
Limch1-204ENSMUST00000118242 Eppk1Q8R0W0 6548 aa2.37□□□□□ -2.03
Limch1-204ENSMUST00000118242 Gm10229O08631 77 aa2.36□□□□□ -2.03
Limch1-204ENSMUST00000118242 Kmt2dQ6PDK2 5588 aa2.35□□□□□ -2.03
Limch1-204ENSMUST00000118242 DstQ91ZU6 7393 aaKnown RBP2.35□□□□□ -2.03
Limch1-204ENSMUST00000118242 Gm11568A2A4M2 211 aa2.31□□□□□ -2.04
Limch1-204ENSMUST00000118242 NebE9Q1W3 7152 aa2.29□□□□□ -2.04
Limch1-204ENSMUST00000118242 Muc19Q6PZE0 7524 aa2.28□□□□□ -2.04
Limch1-204ENSMUST00000118242 Gm11555B1AQ89 175 aa2.13□□□□□ -2.07
Limch1-204ENSMUST00000118242 Krtap9-1Q64526 186 aa2.12□□□□□ -2.07
Limch1-204ENSMUST00000118242 Gm11567Q9D141 195 aa2.07□□□□□ -2.08
Limch1-204ENSMUST00000118242 A0A1Y7VLE6 161 aa2.05□□□□□ -2.08
Limch1-204ENSMUST00000118242 Gm11559Q9D3H7 191 aa1.98□□□□□ -2.09
Limch1-204ENSMUST00000118242 Gpr98Q8VHN7 6298 aaKnown RBP1.97□□□□□ -2.09
Limch1-204ENSMUST00000118242 A030003K21RikA0A1Y7VIM3 128 aa1.91□□□□□ -2.1
Limch1-204ENSMUST00000118242 Gm11639A0A1D5RLM8 5808 aa1.91□□□□□ -2.1
Limch1-204ENSMUST00000118242 A0A1Y7VJH8 109 aa1.91□□□□□ -2.1
Limch1-204ENSMUST00000118242 Krtap28-10A0A1Y7VP58 119 aa1.86□□□□□ -2.11
Limch1-204ENSMUST00000118242 Hmcn1D3YXG0 5634 aa1.86□□□□□ -2.11
Limch1-204ENSMUST00000118242 Krtap28-13A0A087WQP5 138 aa1.85□□□□□ -2.11
Limch1-204ENSMUST00000118242 A030005K14RikA0A1Y7VNY1 122 aa1.85□□□□□ -2.11
Limch1-204ENSMUST00000118242 Krtap6-2O08884 159 aa1.85□□□□□ -2.11
Limch1-204ENSMUST00000118242 Krtap21-1Q925H4 128 aa1.83□□□□□ -2.12
Limch1-204ENSMUST00000118242 A0A1Y7VJ07 166 aa1.83□□□□□ -2.12
Limch1-204ENSMUST00000118242 Krtap5-2Q9D5Z7 189 aa1.82□□□□□ -2.12
Limch1-204ENSMUST00000118242 Gm6217A0A1Y7VJK9 128 aa1.81□□□□□ -2.12
Limch1-204ENSMUST00000118242 Gm7544A0A1Y7VJ58 118 aa1.75□□□□□ -2.13
Limch1-204ENSMUST00000118242 A030014E15RikA0A1Y7VJV2 120 aa1.69□□□□□ -2.14
Limch1-204ENSMUST00000118242 A030005L19RikA0A1Y7VIU2 113 aa1.69□□□□□ -2.14
Limch1-204ENSMUST00000118242 Gm10153A0A1B0GRL1 320 aa1.65□□□□□ -2.14
Limch1-204ENSMUST00000118242 Gm4553A0A1B0GSA9 284 aa1.64□□□□□ -2.15
Limch1-204ENSMUST00000118242 AhnakE9Q616 5656 aaKnown RBP1.56□□□□□ -2.16
Limch1-204ENSMUST00000118242 Gm2431E9Q8S1 172 aa1.51□□□□□ -2.17
Limch1-204ENSMUST00000118242 Gm40460A0A1B0GR10 244 aa1.47□□□□□ -2.17
Limch1-204ENSMUST00000118242 Gm7579A0A1B0GRJ4 243 aa1.47□□□□□ -2.17
Limch1-204ENSMUST00000118242 Krtap5-5Q2TA51 241 aa1.47□□□□□ -2.17
Limch1-204ENSMUST00000118242 Krtap5-4Q62220 223 aa1.47□□□□□ -2.17
Limch1-204ENSMUST00000118242 Gm45337A0A1B0GS71 263 aa1.46□□□□□ -2.18
Limch1-204ENSMUST00000118242 A0A286YCP9 139 aa1.42□□□□□ -2.18
Limch1-204ENSMUST00000118242 Gm39115A0A1B0GSH7 232 aa1.27□□□□□ -2.21
Limch1-204ENSMUST00000118242 Gm29735A0A1B0GT06 219 aa1.15□□□□□ -2.22
Limch1-204ENSMUST00000118242 Gm45618A0A1B0GSA0 219 aa1.14□□□□□ -2.23
Limch1-204ENSMUST00000118242 Krtap5-1Q64507 230 aa0.79□□□□□ -2.28
Limch1-204ENSMUST00000118242 Gm4559A4IF42 199 aa0.6□□□□□ -2.31
Retrieved 80 of 22,080 RNA–protein pairs in 12.6 ms